Antechinus flavipes (yellow-footed antechinus): 127559626
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Entry
127559626 CDS
T08818
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127559626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127559626
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127559626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_IPO9_c
RTP1_C1
DUF6005
DUF6202
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
127559626
NCBI-ProteinID:
XP_051849505
LinkDB
All DBs
Position
4:94536451..94591703
Genome browser
AA seq
2143 aa
AA seq
DB search
MTSLSQQLQRLALPQNDPSLLARHEVASLLFDCKEAASIDRDTIFAIGCTGLEELIGIDP
SFQKFESALFSQLAKSLERSVQTKAVNKQLDENISLFLIHLSPYFMLKPAQKCLEWLIHR
FHIHLYNQDSLIGCVLPYHETKIFVRVIQLLKISSPTHKWNWLEPVKMSGVHLAKGTLVT
HCYKDLGFMDFICSLVTKSVKVFSEYPGSSAQLRVLLTFYASTIVSALVSANDISDSLLA
KLFPYIQKGLKSSLPDYRAATYMIICQVSVKVTMEDTFVHSLASQIGKTLTKIPSLIKNG
LGCLIVLLQRQKVEGLGKKLFAHLCNVPDLVSLLHEISVMYDISPLLHYMLPHLVVTIVH
HVTEEEETEELDSHIYARLLEDILKDISLENNLDHLLASTLLEEYISYSSRKEINSKEIS
LLNEQLLPLIRLLESKYPKTLDLVLEDHLKDVTDPQKQEFFHQFISLSTSGGKFQFLADS
DSCLTLSLNHPLAPVRLLAVNHLKNIMETSKDNIDASFIKEAIIMRLGDDNLDVVLSAMN
AFVVFKKEFSPEETVSSLLRLFQRAELSQDGAWYKILELAADTLIKEEILNGNDELLNQV
VIHLLPFMVVTNDNSKSQEIKMATYLSKSGICSLHPILKGWKEALEKVIKTTKPTELIGV
ANQKMVQLLADNINSGNPSSMLKMVEDLIAVGEKESYTLKQKVTSQVVISVLVSCCSSLK
ETHFPFALKVFNLLERKIRENEVITSLEISFECHSELSDKGIPVEIWIQYVEKLNRGQMI
AVEDAVMIAFSLKNFIQVLKPPKSFLKDDKWWNPEHMKEDSRDYLHLLIQIFEVIIAGAD
ALCFRVLMKLFLKVHLEDVFELFKFFSLLWTYNYSLSNPLNYNVKTILQTQALYIGRAML
AGQAAQKKKYLASTSSPVVICLLINLGSPIREVRRAAILCLQTLREVESPLYPVIQHLVQ
KEEEIISDATYVAQDLNTLFEDLQTGKKPKSHQMLTEALKHLLYCVHSCPSYIAKNLMKI
LQEVNSEMVLSQLLPTIDQLLEKVLKEPPTVLKDEAVILHLALGKYNEHSASLLHKDPQS
LDVFLKAVHTTKEVFEGMPTFQILALGKITKPFFAAISDDKVQQKLLGVLFDLLLNCKNT
LCAQTVSSVFKTISVDAEQIRLELEPPEKTKSLGTIQQTRRQKMQQKKLQDTEPAQDVGN
VYWQRVTLILELLQHKKKLKSPQLLVPCLFNLLSRCLETLPPEQGNLEYTKQLILSCLLN
ICQKLSPDGSKIPKGILDEEKFNVELLVQCVRVSEMPQTHHHALLLLGAVAGIFPDKVLH
NIMPIFTFMGANVMRLDDTYSFQVINKTVKMVIPALIQADSGKSADVTRNIEEVVVKIIN
VFVDALPHVPEHRRLPILVQLVDTLGAEKFLWILLLLLFEQYVTKTVLVAAHGEKDAILE
TDTEFWISVSCEFTVQQQLQSLMNILRYLTKLPEKKEGEEPPKTGSHKTKTLEQMVQVFN
VDTHTSKQLRHFTFLSVSFMSQLLASHNFIKKVMENGGAVALQGLEQRLLETVLGYINSV
AQSVEENADKLTAKFWRALLSKAYDLLDKVNSLLPTETFVPVIRGLLTNQLPSVRRKAMD
LLNNKLHQYAKWKKGQVTLFLKLVPDLLDIAQHKIKEKEEEQAINRQTALYSLKLLCKNF
GTENSEVFIPVLSAAINLINPEVKDEKNVLGSALLCIAEVTYVLGALAIPHLPRLMPALL
