Antechinus flavipes (yellow-footed antechinus): 127557699
Help
Entry
127557699 CDS
T08818
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127557699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127557699
03019 Messenger RNA biogenesis [BR:
afz03019
]
127557699
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127557699
RNA polymerase I system
127557699
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
127557699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW2_Spt5
Spt5-NGN
KOW5_SPT5
KOW
Spt5_N
KOWx_SPT5
KOW1_SPT5
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
127557699
NCBI-ProteinID:
XP_051846964
LinkDB
All DBs
Position
3:636187002..636190958
Genome browser
AA seq
992 aa
AA seq
DB search
MKPRQSRLKVSRGGPRKVNEKGEGENSVQNQAGGRGHGQGQARSKAGAVTVRESEQSELG
PSCFWSESASEPELVRVWVRVRVRVRVWVRVRVWFRVWVRVRVRVWVRVRVRVWIWIRVW
VRVWVRQIRVWVRVRVRVWIWIRVWVRVWVRHECESESGSGSASESGCASECESESGSGS
QSESESESDGKNEDREKEENGKEQKENEEEEEEEDEEDEEDEEEEERPRKKPRHHGFILD
EAEEDDDEEEEEEAEWEVGAEDIVDRAGLPGPDSHEANPQEDRSGARRLQNAWRDQREEE
LAQYFMQKYATPASREAGRGAPRQPPDHIAQQRLLPGVRDPKLWMVKCKLGQEKATALTL
LRKFLAFRFSDSPLQIQSVVAPEYLKGYVYVEAHKLCHVLAAIQGVASLRRGCRDPKPVP
IGEMTDVLKVLRRQAPSLRPGSWVRVRAGLYKGDLAQVTRSEPGNAAVFLKMIPRIRYSR
GAPTEGFPKRKRLPRPPQKLLDTQKIRSLGGKLSRDGDFLLFRGDRYSTEGFLFKTFPPS
ALVTEGVSPALSELQHFEKRPEALQELQLRVEDEGAAERRFGAGDKVGVSAGDLINLRGR
VVGVQGPYVTVMPEHELLREPLQLPAGELRKHFEVGEHVQVLAGRYRGTTGFILKVEPNF
VLLLSDLGREELKVLPGDLRLCPDTAAPEDVWGRHRWGEMVQLSPSTVGVVVGLDADVLR
VLDMQDQVVTVPRQAVTARKDNRLAMALDSQQNNVHVRDSVRVVEGPRSGLEATVLYLFR
GIAFLRSRTLTEHGGLFACKCKHLLVPSAAQCSQGRGLSAGGLTLGPSPYPTSPRQPGPA
GRGRGRFESTSARGPGPNSRGWWGWGSRGRGSWGHGSWGHGSWGHSDHHPHKGLLGQSVR
ICQGAYKGYIGLVKNVREGVAHVELHSTCQTIFVHLQRLTPVGSSSQALWPSDLDTPTSS
SSQTPTYNSDSYSPIQAGGAWDPSVGNTPSCP
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccagacagtctcgcttgaaggtgtctcggggtggcccccgcaaggtaaacgaa
aaaggggagggggaaaatagcgttcagaaccaggcagggggccggggccatggccaaggc
caggcgagatcgaaagcaggggctgtgacggtccgggagtcagaacagtcagagctcggg
ccatcctgtttctggtccgagtccgcttctgagcctgagttagtccgggtgtgggtccgg
gtccgggtccgggtccgggtgtgggtccgggtccgggtctggttccgggtctgggtccgg
gtccgggtccgggtctgggtccgggtccgggtccgggtgtggatctggatccgggtctgg
gtccgggtctgggtccgccagatccgggtctgggtccgggtccgggtccgggtgtggatc
tggatccgggtctgggtccgggtctgggtccgccatgagtgcgagtccgaatctgggtct
ggatctgcgtctgagtctgggtgcgcgagtgagtgcgagtccgaatctgggtctggatcc
cagtcggagtcggaatcagaatcagatggaaaaaatgaagacagggagaaagaggagaac
ggaaaggagcagaaggaaaacgaggaggaagaagaggaggaagacgaggaagacgaggaa
