Antechinus flavipes (yellow-footed antechinus): 127558837
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Entry
127558837 CDS
T08818
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127558837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127558837
Spliceosome [BR:
afz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127558837
Complex C
U5 SnRNP specific factors
127558837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
127558837
NCBI-ProteinID:
XP_051848138
LinkDB
All DBs
Position
4:26812383..26827600
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGTPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLRTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggggtgtttccctacagagggccgggtacccctgtgcccggccctctggcaccg
ctgccggactacatgtccgaggagaagcttcaggaaaaagcccgaaaatggcagcagttg
caggcaaagcgctatgcagagaagcggaaatttggatttgtagatgcacaaaaggaagac
atgcctcccgagcatgtcaggaagatcatccgtgaccatggggacatgacgaaccggaag
ttccgtcatgacaagcgagtctacctgggggccctgaagtatatgccgcatgctgtcctc
aagctcttggaaaacatgcccatgccctgggagcagatccgggatgtgcctgttctgtac
cacatcactggtgcgatttcctttgtcaatgaaattccttgggtcatcgagcctgtctac
atctctcagtgggggtccatgtggatcatgatgcgtcgagagaagagggacaggcggcac
ttcaagcggatgcgtttccccccatttgatgatgaggagccaccccttgactatgctgac
aatatcctcgatgtggagcctttggaagccattcagctggaactggaccctgaggaggat
gcccctgtgctggactggttttatgaccaccagcccctaagggacagtaggaagtatgta
aatggctctacttatcagcgctggcagttcaccctgcccatgatgtccactctgtaccgc
ctggccaatcagctcctaactgatcttgtggatgacaattacttctatctgtttgaccta
aaggcgtttttcacctctaaggccctcaacatggctatcccagggggccctaaatttgaa
ccactggtccgagatatcaatcttcaagatgaagactggaatgaatttaatgatatcaac
aagatcatcatcaggcagcccatcagaaccgaatataagattgcttttccatacttgtac
aacaaccttccacaccacgtgcacctcacctggtaccacactcctaatgttgtgttcatc
aaaacagaggaccctgatctcccagccttttactttgatcctttgatcaatcctatctcc
cacagacattctgtcaagagtcaagaacctttgccagatgatgacgaggagtttgagctg
cctgagtttgtggaacctttcctcaaggacacgcccctttacacagataatactgccaat
ggcatcgcacttctgtgggcacctaggcccttcaaccttcgctctggtcgcacccgccgt
gccctggacatacccctggttaaaaactggtatcgggagcattgtcctgctgggcagcct
gtgaaggtgagggtctcctaccaaaagctactcaagtactacgtgctgaatgccctcaag
caccgaccccccaaggcccagaagaagaggtatctcttccgatcctttaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtagggctgcaggtctgccgccagggc
tataatatgctcaacctcctcatccaccggaagaatctcaactacttgcatctggactat
aacttcaacctaaagcctgtcaagactctcaccaccaaggagagaaagaagtctcgcttc
ggaaatgccttccacttgtgtcgggaggtgctgcggctgaccaagctcgtggtggacagc
cacgtccagtaccgcctgggcaacgtggatgcctttcagctagcagacgggctgcagtat
atatttgcccacgtgggacaactgacaggaatgtaccgctacaaatacaagctgatgcgg
cagatccgcatgtgcaaggacctgaagcaccttatctactatcgcttcaacacgggtcct
gtggggaagggcccaggctgtggtttctgggctgctggttggcgagtctggttgtttttc