TTLENTNELISSEVYLLSALAALQKVVETLPHFLSPYLQGILIQAIRWETVVKEMSPTSQ
ATLRVTSLKATLATTLSSRVLLSALNTVYKQIGKNWKNRIGPFMSLLQEHIAVMEKEDLN
SHQSQLTAFFLEALNFRSLHPEDNLEEVGQTEGCIVSCLVSMVMKLSEVTFRPLFFKLFD
WARTEDAPKDRLLTFCNLADCIAEKLKGLFTLFAGHLVKPFADTLNQINISKTDEAFFDS
GNEPEKSCLLLQFILDCLHKIFLFDTQHFVSKERAEALMMPLVDQLENMLGGEETFQERV
TKHLIPCIAQFSVAMADDSLWKPLNYQILLKMRHSSPKVRFAALITVLELAEKLKENYIV
LLPESIPFLAELMEDECEEVENQCQKTIQQLEVILGEPLQSYF
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttatcgcagcaactacaacgtcttgctctccctcaaaatgatcccagtctc
ttggctaggcatgaggttgcatccttgctatttgattgtaaggaagcagccagcattgac
agagataccatctttgctataggatgtactggccttgaagagcttattggaatcgaccct
tcatttcagaagtttgagtctgctttattcagtcagttggcaaaaagtttggagaggagt
gttcagactaaggcagtaaacaaacagctggatgaaaatatctcattatttcttatacac
ttgtctccttatttcatgctaaaaccagcacagaagtgcctggaatggttgattcacaga
tttcatatacatctttacaatcaagatagcctgattggttgtgttcttccatatcatgag
acaaaaatatttgtccgtgttatacagcttctaaaaattagtagtccaacacataaatgg
aattggttggaacctgttaagatgtctggggttcatttagccaaaggaactttggttacc
cattgctacaaagaccttggtttcatggattttatatgcagtctggtaaccaaatctgta
aaggttttttcagagtatcctggaagttcagctcagttgagagtcctactgactttttat
gcttccactattgtgtcagctttggtgtccgctaatgatatatcagactctttacttgct
aagctcttcccctatattcaaaagggattaaagtcatctttgcctgattatcgagctgca
acctacatgataatctgtcaagtctcagtgaaagtgacaatggaggatacttttgttcat
tctttggcatcacagattggcaaaactttgactaaaattccctctttgatcaagaatgga
ttaggttgcttgattgtgctcttgcagagacagaaagtagaaggccttgggaaaaagcta
tttgctcacctgtgtaatgttcctgatcttgtttccttactacatgaaatttcagtgatg
tatgacattagtcctcttctgcattacatgcttcctcatcttgttgtcaccattgttcat
catgttacagaagaagaagaaactgaggaactggacagtcatatatatgctagactctta
gaagatatacttaaagatatatcattggaaaacaacttagaccatttgttggctagcact
cttcttgaagaatatatttcatatagttcaaggaaagaaataaattctaaggagatatca
ctactcaatgaacaactccttcctctcattagacttttggaaagcaaataccctaagaca
ttagatttggtattggaggaccatctgaaggatgttacagatccccaaaagcaagaattt
tttcatcaatttatttctctctccacaagtggaggaaaatttcagtttttagcagattct
gattcttgcctcacgctgagcttgaaccatccactggctccagtgagacttttggcagtt
aaccatctgaaaaatattatggaaacatcaaaggacaatattgatgcttcttttataaaa
gaagctattataatgcgtcttggtgacgataatttagatgttgttctgtcagccatgaat
gcttttgtggttttcaaaaaagagtttagcccagaagaaacagtttcaagtcttttgaga
ctttttcaaagagcagaactttcccaggacggggcgtggtacaaaatacttgaattagca
gccgacactctaattaaagaagagattctgaatggaaatgatgagttactaaatcaagtg
gtcatacatttgctgccatttatggttgttaccaatgacaattcaaaatcccaagagata
