Antechinus flavipes (yellow-footed antechinus): 127558400
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Entry
127558400 CDS
T08818
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127558400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127558400
03012 Translation factors [BR:
afz03012
]
127558400
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127558400
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127558400
Translation factors [BR:
afz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127558400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NACHT
AAA_23
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127558400
NCBI-ProteinID:
XP_051847760
LinkDB
All DBs
Position
3:complement(13061540..13105474)
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AA seq
1017 aa
AA seq
DB search
MSYEHRQNWGRDGGGPRGSSNGGYGGNRGGGGSRGGGGGSGGGGGGGGGGGGRGRHPGHL
KGREIGLWYARKQGQKSKDAERQERAVVRMDERREEQIVQLLNSVQTKNDKDSQPQISWF
SPEDHGYGTEIPVQNKPPSEKKFLEKEKKPLDQEKKFVDRGKKLTERGKSFVDRDSEYLL
QENEPDVDLDQLLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGE
TGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAEPCGSGHSTG
YQIRLQSRLPRKQGSILYCTTGIILQWLQSDPQLSSVSHIVLDEIHERNLQSDVLMTVIK
DLLNFRPDLKVILMSATLNAEKFSEYFDHSPMIHIPGFTFPVAEYLLEDVIEKIRYTPEN
TDRKPQFKRGFMQGHVNRPEKEEKEAIYKERWPDYVRQLRGRYSANTIDVLEMMDDDKVD
LNLVAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTV
NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWV
SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI
AYFLSRLMDPPSHDAVLLSINHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGAL
FCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFEGWEEARR
RGFRFEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVSSKNPKDPKSNINSDNEKII
KAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEESEFHYNWLIYHLK
MRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKELRK
ELDALLQEKIENPHPVDWKETQSRDCAVLSAILDLIKTQENGTPRNFSPRFQDGYYS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgccagaactggggccgcgatggtggcgggccccgcggctcgagc
aacggcgggtacggaggaaaccgcggcgggggcggaagccggggcggtggcggaggcagc
ggcggcggaggaggcggcggcggcggcggaggaggccggggccggcatcccggacacctg
aagggccgcgaaataggcctttggtacgcaaggaagcagggccagaagagcaaggacgcc
gagcgccaggagagagctgtagtgcgtatggatgaacgtcgagaagaacaaattgtacag
ctgttgaattctgtccaaactaagaatgataaagattctcagccgcagatatcctggttt
tctcctgaggatcatggatatggcactgaaattcctgtccagaacaaaccaccttcagaa
aagaaatttttggaaaaagaaaagaaacctttggaccaagaaaagaagtttgtagaccga
ggcaagaaattgactgaaaggggaaaatcatttgtagatagagattctgaatatctcttg
caagagaatgagccagatgtggatttagaccagctacttaaggaagatctgaaaagaaag
aagtctgatccccgctatattgaaatgcagcatttccgggagaagctgccctcatatgga
atgcaaaaggaattggtaaatttgataaataacaatcaggttactgtcataagtggtgag
actggttgtgggaaaaccacccaagttacccagttcatcctagatgactatatcgaaaga
ggaaaaggatccgcctgccggatagtgtgtacacagcccagaagaatcagtgcaatttcg
gttgcagagagagtggccgcagagagagccgaaccatgtggcagcggccatagtaccggg
taccagatccgcctccagagccggttgccaaggaaacaaggctccattttgtactgtaca
acaggaatcattcttcagtggctccagtcagatccgcaattatccagtgttagtcacatt
gtacttgatgaaatccatgaaaggaatctgcagtcagatgttttaatgactgttattaaa
gatctcctaaactttcgacctgacctgaaagtaattctgatgagtgcaactttgaatgct
gagaagttttcggaatattttgatcatagtccaatgattcacatacctggtttcacattc
cctgttgctgaatatcttttagaagatgtgattgaaaagataaggtatacaccagaaaat
acagatcgcaaaccccagtttaaaaggggttttatgcaaggtcatgtaaatagaccagaa
aaagaagagaaagaagcaatttataaagaacgctggccagactatgtaaggcagctgcga
ggaaggtattcagcaaataccatagatgttttagaaatgatggatgatgataaagttgat
ctgaatttagttgctgcacttatccgacacattgttttggaagaagaggatggtgcgatc
ttggtattcctcccaggctgggacaacatcagcactttgcatgaccttttgatgtcacag
gtcatgtttaaatcagataggttcattataatacctttgcactcattgatgcctactgtt
aaccagacacaggtatttaaaaggaccccgcctggtgttcggaaaatagtcattgctacg
aatattgcagaaacaagtatcaccatagatgatgtcgttcatgtgattgatggtggaaaa
ataaaagaaacccattttgacacccagaataacatcagtacaatggcagcagagtgggtt
agtaaggcaaatgccaagcagaggaaaggacgtgctgggagagttcaaccaggtcactgc
tatcatctgtataatggtcttcgagccagccttctggacgactatcagttaccagaaatt
ttgagaacaccattagaagaactgtgtttacaaataaagattttaaggttaggcggaatt
gcttatttcctaagcaggttaatggacccaccatctcatgatgccgttttactgtctata
aatcatctaatggaattgaatgctttggataagcaagaagaattgacccctcttggagtc
catttagcacgattgccagttgagccacatattgggaaaatgattctctttggagccctt
ttttgctgcttagacccagtccttaccattgcagctagtcttagcttcaaagatcccttt
gtcattccactgggcaaagaaaaagtggccgatgccaggaggaaggaattgtcaaagaat
acgaaaagtgaccacttgacagttgtgaatgctttcgagggatgggaagaggcgaggaga
cgtggtttccggtttgaaaaggattattgctgggagtattttctctcttcaaacacactg
cagatgctgcacaacatgaagggacagtttgccgagcaccttcttgctgctggatttgtg
agcagcaagaacccaaaagatcccaaatcaaatattaattcggataatgaaaagataatc
aaagcggttatctgcgctggcttatatcccaaagttgctaaaatacggccaagttttagt
aaaaaaaggaaaatggtgaaagtttgcaccaaaactgatggaacagttaacattcatcct
aaatctgtaaatgttgaagagtcagagttccattataactggctgatctaccacctgaag
atgagaacaagcagcatatatttatatgactgcacagaggtatctccctactgtctctta
ttctttggaggtgatatttccattcagaaggataaagatcaagatactattgctgtagat
gaatggattgtcttccagtctccagcaagaatcgcccatcttgttaaggaattaagaaaa
gaacttgacgcccttttgcaagaaaagattgagaaccctcatcccgtggattggaaagag
actcagtcccgagattgtgctgtgctgtctgctatcctagacttgatcaaaactcaggaa
aatgggacacccaggaacttttccccacgattccaggatggatactacagttga
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