atgcgtggcatcacccctcttttggaacggtggctgggcaacctcctggcccggcagttt
gaaggtcgtcactcaaagggagtggcgaagaccgtgaccaagcagcgagtggagtcccac
tttgacttggagctccgggcagcggtgatgcacgacatcttggacatgatgcccgagggc
atcaaacagaacaaggcccggacgatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacatcccctggaaggttcctgggttgccgacccccattgagaacatgattctg
cgctacgtgaaggcgaaggcggattggtggaccaacactgcccattacaaccgagagcgg
atccgccggggagccaccgtcgacaagaccgtttgtaagaagaacttgggtcggctcaca
cggctctatctgaaggccgaacaggagcgacagcacaactacctaaaggatggtccctac
atcacagccgaagaggcagtggctgtctacaccaccaccgtgcactggctggagagccgc
agattctcccccatccctttccccccactctcctacaagcatgacaccaagctactcatc
ctggccctggagcggctcaaggaggcctacagcgtgaagtcccgtttgaaccaatcccag
agggaggagctgggcctgatcgagcaagcctatgacaacccgcacgaggctctgtctcgc
atcaagcgtcacttacttacgcagagagccttcaaggaggtgggcattgagttcatggac
ctgtacagtcacctggttcccgtgtacgacgtagagcccctcgagaagatcacagacgcc
tacttggaccagtacctgtggtacgaagctgacaagcgccggctcttcccaccctggatc
aaacctgctgacacggagccgcctcccctgctggtgtataagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacgagtgagggagagtgcaacgtcatgctggagtcacgc
tttgagaagatgtacgagaagatcgacttgacgctcctgaacaggctcctgcgcctcatt
gtggaccacaacattgctgactacatgacagccaagaacaacgtggtcatcaactacaag
gacatgaaccatacgaattcatatgggatcattcgaggactccagttcgcctccttcatc
gtgcagtactacgggctggtgatggaccttctggtgttgggcctgcaccgggccagcgag
atggctgggcctccccaaatgcccaatgacttccttagcttccaagacatcgccacagaa
gccgcccaccccatccgcctcttctgtagatacatcgaccgcatccacattttcttcagg
ttcactgctgacgaggcccgggacttgatccagcgctacctcacggagcacccagacccc
aacaacgagaacatcgtgggctacaacaacaagaagtgctggccccgcgacgcgcggatg
cgcctcatgaagcacgatgtcaacttgggccgcgctgtgttctgggatatcaaaaaccga
ctgccgcgatcggtgacgacggtgcagtgggagaacagctttgtgtcggtgtacagcaag
gacaaccccaacctgctcttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggtgtttggaacctccagaacgaggtc
acaaaggagcggacagctcagtgcttcctgcgtgtggatgacgagtcgatgcagcgcttc
cacaaccgtgtgcgtcagatcctgatggcctctggctcgaccaccttcaccaagattgtg
aacaagtggaacacagctctcattgggctcatgacgtacttccgcgaggctgtggtgaac
acccaggagctgctggaccttctggtgaaatgtgagaacaagatccagacccgaatcaag
atcgggctcaactccaagatgccgagccgcttccccccagtcgtgttctacacccccaaa
gagctcggggggctgggcatgctgtccatgggccacgtgctcatcccccagtctgatctc
aggtggtccaagcagacagatgtgggcatcacccacttccgctccgggatgagccatgaa
gaagaccagctcattcctaacttgtaccgctacatccagccttgggagagcgagttcatc
gactctcaacgggtctgggccgagtatgcgcttaagaggcaggaggccatcgctcagaac
aggcggctgaccctggaggacctggaggattcatgggaccgaggcattccccggatcaac
accctgttccaaaaggaccggcacacactggcttatgacaagggctggcgtgtccgcacc
gacttcaagcaataccaggtcctgaaacagaatcctttctggtggacccaccagcggcat
gatggaaagctctggaacctgaacaattaccgcacagacatgatccaagccctgggtggt
gtggagggcatcctggaacacaccctcttcaagggcacttacttccctacctgggagggt