aaaatggctacttatctgtcaaaatcaggaatttgctctttgcaccctatactgaaagga
tggaaagaagctcttgaaaaagtaattaaaaccacaaagccaacagaattgattggtgta
gcaaatcagaaaatggttcagttgttggctgacaatataaattcagggaatccatcttcg
atgttaaagatggtggaggatttgatagctgttggtgaaaaggagagctacacattgaag
cagaaagtaacttcccaagttgtcatttcagttcttgtctcttgctgctcttcattaaag
gaaactcactttccatttgcattgaaagtcttcaatttgctggaaagaaaaataagagaa
aatgaagttattacttcgttggaaatctcttttgaatgtcattctgaactgtcagacaaa
ggaataccagtggagatatggattcagtatgtagaaaagctcaacagagggcagatgatt
gctgtggaagatgctgttatgattgcattttcattgaaaaactttattcaagttttgaag
cctcctaaatcttttcttaaagatgataagtggtggaatcctgaacatatgaaagaagac
agccgagactatctgcacttattgatccagatatttgaggttattattgctggtgctgat
gccctttgcttcagagttctgatgaaacttttcttaaaggtacatttagaagatgttttt
gagttattcaagttcttctcacttttatggacctataattatagcctttcaaatccactt
aactataacgtgaaaacaatactacagactcaagctctttacataggacgtgcaatgctg
gcaggtcaggctgcacagaagaaaaaatacctggcatcaacatcttctccagtggtgata
tgtttactcataaatttgggaagtcctataagagaagtacgaagagctgccattctctgc
ctccagaccttacgtgaagtagagtctccactttatcctgtaatacaacacttagtccaa
aaagaagaggagattatttcagatgctacatatgtagcacaggatttgaatactttgttt
gaggatctgcaaacaggaaaaaagccaaaatctcaccagatgttaactgaagccttaaaa
catttgctttattgtgtacatagctgtccatcctatattgcaaaaaacttgatgaaaatt
cttcaggaagtcaatagtgagatggtgctttctcagctgttgcccacaattgatcagttg
ctagagaaagtactaaaggaaccccctacagtcctgaaggatgaagctgtcattttgcac
cttgcccttgggaagtacaatgagcattcagcttctctcttgcacaaggacccacagagt
ttagatgtattcctcaaagctgtgcataccaccaaggaagtcttcgaagggatgcctaca
ttccagatccttgcccttgggaagattacgaaaccattctttgctgctatatcagatgat
aaagttcaacagaagcttttgggagtgctgtttgatttacttttgaattgcaaaaataca
ctctgtgctcagactgttagcagtgtttttaaaacaatttctgttgatgctgaacaaatc
cgattagaactggaaccaccagagaaaaccaagtccttgggtacaattcagcaaacaaga
agacaaaaaatgcaacagaaaaaactacaagatacagaacctgcacaagatgttggcaat
gtttactggcagagagtaaccctcatcttagaattactgcaacataaaaagaaactcaaa
agtcctcagttattagtgccatgtctttttaatttgctctccaggtgtctagaaactttg
ccaccggagcagggaaatctggaatacaccaaacagctaattctcagctgtctacttaat
atctgccagaaactatccccagatggttctaagatccctaaaggtattcttgatgaagaa
aaattcaatgttgaattgttagttcagtgtgtgcgggtttcagagatgcctcagacacat
caccatgccctcttgcttttgggtgcagttgctggaatattccctgataaagttttgcac
aacattatgcccatttttacattcatgggagccaatgttatgcgccttgatgatacttat
agttttcaagttatcaacaagacagtgaaaatggtcattcctgctcttatccaggctgac
agtggtaagtctgcagatgtcacaaggaacatagaagaagttgtggttaaaattataaat
gtgtttgtggatgctctacctcatgttcccgaacacagacgcctgcccatccttgtacaa