gacgaggaagaggaagagcggcccaggaagaagcccagacaccacggcttcattttagat
gaggctgaagaggacgatgacgaagaagaggaggaggaagccgagtgggaggtcggcgcg
gaggacatagtggacagagcggggctccccggcccggacagccatgaagccaacccccag
gaggaccgctccggggcgcggcgcctccagaacgcctggagggatcagcgggaggaggag
ctggcccagtatttcatgcagaaatacgccacccccgcgtcccgggaggccgggcgcgga
gccccgcggcagcctccggaccacatcgcccagcagaggctgctccccggagtccgggac
cccaagctgtggatggtcaagtgcaagctggggcaggaaaaggccacggccctgactctc
ctgcgcaagttcttggccttccgcttcagtgacagccccctgcagatccagtccgttgtg
gctcccgagtatctcaagggctatgtctatgtggaggcccacaagctctgccacgtactg
gctgccatccagggcgtggccagcctgcgccggggctgccgggacccgaagccggtgccc
atcggggagatgacggacgtgctgaaggtgctgcggcgccaggcccccagcctgcggccc
gggagctgggtgcgcgtcagggcgggcctctacaagggcgacctcgctcaggtgacccgc
tccgagcccggcaacgccgcggtcttcctcaagatgatccctcgcatccgctacagccgc
ggggccccgacagaaggcttccccaagaggaagcggctccccaggccgccccagaagctc
ttggatacacagaagatccgatccctgggaggaaagctgtccagggacggagacttcctc
ctcttccggggggaccgctacagcaccgagggcttcctcttcaagaccttccccccgtcg
gccctggtcaccgagggcgtcagccccgcgctctccgagctgcagcacttcgagaaacgc
cccgaagccctgcaggagctgcagctgcgcgtggaagacgagggggccgcggagcgccgc
ttcggggccggagacaaggtgggagtgagcgcgggcgacctcatcaacctgcggggccgg
gtggtgggcgtgcaaggcccctacgtcaccgtgatgcccgagcacgagctgctccgggag
ccgctgcagctgcccgccggggagctgcgcaagcacttcgaggtgggggagcacgtccag
gtgctggcgggtcgctaccggggcaccaccggcttcatcctcaaagtcgagcccaacttt
gtcctgctcctgtccgacctcggccgggaggagctcaaggtgctccccggggacctgcgc
ctgtgcccggacacggcagcccctgaggacgtgtggggccggcaccgctggggagagatg
gtgcagctgagccccagcactgtgggcgtagtcgtgggcctggacgctgacgtcctgcgg
gtcctggacatgcaggaccaggtggtcacggtgccccgtcaagccgtcactgccaggaag
gacaaccggctggccatggccctggacagtcagcagaacaatgtccacgtccgggactcg
gtcagggtggtggagggcccgcgctcggggctcgaggctacggtcctctatctcttccgg
ggaatcgccttcctccgctccaggacgctcacggagcacgggggcctgttcgcctgcaag
tgcaaacatctcttggtgcccagcgcggcccagtgcagccagggccgcggtctctctgca
gggggcctgactctgggcccgagcccttaccccaccagtcccagacagcctggcccagca
gggcgggggcgcgggcggtttgagagtaccagtgccagggggccaggcccgaactcacgt
ggctggtggggttggggctccaggggccggggctcctggggccacggctcctggggccac
ggctcctggggccacagcgaccaccacccacacaagggcctcctgggccaatcagtgcgt
atctgccagggggcctacaaggggtacatcgggctggtaaagaatgtgagagaaggcgtg
gcccatgtggagctgcattccacctgtcagaccattttcgtgcacctgcagagactcacc
cccgtgggctcctcgagtcaggcactctggccttccgacttggatactcccaccagctct
agctcccagactcccacctacaactcagacagttatagtccaatccaagcgggtggagct
tgggaccccagtgtaggcaacaccccctcctgcccatag
DBGET
integrated database retrieval system
