Antechinus flavipes (yellow-footed antechinus): 127559071
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Entry
127559071 CDS
T08818
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127559071
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127559071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
zf-C2H2_4
HTH_28
HTH_23
zf-Di19
CPSase_L_D3
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
127559071
NCBI-ProteinID:
XP_051848606
LinkDB
All DBs
Position
4:39131121..39191934
Genome browser
AA seq
1433 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTATVSVSLQPVSAPVPIVAHAS
VGGHLSTSTTVSSSGVQNSDSAKKTLVTLIANNNGPTLYHNTSLRDLHVKPPLLPPSNPV
IRNHWYSYPTAGNPLVQQGGQPLILTQNPASGLSTMVTQPVLRPVQVMQNANHVTNSPVT
SQPIFITTQGFPVRNVRPVQNTMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQ
VFSQMTQVRPGSTMPVRPTTNTFTTVIPATLTIRSTVPQSQSQQTKSTPSTSTTPTATQP
TSLGQLAVQPPSQSSQAPNPKLVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQS
PGPVVVSNNSPAHSSQRSSGPESSAMKVTSPIPTFDLQDGGRKVCPRCNSQFRVTEALRG
HMCYCCPDLVDFLKKGKPLDSEPSITSATKPPSPEKTAPMPSTPSTPAPTLSPPAKAPEP
MENSGDVTQSKLIMLVDDFYYGRDSGKVSQLLNFPKVPTSFRCPHCTKRLKNNIRFMNHM
KHHVELDQQNGEVDVHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEP
LFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDGHFRMIHEDTRHLLCPYCLKVFKNGNA
FQQHFMRHQKKSVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRAS
RGQPRILPVSSNDAPPNALQDAAPLSTPADPLPIFLYPPVQRSIQKKAVKKMSVMGRQTC
LECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNSTVSG
IKLACTSCVFVTSVGDAMAKHLVFNPSHQSSNILPRGLTWISHSRHGQAHDRGIKNTYPS
AFPHNKISTVKPVGTPPECGEPPVSQAQLLSASSPLLPPGASGCPQTPASLLHGEGAECL
SLDEQDEGALALSDPEPTAAGGLSGAGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQR
RIRRWLRRFQASQGENLEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSL
EGGFKISYEWAVRFMLRHHLTPHARRAVAHTLPKEVAENAGLFIEFVQRQIHTQDLPLSM
IVAIDEISLFLDAEVLSSDDRKENALQTVGTGEPWCDVVLSILADGTVLPTLVFYRGQME
QPTNVPESILLEAKESGYSDDEIMELWSSRVWQKHTACQRSKGMLVMDCHRTHLSEEVLS
MLSSYSTLPAVVPAGCSSKIQPLDVCIKRTVKNFIHKKWKEQAREMADGTCDSDILLQLV
LCWLAEVLEVIADCPELVQQSFLVASVLPGPDGTANSPTRNADMQEELITSLEEQLKLSG
EQTEEEPAASTPQSRPSPEEVIEPESLHQLFEGESETESFYGFEEADLDLMEV
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcagataccgacctgtttatggaatgtgaggaagaggagctggagccatggcagaaa
atcagtgatgtgattgaggattctgtggttgaagattataattcagtggataaaacagct
acagtttctgtgagcctgcagccagtctcagctccagtgcccatcgttgcccatgcttct
gttggtgggcacctctctacatccaccaccgttagtagcagcggagtacagaacagcgac
agtgccaagaagacgcttgtcacactaattgccaataacaatggtccaacactataccac
aatacctccctcagagatctccacgtgaagccaccattgctgcctcccagcaatcctgta
atcagaaaccactggtactcctaccccacagcaggcaatcctttggttcagcaaggtgga
caaccactcatcctgacacagaatccagcctcaggtctgagcaccatggtcactcaacca
gtattgaggcctgtccaggtcatgcagaatgccaaccacgttactaattcccctgtgacc
tcgcaacccatattcatcactacacagggatttcctgtaaggaatgttcggcctgtacaa
aatacaatgaatcaggttggaatagtgttgaatgtacagcaaggccaaacagttagacca
attacactagtcccagctccaggtacccagtttgttaaacccacagttggcgtccctcag
gtgttctctcagatgacacaggtgaggcccggctccacgatgcctgtgaggcccaccacc
aacacctttaccacggtcatcccagccaccctcaccatccgcagcaccgtcccgcagtcc
cagtctcagcagaccaagtccactcccagcacctcaaccactcccactgccacgcagccg
acctcgctggggcagttggctgtacagccaccgagccagtccagccaggccccgaatccc
aagctagtgagcattgccagctttgtcactgtcaagcgacctggggtgacaggtgagaat
agcaatgaggtggccaagctggtgaataccctcaacaccatcccttccctgggccagagc
cctgggccagtggtggtgtccaacaacagccctgcccacagctctcagagaagcagcgga
