Antechinus flavipes (yellow-footed antechinus): 127558917
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Entry
127558917 CDS
T08818
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127558917
03036 Chromosome and associated proteins [BR:
afz03036
]
127558917
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127558917
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127558917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
127558917
NCBI-ProteinID:
XP_051848261
LinkDB
All DBs
Position
4:complement(30261503..30292628)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEDEASDSGDSEDDVGHKKRKRTAFDDRLEDDDFDLIEENLGVKVKRQKFRRV
RKMSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAAPEEEEEEDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKAAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQPVSSFNRKGPSTIQKIKE
ALGFIRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRTREDGDEEEGEGEEVEDEQKGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKTCLAEE
EGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEYVIKACSRKLYNWLKVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMMIEDVKRIVHELDQGQQLSSIGVEMVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSTDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDAKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQANTTPQSTQAQAQPQPSSSSRHRQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagtgaggcagaggaatctgaggaagagtacaatgatgaggga
gaggtggtacctcgggtcaccaagaaattcgttgaagaagaagaagatgatgaagaagag
gaggaggagaacctggatgaccaggatgaacaagggaacttgaaaggcttcatcaatgat
gatgacgatgaagaggaagaagaggaagatgaggccagtgattctggagactctgaggat
gatgtgggacacaaaaagcggaagcgcacagcttttgatgaccgcttggaagacgatgac
tttgacctcattgaagaaaacttgggtgtcaaagtcaaacggcaaaagttcaggcgtgtc
cgaaagatgtccgatgatgaggatgatgaagaggaagaatatgggaaagaggagcatgag
aaagaggccattgctgaggaaatctttcaagatggtgaaggagaagaaggacaggaagct
gtggaggcccccatggctgcaccagaggaggaggaggaagaggatgaagaatcagatatt
gatgacttcatagtggatgatgatggacagcctcttaagaaacccaaatggaggaaaaaa
cttccaggctatacagatgcggccctgcaagaggcccaggaaatctttggagtagacttt
gactatgatgagtttgagaagtacaatgagtatgatgaggagctggaagaggaatatgaa
tatgaagacgatgaggcagaaggtgaaatccgggtgcgacccaaaaagaccaccaaaaag
cgagttagtcggcgaagcatttttgagatgtatgaacccagtgagctggagagcagccac
ctgacagaccaggataatgagatccgagctacagatctgcctgagaggttccagttgcgc
tctatccctgtcaaggcagctgaagatgatgagctggaagaagaagccgattggatctat
cgaaatgcctttgcaacaccaaccatttcactccaggaaagctcagattacctggaccgt
gggcagccggtcagtagtttcaatcgaaaaggccccagcactatccagaagatcaaagag
gccctgggcttcattcgcaatcagcattttgaggtacctttcattgccttctacagaaag
gaatatgtagaacctgagctgcacatcaatgacctgtggagggtgtggcagtgggatgaa
aagtggacacagttaaagatacggaaagagaatctgacgcggctttttgagaaaatgcaa
gcctatcagtatgagcagatatctgccgacccagacaagcccctggctgacggcatcagg
gcattggacaccacagatatggagagattgaaagatgtacagtcaatggatgagctgaag
gatgtctacaatcacttcttactatactatgggcgcgacatcccaaagatgcagaacgct
gccaaggccagccggaagaagttaaagcgcacccgggaggatggagatgaagaagaaggt
gaaggggaagaagtggaggatgagcagaagggcccagagctgaagcaggcttcccgccga
gacatgtacaccatctgccaaagcgccggcctagatggcttggccaagaaatttgggctt
accccagaacagtttggggagaacctccgggacagttaccagcggcatgagacagagcag
ttccctgctgagcccctggaactggcaaaggactacgtgtgcagtcagttccctacccca
gaggcagtactagagggtgctcgctatatggtggctctgcagattgcccgggagcccctt
gtccggcaggtgcttcgacagaccttccaggagagggctaaagttaacatcaccccaact
aagaagggcaagaaggatgttgatgaggcccattacgcctactctttcaagtatctgaag
aataagcctgtgaaagaacttcgagacgaccagtttctcaagacctgcttggctgaagag
