Antechinus flavipes (yellow-footed antechinus): 127559904
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Entry
127559904 CDS
T08818
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127559904
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127559904
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
Helicases
127559904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SR-25
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127559904
NCBI-ProteinID:
XP_051850021
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Position
4:113695729..113722570
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AA seq
618 aa
AA seq
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MDAHDLFRRLGAGAKFDLRRFQTDAARFQLGKRKFDFDSSEVLEELNFFGRKKPTPAENE
ASLDNTLSKEDKRLQQKAEGEEDNRIERKRKRNMKKEKQTSETISVSSNKEEETILWMSS
LEAKIKNKKGKEENKLTAEKLERLRKQKINCLRNKHKIHIQGTDLPEPITSFQQLDQEYK
IHSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPT
NKGFRALIISPTRELASQTHRELVRISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVT
TPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAM
FSATFAHDVEQWCKLNLDNVISISIGARNSAAETVEQELLFVGSETGKLLAMRDLIKKGF
HPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTAL
LARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVI
QQAGCPVPEYIRSFHKLPSKQKKKMIKKPLERQSINTTPKFFLENDESEKKITHQNAGKK
TVPTKTRNNQISKTIPEI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctgtttcgtcgcctcggcgccggagccaagttcgacctgagacgc
ttccagacggacgcggcccgattccagctaggaaaaaggaaatttgactttgattcttca
gaggtattagaggaactgaacttctttggaaggaagaaacctacccctgctgaaaatgaa
gcctcattggataataccctctccaaggaagataagagactacagcaaaaagctgaaggt
gaagaggataacagaattgaaaggaagaggaaacggaacatgaaaaaagaaaaacaaact
tctgaaactatttcagttagttccaacaaggaagaagagactatactatggatgtcttca
ctggaagccaagattaaaaataaaaaaggaaaagaagaaaataaactaactgcagagaaa
ttggaacggctccgaaagcaaaagataaactgcctccgaaataaacacaaaattcacatc
caaggaactgatcttccagaacctattacttcatttcaacaacttgaccaggaatataag
atccactctcgactactccaaaacatcttagatgcaggtttccagacccccacgccaatc
caaatgcaagcaattcctgtcatgcttcatggtcgtgaactgttggcttctgcccctact
ggatctggaaagaccttggcttttagcattcctattttaatgcagttgaaacaaccaaca
aataaaggcttcagagcactgatcatatcgcccacacgagaacttgccagccagactcat
cgagagttagtaagaatctctgagggcacaggattcagaatacatatgatacacaaggca
gctgtggcagccaagaagtttgggcctaaatcatctaagaaatttgatattcttgtgact
actccaaatcgactaatttatttgctgaaacaagatcctccaggaatagacctaaaaaat
gtggaatggttggtggtagatgaatctgacaaattgtttgaagatggaaaaactggtttc
agagaccagctggctttcattttcctggcttgcacatcccacaaggtcaggagagctatg
ttcagtgcaacgtttgcacatgatgtggaacagtggtgtaaactcaacttggacaatgtt
atttctatttccattggagcaaggaattctgcggcagagactgtggaacaagaactccta
tttgttggatctgagacaggcaaacttctagccatgagagacctaattaagaagggtttc
cacccacctgtccttgtttttgttcaatccattgaaagagctaaagaacttttccatgaa
ctcatttatgaaggtattaatgtggatgtgattcatgcagagagaacccagcagcagaga
gataacacagtccatagtttcagagcaggaaaaatctgggtcctcatctgcacagccttg
ttagcaagaggaattgattttaaaggtgtgaacttagtaatcaactatgactttccaacc
agtgcagtggaatacatccataggataggtcgaactggaagagcaggacataaagggaag
gctgttacattctttactgaggatgataagccattattacgaagtgttgccaatgtgata
cagcaagcaggatgccctgtgccagagtacatcagaagtttccacaagcttccaagcaaa
cagaagaagaagatgattaagaaaccattggaaaggcaaagcattaatacaacgccaaag
ttttttttagaaaatgatgaaagtgaaaaaaaaattactcatcagaatgctggaaagaag
acagtacctactaaaaccagaaataatcagatttcaaaaactattccagaaatataa
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