Antechinus flavipes (yellow-footed antechinus): 127558839
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Entry
127558839 CDS
T08818
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127558839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127558839
Membrane trafficking [BR:
afz04131
]
Endocytosis
Phagocytosis
Scavenger receptors
127558839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
127558839
NCBI-ProteinID:
XP_051848143
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All DBs
Position
4:26834462..26845188
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AA seq
817 aa
AA seq
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MGPWPLLLLWVRGVLGELELDPLGRHVCQDGSSAGSVCCPGWRQEGRECTAPICEGPDAC
GEEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGPDCRESCPCHPHGQCDAATGRCTCNSD
RWGTDCQFLCPCGPHGHCNPLTGACRCEPGWWTATCRKACQCSSSSLGCDQGTGACRCEP
GWWGRRCSFRCSCHHSPCEQSTGRCVCRTGWWGPECQQRCTCRHGHCNPASGHCGCHAGY
QGPFCEQPCPPGRYGVQCQSSCGHCRHNQPCSPDTGACLACEPGWNGTHCDQPCPPGTHG
EKCGQLCPQCRQGEACQPESGHCQHCDPGLTGPRCEEPCAPGTFGEACGSLCPPCVEGTC
DAVTGDCICRLGYWGPSCNASCPVGFYGVNCSSPCPCPEGPCHPASGTCELGFQGQGALL
AGILVPLLLLLLAVVACVSCCCWAAQPDPKDRPARDGAAVSRVKLQVRGALSSLGSALPC
GSLSNHKLPRVTVSHHDAEIPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEGPAYCVPPP
QDEELREAREAGKALSAPEEPSTPFAIPRTSSLARAKRPSVSFAEGTKFGPQNSQDSGEL
ASPSRKPKRLSRPAQAQAEGQEAEGPPGAPEPEDPQSGSQEPPGAAAAQGDVSADHRKLP
LGGRTVAQRVEAIESGNRGSPGPVTTIYMLAGTPKGAEGPVRAVLRRFGSFQKGRAEAKT
KGGIPKPPRRALGRDKGTLVPSPGPSPDSARCPEPCETPAPGEGSQETTGGLGDDGAKGG
TAEAAAGDALSELEEAEKEVEEPQYENVKPGSGTSNS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggggccgtggccgctgctactgctctgggttcggggggtcttgggggagctggagctg
gatcctctggggaggcacgtctgccaagatggaagctctgctggatctgtgtgctgccca
ggctggaggcaggagggccgcgagtgcacagcccccatctgtgaggggcccgatgcctgc
ggggaagaggaggtgtgtgtgaaacccggactctgccgctgcaagcctggcttcttcggg
gcccagtgcagctcccgctgccccggccagtactggggccccgactgccgggagagctgc
ccctgccacccccacgggcagtgcgacgccgccaccggccggtgcacctgcaacagcgac
cgctggggcaccgactgccagttcctgtgtccgtgcggcccccacgggcactgcaacccc
ctgacgggggcctgccgctgcgagcccggctggtggaccgccacgtgccgcaaggcctgc
cagtgcagctcctcctccctgggctgcgaccagggcaccggggcctgccgctgcgagccg
ggctggtggggccggcgctgcagcttccgctgctcctgccatcactccccctgcgagcag
agcacgggccgctgcgtctgccgcacgggctggtggggccccgagtgccagcagcgctgc
acctgccgccacggccactgcaaccccgccagcgggcactgcggctgccacgccggctac
cagggccccttctgcgagcagccctgccccccgggccgctacggggtccagtgccagagc
agctgtggccactgcagacacaaccagccctgctctcctgatacgggggcctgtctggcc
tgcgagcccggctggaacggaactcactgcgatcagccgtgcccaccgggcacccacggg
gagaagtgtgggcagctctgcccccagtgtcggcaaggtgaggcttgccagccagagagt
gggcactgccaacactgtgacccaggcctgacagggcccaggtgtgaagagccctgcgct
cccggcacctttggggaggcctgtgggtcactgtgccctccctgtgtcgagggcacctgc
gatgctgtgactggagattgtatctgcaggttgggctactgggggcccagctgcaatgcc
tcctgccccgtcggcttctacggagtcaactgttcttccccctgcccgtgcccagagggg
ccctgccaccccgcctctgggacctgtgaactcgggttccagggccagggcgccctcctg
gccggcatcctggtcccgctgctgctgctgctgctggctgtcgtggcctgcgtctcctgc
tgctgctgggcggctcagcccgaccccaaggacaggccggccagggacggggctgctgtg
tcccgagtcaagctgcaggtcaggggggccctgagcagcctgggctcggcgctgccctgt
ggctctctcagcaatcacaagctgccccgggtcacagtgtcccaccacgacgccgagatc
cccttcaatcacagcttcattgagcccccgtctgctggctgggcctccgatgactccttc
tcctccgaccccgactctggggaagaggatgaggggccggcttactgcgtgcccccccca
caagacgaggaactgcgagaggcccgtgaggcaggaaaagctctctctgcaccagaggag
ccttccacgccttttgccatcccacgaacttccagcctggcccgagccaagcggccctcc
gtctcctttgctgaaggaaccaagttcgggccccagaactcccaggactccggggagctg
gccagcccctcgaggaagcccaagcggctatcccggccagcccaggcccaagctgagggg
caggaggctgaggggcctccgggtgctccggagccagaggaccctcagtctggttcccaa
gagcctcccggcgctgctgctgcccagggggatgtgtccgctgaccaccgcaagcttcct
ctcgggggcaggactgtggcccagagggtagaggccatcgagagcggtaacagggggagc
ccgggccctgtgaccaccatctacatgttagcagggactcccaagggagccgaggggccc
gtgcgggcggtcctgcgacgctttggcagcttccagaagggccgggcggaggccaagacc
aagggcggcattcccaagcctcctcgccgggccctgggccgggataagggcaccctggtc
ccctctcccggccccagccccgactcagctcggtgcccggagccctgtgaaacgccagca
cccggcgaaggcagccaggagaccaccggcgggctcggggacgatggcgccaaggggggc
accgcggaagcagctgcaggggacgcgctttctgagctggaggaggctgaaaaggaggtc
gaggagccccagtatgagaacgtcaaacctggctctggcacctcgaattcctga
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