Antechinus flavipes (yellow-footed antechinus): 127559949
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Entry
127559949 CDS
T08818
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03440
Homologous recombination
afz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127559949
03460 Fanconi anemia pathway
127559949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afz03400
]
127559949
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127559949
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127559949
FA (Fanconi anemia) pathway
Downstream FA components
127559949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
127559949
NCBI-ProteinID:
XP_051850075
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All DBs
Position
4:complement(116661164..116879328)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSSTQSEYIIGGVKIHFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPGEENLNKKTEVPLPCCCTCHLHNPTNDISVNVNQGASCSFISPIMASSM
KNETSACQEDSTPKITLAAKLSAKKQASLLSDEKDDFQVDKKRIRPLETKQQVRKRSCFA
KDLDTKVAPERIVKPNSPLGKKITFSPQKIPGPCTRCSCSTKNEKSQDDNITKKEHGGIY
KTPKIFFGTRTHKQIAQITRELRRTAYSGVRMTILSSRDHTCVHPEVIGNFNRNEKCMEL
MDGKNGKSCYFNHGVHKISEQHVLQTLLGMHRAWDIEDLVGLGKKLKACPYYAARELMQD
ADIVFCPYNYLLDSQIRESMDINLKEQIIILDEAHNIEECARESASYSVTEVQLRFARDE
LDIMVSNNIRKKNHEPLRAVCYSLINWLQENAEHLEERDYESSYKVWSGNEMISHFYKMG
ITAATFSVLQGHFTAVLQKEEKVTSLNGKEQVKEIPIVSPSTQIMLKGLFMVLDYLFRQN
SRFADDYKVAIQQTYSWTSQNDIPDKNGFFVLSKNKKRSRQKMAVSVLNFWCLNPAVAFS
DITCNIRTIVLTSGTLSPMKSFSSELGVTFAIQLEANHVIQNSQVWVGTIGSGPKGRNLC
ATFQHTETFAFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKERWIHTGLWHNLELVK
TVITEPQRGEKVVFDEVLQVYYDAIKCKGDRDGALLIAVCRGKVSEGLDFSDENARAVIT
IGIPFPKVNDLQVELKRKYNDQHSKRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL
ILVDDRFRSNPDRYISGLSKWVRQQIKHHSTFESALESLAAFSKKHQKIIDVSSSDNNES
VQEVASLKDESSTSLLESTIHLSRNVLQKDERKPFVQELQAPRTMAVELKLHSHLCNIIT
AQNKNDSLFLEDSPQKIKRENFLISRSTSPTFNKQTERNSCPESNSGKKYFSPKSLTSTP
LHRFSENDDFSTFPSKKEKRESTVDLSLINRGQSSSLSGPQSETITSSLKRTNTDSKKDP
AEQLLCPEEALDQDIDLSPVHGEAGFSKVNEDIESTEEDESIFFTPELYDDAESEAEENE
ELLENGGINQRTENSNYVIAENLLEIDHTKGMSSDYTDMRLIRNMQNEEYKVDDLSNNVK
VANIYEQELQKTQETDPIGNIST
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacacaatctgaatacattattggtggagtgaagattcacttcccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgttagaggattaaatagtaaacaa
cactgtttgttggagagccccacaggaagtgggaaaagcttagccttactttgttctgct
ttggcatggcagcaatctctcagtgaaaaaccaggagaggagaacttgaataaaaagact
gaagtacccttgccatgttgttgtacatgtcatttgcacaaccccactaatgatatcagt
gttaatgtgaaccaaggagcttcatgttctttcatcagtccaatcatggcatcttccatg
aaaaatgaaacctctgcttgccaagaagactctactccaaaaatcacgctagctgcaaaa
ttatctgccaagaaacaggcatctttgcttagcgatgaaaaggatgattttcaagtagac
aagaaaaggattcgtcccttagaaaccaagcagcaggttagaaagcgttcttgctttgca
aaggatttagatacaaaagttgcaccagaacggattgtgaagccaaattctccattgggg
aaaaagataaccttttctccacaaaagattcctggtccttgtactcgctgttcctgttcc
actaaaaatgagaaaagtcaagatgataatataacaaagaaagaacatgggggaatatac
aagacacctaaaatattttttgggactcgtacacataaacagatagctcagattactaga
gaactgcggaggacagcatattctggggtccgaatgactattctttctagcagggatcat
