Antechinus flavipes (yellow-footed antechinus): 127558629
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Entry
127558629 CDS
T08818
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04140
Autophagy - animal
afz05014
Amyotrophic lateral sclerosis
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127558629
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127558629
05022 Pathways of neurodegeneration - multiple diseases
127558629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127558629
Membrane trafficking [BR:
afz04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127558629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
127558629
NCBI-ProteinID:
XP_051847814
LinkDB
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Position
1:157503804..157575647
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AA seq
459 aa
AA seq
DB search
MLRWLIGGGREPQGLAEKSPVQTINEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVFLWNAQTGEKIFEFHGHTQKITAITAFPSLDSCEDKSQLILTASADRTVIIWDC
DTGRQVQKVSCFHSTVKCLTVLQRLDVWLSGGSDLCVWNRELDLLCKTSHLFDTGISALI
ELPKNCVAAAVGKELIIFRLVSSTEGSVDWDVIEVKRILDHQDNILSLGNINDLSFVTGS
HIGELIVWDALDWTMQAYERSFWDLSLQLDTQQEIKLCQKPNEISIHHFTCDEEYLFAAV
GRGLYVYNLQMKRVIAFQKTAHDSTILHIAKLPNRQLISCSEDGSVRIWELREKQQLTAE
PVPTGFFNMWGFGRVNKPANQIIKKPQENGTVCSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLRLFQKLEDDGDLNLGF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatggttgatcggtggaggccgagagccccagggattggccgagaagtctcca
gtacagacaataaatgaggagcaaacccagaatccctacactgaactgctagtattgaaa
gcacatcatgacattgtacggtttctagtacaattagatgactacagatttgcatctgct
ggagatgatggaattgtgtttttatggaatgctcagactggagaaaagatttttgaattc
catggacatacacaaaaaataacagctataactgcatttccttccttggattcttgtgaa
gataaaagtcaattgatcttaacagcatctgctgataggactgttattatttgggattgt
gatactggcagacaagttcagaaagtgtcatgctttcattccacagtcaagtgtttgaca
gtccttcagagactggatgtttggctctctggtggtagtgatctttgtgtttggaaccga
gaattagatctcctgtgtaagaccagtcacctctttgatacagggatcagcgctttgatt
gagttacctaagaactgtgtcgcagcagcggttggcaaagaactgattatctttaggttg
gtatcttctacagaaggatctgtagactgggatgttattgaagttaaacgcatccttgat
caccaggataatattctctcattaggtaatatcaatgatttgagcttcgtcacaggctcc
cacattggggagctaattgtctgggatgccttggattggacaatgcaggcctatgaacgc
agcttctgggacctttcactacaactggatacacagcaagaaattaagctctgtcaaaaa
ccaaatgaaatttccattcatcatttcacatgtgatgaggagtatttgtttgctgctgtt
ggaaggggcttatacgtgtataaccttcaaatgaagcgtgtgattgccttccagaaaact
gcacatgactccactatcctgcacatcgccaaacttccaaacaggcagttaatctcttgt
tcagaagatggcagtgttcgcatttgggagttacgggaaaaacagcagctgacagctgaa
cctgtgccaacaggatttttcaacatgtggggatttggaagggtgaacaaaccagcaaac
caaatcattaaaaaaccacaagaaaatggtactgtgtgttccttggagcttattggagat
ttgattggacactcatcttctgtagagatgttcttatactttgaagaccatggactagta
acatgctctgctgatcacctcattattttgtggaaaaatggagaacgagagtcaggatta
cgcagtttaagattatttcagaaattagaggatgatggtgatttgaatcttggtttctag
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