cttgttgacactcttggtgcagagaaattcctctggattctcctgctgttgctttttgaa
cagtacgtcactaaaacagtgttggttgctgcccatggagaaaaggatgctatcttagag
actgacactgaattttggatatcagtctcttgtgaatttactgtccagcagcagctccaa
agtttaatgaatatactcagatacttaaccaaacttccagagaaaaaagaaggggaagaa
cctcccaaaacaggatctcacaagaccaagacactggaacagatggtacaggttttcaat
gtggacactcataccagcaagcagctccgacattttacatttttgtctgtgtcctttatg
tctcaactcttggcttcccataattttatcaaaaaggtcatggaaaatggtggtgctgtg
gctttacaaggccttgaacaaagattacttgaaactgttcttggttatataaattctgtg
gcacagtcagtggaggaaaatgcagacaaattaactgcaaagttttggcgtgctctcctg
agtaaagcttatgatttgcttgataaagtcaattccttattgcccacggaaacttttgtt
cctgtgataagaggattgctgactaaccaactgccttctgtccgtcgtaaagcaatggac
ctcttaaacaataaactgcatcagtatgcaaagtggaaaaagggacaggtgacccttttc
ttgaaactggttccagatctcttggatattgcacagcataaaataaaggagaaagaagaa
gaacaggctatcaacagacagactgccttgtacagtttgaagttactctgcaaaaatttt
ggcacagaaaattcagaggtttttatccctgtattgagtgcagccattaatctgatcaat
ccagaggtgaaggatgagaaaaacgtattgggaagtgctttgttgtgtatagctgaggtc
acctatgtactgggagcactagcaatacctcatctgcccagacttatgcctgcattattg
actaccctggagaatacgaacgagctgatctcaagtgaggtttacttgcttagtgcattg
gcagccctccagaaagttgttgaaactcttccacattttctcagcccatacctacagggt
attttgatacaggcaatccgttgggagacagttgtgaaagagatgagtcctacttcccag
gcaactctccgagtgacatccctaaaagcaacactggctactacactttcttcaagagtt
ttactatcagcactcaacacagtttacaagcaaattggaaagaactggaagaatcgaata
ggtccatttatgagcctccttcaagagcacattgcagtaatggagaaggaagacctcaac
tctcatcagtctcagttaacagcatttttcttggaagccttgaacttcagatcattacac
ccagaggataacctagaagaagttggtcaaactgaaggttgtatagttagctgtctagtg
agcatggttatgaaactttctgaagttactttcagacctctcttctttaagctatttgat
tgggccagaacagaagatgctccaaaggacaggctgctgacattctgcaacttagcagat
tgtattgctgaaaaactgaaaggtctttttaccctatttgctggtcatttagtgaaacct
tttgctgacactttgaaccaaatcaacatctctaaaacagatgaagccttttttgactct
ggaaatgaacctgaaaagagctgtttgttactgcagtttatattggattgtctgcacaaa
atctttctttttgacactcagcattttgtaagcaaagagagagctgaagcactgatgatg
cctctggtggatcagctggaaaacatgcttggaggagaagagacattccaggaaagagtg
acgaagcacctgataccatgtattgctcagttttctgtagccatggcagatgattctctt
tggaaaccattgaactaccaaattctccttaagatgcggcattcttcacctaaggttcga
ttcgctgccttgattacggttttagagctggctgaaaaactaaaggagaactacattgtg
cttctccctgaatccattcctttcttagcagagctgatggaagatgaatgtgaagaagtg
gaaaatcagtgccagaagactattcaacaactggaagtcatcttgggagagccactccag
agctatttctaa
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