acttgtgtccatcctgaagtaatcggtaatttcaacaggaatgaaaaatgtatggagctg
atggatggaaaaaatggtaaatcctgttatttcaatcacggtgtccataaaattagtgaa
caacatgttctacagactttactagggatgcacagggcctgggatatagaagatcttgtg
ggcctgggaaaaaagctaaaggcctgtccatattatgcagctagagaattaatgcaagat
gctgacatagtgttctgtccctacaactatctcctagattcacaaataagggaaagtatg
gatatcaatctgaaagagcagatcatcattttagatgaagcccataatattgaagaatgc
gcacgtgagtcagccagttacagtgttacagaagtccaacttaggtttgcccgagatgaa
ttagatatcatggtcagcaataatataaggaagaaaaatcatgaaccccttcgagctgtg
tgctatagccttataaattggttacaggaaaatgctgaacatcttgaagaaagagattat
gaatcatcctataaagtgtggagtggaaatgaaatgatttctcacttctacaaaatgggc
ataactgctgctaccttttcagtattacagggtcattttactgctgtgcttcaaaaagaa
gaaaaagtcacgtcacttaatggtaaagagcaagtcaaagaaatacctattgttagtcct
tcgactcagattatgctcaaaggactttttatggtactggactatctttttaggcagaat
agcaggtttgcagatgattacaaagttgctatacagcaaacttactcttggacaagccag
aatgatattccggataaaaatggtttctttgttttatctaaaaataagaaacgttctagg
caaaaaatggcagtcagtgtgctaaatttttggtgcttgaatccagctgtggccttttct
gatattacatgtaatataaggacaattgttctgacatctggtactctgtcaccaatgaaa
tctttttcatctgaacttggtgtgacatttgctatccaattagaggctaatcatgtcatt
cagaactcacaggtttgggttggcactattgggtcaggtcccaaagggcggaatctctgt
gccaccttccagcacacagagacctttgcattccaagatgaagttggagcacttcttttg
tctgtgtgccaaacagtgggccaaggaattttgtgcttcttgccatcttacaagttactg
gacaaattaaaagaacgttggatacatactggtttatggcataaccttgagctagtgaaa
acagtcattacggaaccacaaaggggagagaaagttgtatttgatgaagtgttacaagtg
tactatgatgcaatcaagtgtaaaggagaccgagatggtgcccttcttatagcagtttgc
cgaggtaaagtgagtgagggactggatttctcagatgagaatgctcgtgctgtcataact
atagggatcccatttccaaaagtgaacgatcttcaggttgagttaaagagaaaatacaat
gaccaacattcaaaacgaggtcttttacctggccgccagtggtatgaaattcaagcttat
agagccctgaaccaggcacttggcaggtgtattcggcacaaaaatgattggggagctctt
attttagttgatgatcgcttcagaagcaacccagatcgatatatatctggtctttccaaa
tgggttcgtcaacagattaagcaccattcaacctttgaaagtgcactggaatccttggct
gcattttctaaaaaacatcaaaaaatcattgatgtgtcatcttcagataataatgagtct
gtgcaagaagtagcatctttaaaggatgagtcctcgacatctttattagaatcaacaatt
cacctatcacgaaatgttcttcaaaaagatgaaaggaagccttttgtccaagaacttcag
gctcctagaacgatggctgtggagctcaaactacatagtcacctgtgtaacatcatcaca
gcccagaataaaaatgattcattatttttagaagattctccccagaaaataaagagggaa
aattttttaatatccagatccacaagtccaacctttaataaacaaacagaaaggaatagc
tgtcctgaatctaactctgggaagaaatattttagccccaagtcactgacttccacacct
ctgcacagattttcagagaatgatgacttcagtactttcccttccaaaaaagaaaagcgg
gaaagtacagttgatctgtctctcattaatagaggccagtcctcttccttgtcaggccca
caatcagaaacaatcacttcatcgttaaaaaggactaatactgatagtaaaaaagatcct
gctgaacagcttctctgccctgaagaagctctggatcaagacattgatctgagtcctgta
catggagaagctggattttccaaagtaaatgaagatattgaatcaacagaagaggatgaa
tctatctttttcacaccggaactttatgatgatgcagaatccgaggcagaagaaaatgaa
gagctacttgaaaatggtggaataaatcaaaggactgagaattcaaattacgttatagca
gaaaatcttttggaaattgatcacaccaaaggaatgagttcagattacacagacatgagg
ttgattagaaacatgcaaaatgaagaatataaagttgacgaccttagtaataatgtaaag
gtggcaaatatatatgaacaagagctgcaaaagactcaggaaacggaccctataggtaac
atcagcacatga
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integrated database retrieval system