cttttctgggagaaggccagtggctttgaggagtcaatgaaatggaagaagctgaccaat
gcccagcggtccggcttgaaccagatccccaaccgtcgcttcacgctgtggtggtcgccg
accattaaccgcgccaacgtgtatgtaggtttccaggtccagctggaccttactggcatc
ttcatgcacggcaagatccccaccctgaagatctctctcatccagattttccgtgcccat
ttatggcagaaaatccacgagagtattgtcatggacttgtgtcaggtgtttgaccaagaa
ttggatgcgctggaaattgagacggtgcagaaggagacaattcacccccggaagtcctat
aagatgaactcttcttgtgcagacattctgctttttgcctcctacaaatggaatgtctcc
cggccatctctgctggctgactccaaggacgtgatggacagcaccaccactcagaagtac
tggatcgacatccagctgcgctggggcgactatgactcccatgatatcgagcgctacgct
cgggccaagtttctggactacaccaccgacaacatgagtatctacccctctccgacgggg
gtgcttattgccatagacctggcgtacaatctgcacagcgcctacggaaactggtttcca
ggcagcaagccgctgatccagcaagccatggccaagatcatgaaggcaaaccctgcctta
tacgtgctccgagagcgaatacgcaaggggctgcagctgtactcctccgagcccacggag
ccttacctctcttcccagaactacggcgagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtctacagagtcaccattcataagacctttgaagggaacttgactacc
aagcccatcaatggggccatcttcatcttcaatccaaggacagggcagctcttcctgaag
atcatccacacatctgtgtgggctggacagaagcgtctgggtcagttggccaagtggaag
acggctgaggaagtggctgccctgatccgttctctccctgtagaggagcagcccaaacag
attattgtgaccagaaaaggcatgttggaccccttggaggtgcacttactggacttcccc
aacattgtgatcaaaggctcagagctgcagctgcctttccaggcctgtctcaaagtggag
aaatttggggaccttatcctcaaggccaccgagccccaaatggttctcttcaatctctat
gacgactggctcagaaccatctcatcctacacggccttttcccgtctcatcctgattctc
cgtgcccttcacgtgaacaatgaccgggccaaggtgatcttgaagccggacaagaccacc
atcacagagccacaccacatttggcccacgctgactgacgaggagtggatcaaggttgag
gtgcagctcaaggacctgatcctggctgattacggcaaaaagaacaatgtcaacgtggcc
tcgctgacgcagtcagagatccgggacatcatcctgggcatggaaatctccgctccttcg
cagcagcggcagcagattgctgagattgagaagcagaccaaggagcagtcccagctgaca
gcaacacagacccggactgtcaacaagcacggtgatgagatcatcacttccaccaccagc
aattacgagacgcaaactttctcctccaagactgagtggagggtcagggccatctctgcg
gccaacctgcatctgcggactaaccacatctacgtgtcatccgacgacatcaaagagacg
ggctacacctacatccttcccaagaacgtcctcaagaaattcatctgcatttctgatctt
cgggcccagattgcaggctacctctatggagtgagccccccagacaatcctcaggtgaag
gagatccgctgcatcgtgatggtgcctcagtggggcacccaccagacagtgcacctgccg
ggccagcttccccagcatgagtacctcaaggagatggagcccctcggctggatccacact
cagcccaacgagtccccccagctctcgccccaggacgtcaccacccatgccaaggtcatg
gccgacaacccctcatgggacggggagaagacaatcatcatcacctgcagctttaccccg
ggctcttgcaccctgacggcctacaagctgacacccagtggttacgagtggggtcggcag
aacacggacaagggcaacaaccccaaaggctacttgccctcccactatgagcgtgtccag
atgctgctctccgaccgcttcctcggcttcttcatggtccccgctcaggcgtcctggaac
tacaacttcatgggtgttcggcatgaccccaacatgaaatacgagctgcagctggccaac
cccaaagagttctaccacgaggtgcaccggccctcccacttcctgaacttcgcgctgctg
caggagggggaggtgtactcggccgaccgggaggacctgtacgcctag
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integrated database retrieval system