cctgagtcatcagcaatgaaagtgacttctccaataccaacatttgacctccaggatggt
ggccggaaagtctgcccacgctgtaattcccagttccgtgtcactgaagctctgagaggc
cacatgtgttactgctgcccagacttggttgatttcctgaagaaaggaaaacctcttgat
tcagagcccagtatcacgtcagcaacaaagccaccatccccagagaagaccgctcccatg
ccctccacaccatctacacctgctcctaccctgtcgccacctgccaaggcccctgaaccc
atggagaattcaggtgatgtcactcagagcaagctcatcatgttagtggatgacttctat
tatggacgggacagcggcaaagtgagccagctcctcaattttcctaaggtgcccacgtcc
tttcgatgcccacactgcacgaaaaggcttaaaaacaatatccggttcatgaaccacatg
aagcaccatgtggagctggaccagcagaacggggaggtggatgtccacaccatctgccag
cactgctaccgccagttctccactcctttccagcttcagtgccacctggaaaatgttcac
agtccctacgagtctaccactaagtgcaagatttgtgagtgggcctttgagagtgagccc
ttgttcctccagcacatgaaggacacccacaaacccggggagatgccttacgtttgccag
gtgtgtcagtaccgctcttccctgtactcagaggtagatggtcattttcgcatgatccat
gaggatacccggcatctgctctgcccctactgtctgaaggtcttcaaaaatggcaatgca
ttccagcaacatttcatgaggcaccagaagaagagtgtctatcactgtaataaatgccgg
ctgcagtttctgtttgccaaggacaaaatagagcacaaacttcagcatcacaaaaccttc
cgcaagcccaaacagctggaaggcctgaaaccaggcaccaaggtgaccatccgggcatcc
cgaggacagccacgaatactgcctgtctcctcaaatgatgcaccacctaatgccttgcaa
gatgctgcccccctgtctaccccagcagaccctcttcccatcttcctttatccccctgtc
cagcgaagcatccagaagaaagctgtcaagaaaatgagtgtcatgggccggcaaacgtgc
ctggagtgcagctttgagatccctgatttccccaatcatttccctacctatgtccactgc
tccctgtgtcgctatagcacctgctgctccagagcatatgccaaccacatgatcaacaat
catgttccacggaagagccccaagtacttggccttgtttaagaactccactgtcagtggg
atcaaactggcctgtacttcctgcgtttttgttacttctgtgggagatgccatggctaaa
catctggtcttcaatccatcacatcaatccagcaatatcctaccacgaggactgacttgg
atatcccactctaggcatggccaggcccatgatcggggtataaaaaacacctacccttct
gctttcccccacaacaaaatttccactgtgaaacccgtgggcaccccccctgagtgtggg
gaaccacctgtatcccaggcccagctgctttcagcatcatctccacttctccctccggga
gcctctggctgtccccagactccagcatcccttctgcatggagagggggctgagtgcctg
agtcttgatgagcaagatgaaggagccctagctctgtcggaccccgagccaacagcagcc
gggggcctcagcggagccggcaagaaggaacagctgtcggtcaagaagctgcgagtggta
ctgtttgccttatgctgcaatactgagcaggcagccgagcatttccgcaacccacagcgg
cgtatccggcgttggctgcggcgctttcaggcctcccaaggagagaatctggagggcaag
tatctgagtttagaagccgaggagaagttggccgaatgggtcctgacacagcgggaacag
cagcttcctgtcaatgaggaaacactcttccagaaggccaccaaaatcgggcggtcgctg
gagggcggcttcaagatctcctatgagtgggcagtgaggttcatgcttcggcaccacctg
acccctcatgcccggagggccgtggctcacaccctacccaaggaagtggcagaaaatgct
ggactcttcattgagtttgtgcagcggcaaatccatacccaggacctgcctctttctatg
atcgtggccatcgatgagatctccctcttcctggacgccgaagtgctgagcagcgatgat
cggaaggaaaacgccctgcagacagtgggcaccggggagccttggtgcgacgtcgtgctg
tccatcctggcggacggcaccgtccttcccaccctggtcttctacagggggcagatggag
cagcccaccaacgtgccagagtctatcctgctggaggccaaagagagtggctacagcgat
gatgagatcatggagctgtggtcctcgagggtgtggcagaagcacacggcctgccagcgc
agcaagggcatgttggtgatggactgccatcgcacccacctgtccgaggaggtgctgtcc
atgctcagctcctacagcaccctcccggccgtggtgcccgcgggttgtagctccaagatc
cagcctttggacgtgtgcatcaaaaggactgtcaagaacttcatacacaagaagtggaaa
gagcaggcccgagagatggcagatggcacgtgtgactctgacatcctccttcagctggtg
ctttgttggctggcagaggtgctggaggtcatcgcagactgcccagagttagtccagcag
tccttcttggtggccagtgtcctgcctggccccgatggcactgctaactcacctacccgc
aacgctgacatgcaggaggagctgattacctccctggaggagcagctgaaactgagcggg
gagcagactgaggaggagcctgcagcctccacaccccaatccagaccatcccctgaagag
gtaattgaacctgagagccttcaccagctctttgaaggtgaaagtgagacagagtctttc
tatggctttgaagaggctgatctggatttgatggaagtctga
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