Antechinus flavipes (yellow-footed antechinus): 127559526
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Entry
127559526 CDS
T08818
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127559526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127559526
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127559526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
AAA_14
TIP49
AAA_28
NPHP3_N
AAA_33
RNA_helicase
Mg_chelatase
Vps4_C
AAA_18
NACHT
nSTAND3
ABC_tran
AAA_3
AAA_17
Rad17
Viral_helicase1
TsaE
IstB_IS21
nSTAND_NTPase5
Zeta_toxin
ATPase
Parvo_NS1
DUF4194
Motif
Other DBs
NCBI-GeneID:
127559526
NCBI-ProteinID:
XP_051849338
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All DBs
Position
4:complement(78446972..78531990)
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AA seq
905 aa
AA seq
DB search
MKKSAIGGCERSFVTAGQVNQAFSRAVPAARSPTSCWRPGCLSLEISSDMKPRVVTYVDR
KLKRRIVQYLSSSECGKYVDIGTLASDLQEMYSVDYGRRKRNAFRIQVEKVFSIIKREKE
LEDLTELEDEHLSKRARQSQEFNECVANKTDDDSDVDNFPEQPSANHMNNSLLSLYRKGN
PDILPESPAIEQDKNSLSMPKNVFPLTTPAFTRVSEGGWFIDKTPSGKKENTFLDLSDDQ
GNHRKTISELQDSKDNSLLESEGKRKNRLKRTRRKTEDHQKVDGEIENVLQKKARTQTLE
LQIPTVKFEDVGGNDVTLKEICKMLIHMRHPEVYHYLGVVPPRGFLLHGPPGCGKTLLAQ
AIAGELELPILKVAATEIVSGLSGESEQQLRALFEQAVSNAPCILFIDEIDAITPKREVA
SKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD
EASRERILRTLCRKMKLPEAFDFRHLAHLTPGYVGADLMALRQEAVSCAVDRVLLKLNVM
KHKDDRSGNMTTEGSLVELMETENCLKPQDLPVKDELLRLLELLKDQNSIPEEQLQMLCI
EMNDFIVALSKVQPSAKREGFVTVPNVTWSDIGALEDIREELTMAILAPLRYPDQVKALG
LMTPAGILLAGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSESAVRQVFQRAR
NSAPCVIFFDEIDGLCPQRAKVESAVSDRVVSQLLTEMDGVESRQQVYILAATNRPDSID
RAILRPGRLDKILFVGLPSPADRFAILKTITKNGTTPPLDVSVSLEAIAYDPRCDYFSGA
DLYLLIREASICVLRQEMASHKSGDKKGEVKVSQEHFEEAFKKVKPSTSKEDQMMYEKLR
QSLSR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagtgccataggtgggtgtgagcgttcttttgtaacagccggtcaggtaaat
caggcattctccagagcagttccagcggcgaggtccccgacttcctgttggagacctggg
tgcctcagtctggagatttcttcagacatgaaacctcgagtcgttacctacgtggaccga
aagctgaaaaggcgcatcgtacagtatctgagcagtagtgaatgtggaaaatatgtggac
attggcaccttagcatccgatttgcaagaaatgtacagtgtagattatggccggaggaag
agaaatgcttttagaattcaggtagaaaaagtttttagcataatcaagagagagaaagaa
cttgaagacttaactgaattagaagatgaacacctgtcaaaaagagcaagacaaagtcaa
gagtttaatgaatgtgtagcaaacaaaacagatgatgattcagatgtggacaatttccca
gaacaaccgtctgcaaatcacatgaacaactctttgctatcattataccggaaaggaaat
cctgacattttaccagaaagtcctgcaattgaacaagacaaaaatagtctctctatgcca
aagaatgtcttccctttgacaacacctgcttttaccagggtttctgaaggtggatggttt
attgataaaactccaagtggaaaaaaagagaatacttttttagacctttcagatgatcaa
ggcaaccataggaagacaatttctgaattacaggattcaaaagataattctcttctagag
agtgaaggaaaaagaaaaaacagacttaagagaaccaggaggaaaactgaggatcatcaa
aaagtagatggagaaatagaaaatgttttgcaaaaaaaagccagaactcaaactctagag
ctacagatccctactgtgaagtttgaagatgtagggggcaatgatgtgacactgaaggaa
atatgtaaaatgcttatccatatgcgtcatcctgaagtataccactatcttggtgtagta
ccacctagaggatttcttttacatggacctccaggttgtggaaaaacattacttgcacaa
gcaattgctggggagcttgagctgccaattcttaaagtagctgctactgagattgtgtct
ggattgtcaggggagtctgagcagcaattgagagcactctttgaacaggctgtgtcaaat
gcaccttgtattctttttattgatgaaattgatgctatcacccccaaaagagaagttgct
tcaaaagacatggaacggagaattgtggcccagctcctagtctgcatggatgacctaaat
aatttggctgctacagcgcaggtcttagtaattggagctaccaacagaccagactcacta
gacccagcattgagacgtgcaggaaggtttgacagagaaatttgtttgggtattccagat
gaagcatccagagaaagaattcttcggactttgtgtagaaagatgaagctccctgaggct
tttgattttcgtcacttagcccaccttacaccaggttatgttggtgctgatctaatggca
ctgcgtcaggaagctgtcagctgtgctgttgatagggttctgttaaagctaaatgtgatg
aagcacaaagatgatcggtctggaaatatgacaacagagggaagtctggtagagctgatg
gaaacagaaaattgtttaaaaccacaggaccttcctgtaaaggatgaattactgaggcta
ctagagttattaaaggaccaaaactccatcccagaagagcagctgcaaatgttatgcata
gaaatgaatgatttcattgttgctttgtccaaagtacaaccttctgctaagagagaaggc
tttgtcactgtccctaatgtgacctggtcagatattggagcactggaagatattcgagag
gagctcaccatggcaatattggccccattgcgctatccagatcaggttaaagctcttgga
ttaatgactccagctggtatccttcttgcaggaccacctggctgtggcaagacactcttg
gcaaaggctgttgcaaatgaatgtggactgaatttcatttcagtgaagggccctgaattg
ttaaatatgtacgttggacagagtgagtcagctgtgcgacaggttttccagcgggctaga
aattcagcaccatgtgtcatcttctttgatgaaatagatggattgtgccctcaaagagca
aaagtggagtcggctgttagtgaccgggtggtgagtcagcttcttacagaaatggacggt
gtggaatcccggcagcaggtttacattctggcagccaccaacaggccagattctattgac
cgagctatcctacgtcctggccggctggataaaattctttttgtgggtttgccatctcct
gctgaccgttttgccatcttgaaaacaatcacaaagaatggtaccacacctcccctggat
gtttctgtcagtttggaggccattgcttatgaccctcgatgtgattatttctcaggtgct
gatctttatcttctgatacgagaagcttccatctgtgtcttaagacaggaaatggcaagt
cacaagagtggggataaaaaaggagaagtcaaggttagccaggagcactttgaagaagct
tttaaaaaagtgaaaccttctacgtcaaaagaggatcaaatgatgtatgaaaaacttcgg
caatctctcagcagatag
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