gagggattgctcaccattgatatcagcatcgacatgaagggagttgagggctatggcagt
gaccaaacatactttgaggagatcaagcagttctactatcgggacgagtttagccaccag
gtgcaagagtggaaccggcagcggaccatggccatcgagcgagccctgcagcagtttctt
tatgtgcagatggccaaagagctcaagaataagctgctggccgaagccaaagagtatgtc
attaaggcttgtagccggaagctgtacaattggctgaaggtggccccctaccgacctgac
caacaggtagaggaagatgatgattttatggatgagaaccaagggaaaggcatccgggtg
ctagggattgccttctcctctgccagagaccaccccgtgttttgtgccttggtcaatgga
gagggagaagtaacagatttcctacggctgcctcactttaccaaacggaggactgcgtgg
agggaagaagagcgggaaaaaaaagctcaggacattgaaacgctaaagaaattccttctg
aacaagaaaccacacgtggtaactatagcaggcgagaacagagatgctcagatgatgatt
gaagatgtgaagcgaattgtgcatgagcttgaccaaggccagcaactgtcatctattgga
gtggagatggtagacaatgaactggccatcctgtatatgaacagtaaaaagtctgaggcg
gaattcagagattaccccccagttctgagacaagcagtgtctctggcccgacgcatccaa
gaccccttgattgaatttgcacaggtgtgcagcacagatgaggatattctttgtcttaag
ttccaccctttacaggaacatgtggtgaaagaggagctgctcaatgccttatattgcgag
ttcatcaatcgagtcaatgaggttggtgttgatgtcaaccgagcaattgcccatccctac
agccaggccctgattcagtatgtgtgtggcttggggccacgcaaagggacccatcttcta
aagattctgaaacagaacaatactcgcctggagagccggacccagctagtcaccatgtgc
cacatggggcccaaggtcttcatgaactgtgcaggttttctgaagatagatacagcctcc
ttgggtgacagcaccgattcatatattgaggttttggatggttcccgagtccatcctgag
acctatgaatgggccagaaagatggcagtggatgctctggagtatgatgagtctgctgaa
gatgccaaccctgccggagctttagaagaaatcttggagaacccagaacgactcaaggac
ctggaccttgatgcctttgctgaagagctcgagaggcagggctatggtgataaacatatc
actctctacgacatccgtgctgagctgagttgcaggtataaggatctccggacagcttac
cgctctcccaataccgaggaagtctttaacatgctgactaaggaaacaccggaaaccttc
tacattggaaaactgatcatctgcaacgtaacgggaattgcccacagacgtccacaaggc
gagagctatgaccaggcaatccgcaatgatgagacagggctatggcaatgtcccttctgc
cagcaggacaatttccctgagctgagtgaggtttggaaccactttgatagcggttcatgc
ccaggccaggccattggtgtcaagacccgactggacaatggggtcaccggctttatccct
acaaagtttctcagtgacaaggtagtgaagcgacctgaggagcgggtgaaggtggggatg
accgttcactgccgcatcatgaaaatcgacatcgagaaattcagtgcggacctgacctgc
cgcacctctgatctcatggacaagaacaacgaatggaagctgcccaaagacacatactat
gactttgacgccgaagcagctgaccacaagcaggaagaggacgccaagaggaagcagcag
aggaccacatacattaagcgagtgattgcacatccatcgtttcataatattaactttaag
caagcagaaaagatgatggagaccatggaccagggtgatgtgattattcggccaagcagt
aaaggggagaaccacctcacggtgacctggaaggtcagcgatggcatttatcagcacgtg
gatgtccgggaagagggcaaagaaaatgcctttagcttgggtgccaccctatggatcaac
agtgaggagtttgaggacctggatgaaattgttgcccgctatgtccagcccatggcatcc
tttgctcgagatcttcttaaccacaagtattaccaggaatgtggtggcggggatcgcaag
aaactagaggagctgctcatcaaaaccaagaaggagaagcccaccttcattccttacttc
atctgtgcctgtaaagagctgcctggcaagttcctgctgggctaccaaccccggggcaag
cccaggatagaatatgtgagtgtgactccagaaggtttccggtaccgaggccaggtcttc
ccaactgtgaatggcctcttccgctggtttaaggatcattaccaagaccctgtgccaggc
atcacgcccagcagcagcagcaggacgagaacgccggcctccatcaacgccacccctgcc
aacatcaacctcgcagatctgaccagagcagtgaatgccctgccccagaacatgacctcg
cagatgttcagtgccatcgctgctgtgactggccaaggacagaaccccaacgccacccct
gcccagtgggcctccagccagtatggctatggcggcagcggaggtggcagcagtgcttac
catgtgttcccgaccccggcccagcagcccgtggccacgccgctgatgacgcccagctat
tcgtacacaacccccagccagcccatcaccacgccccagtaccaccagctacaagccaac
accaccccacagtccacccaggcccaggcccagccccagccgtcctcgagctcgcggcac
cggcagcagccaaagtccaacagccatgctgccatcgactggggcaagatggcagagcag
tggctgcaggagaaggaggcagagcgtcggaaacagaagcagcggctcacgcctcggccc
tcccccagccccatgatcgagagcacccccatgtccatcgcgggcgacgccacgccgctg
ctggatgagatggaccgctag
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integrated database retrieval system
