Antechinus flavipes (yellow-footed antechinus): 127559987
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Entry
127559987 CDS
T08818
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127559987
03036 Chromosome and associated proteins [BR:
afz03036
]
127559987
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127559987
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127559987
SLIK complex
127559987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
127559987
NCBI-ProteinID:
XP_051850147
LinkDB
All DBs
Position
1:complement(188865697..188980524)
Genome browser
AA seq
1802 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
HSDSESDTSREKKVQSKPPKVDSSEFWKSNPSILAVQRSAMLRKQQQQQQQQQTSSNSGS
EEDSSSSEDSEDESSSEVKRKKHKDEDWQMSGSGSPSQTGSDSESEEEREKSSCDESESD
YEPKNKVKSRKPQIRTKAKNGKKISGQKKRQIDSSEDDDDDDDYDKRGSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQPEEDEFETIERFMDSRIGRKGATGATTTIYAVEADGDP
NAGYEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQLRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGPEGLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWAPQMNAVVYLGDINSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLKERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSRNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDNSSGQDRTGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELVPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAKKEAQ
RLSGAGNSKRRKIRTKKNKMVKTVKTREEIRSDSSPLPSDKSDEDDDKDEITSVKHPNRK
VKAEKDSEEKSEPDVCVKKEQEEKREAKEKENKRELKRERKEKEDKKDIKEKDIKEKRES
KIKEAMQKDKDIKEEKLSETKSDSKEKSKKSTISDAPVHITASGEPVPISEDSEELDQKT
FSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQDSQQNNDQNSSSMNTHMIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHKDRHQGDAYKKNESRKRSYSSFSNGKDHREWDHYKQ
ESRYYNDSKHRKMDDHRSRDHRSVLEGSLKDRSHSEHRSHSDHRLHSDHRSSSEYSHHKT
SRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSR
KT
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagcgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcctctggttctggttctggatcaagctctggaagcagtagt
gatgggagcagcagtcagtcaggcagcagtgattctgattccggctctgactcaggcagt
cactctgattctgagtcagatacttctagagaaaagaaagttcaatcaaaaccaccaaaa
gttgatagctctgagttttggaaatcaaatcctagtattctggctgtccaaagatctgca
atgcttagaaagcaacagcagcagcagcaacaacaacaaacttcctccaatagtggatca
gaagaggattcctctagcagtgaagattctgaagatgagtcatctagtgaggtcaagagg
aaaaaacataaagatgaagattggcagatgtcagggtcaggatctccctcccagacgggt
tcagattctgaatcagaagaagaaagagaaaaaagcagttgtgatgaaagtgaatctgac
tatgagccaaaaaataaagtcaaaagcaggaaacctcaaatcagaactaaagcaaaaaat
gggaagaagatctctggccagaagaagagacagattgattcctctgaagatgatgatgat
gatgatgattatgataaaagaggttctcgtcgccaggctactgtcaatgttagttataag
gaagatgaagaaatgaaaactgattcagatgatttattggaggtttgtggagaggatgtt
cctcaacctgaagaagatgaatttgagacaatagaaaggtttatggacagtagaattgga
agaaaaggagcaactggtgctactacaaccatctatgcagttgaagcagatggtgatcct
aatgctggatatgaaaaatctaaggaaccaggagagatccagtatttaattaagtggaaa
ggatggtctcatatccataatacttgggagactgaagaaaccttaaaacagcagaatgtg
aaaggaatgaaaaaattagacaattacaagaaaaaagatcaggaaaccaaacgatggttg
aaaaatgcttcgccagaagatgtggagtattataattgtcagcaagaacttacagatgat
ctacataagcagtatcaaatagtagagagaataattgctcattccaatcaaaagtcagca
gctggatatcctgattattattgcaaatggcagggtctcccatattcagagtgtagctgg
gaagatggagcccttatttccaaaaagttccagttacgcatagatgaatatttcagcagg
aatcaatccaaaaccactccctttaaagattgcaaagtattaaaacaaaggccaagattt
gttgcactgaagaagcaaccatcctatattgggggaccagaaggtttagaattaagagat
tatcagttgaatggtctaaattggcttgctcattcttggtgcaaaggaaatagctgtata
cttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttcttaactatctt
ttccacgaacatcaattatatgggcctttcttgttagtagtaccactttctacacttact
tcctggcaaagagagattcagacatgggctccccagatgaatgctgtggtctatttaggg
gatattaacagcagaaatatgataagaacacatgaatggatgcatcttcagaccaaacgg
ttaaaatttaatattcttttgacaacttatgaaattttattgaaagataaggcattcctt
ggtggcctgaattgggcattcataggtgtagatgaagctcatcgattaaagaatgacgac
tcacttttatataagactttaatagactttaaatccaatcatcgtcttcttattacggga
acccctctacaaaattctctcaaagagctctggtctttgcttcacttcatcatgccagaa
aaattttcttcctgggaagattttgaagaagaacatggcaaagggagagaatatggatat
gcgagtctccacaaggagctggagccttttctgttacgccgagttaagaaagatgtagaa
aaatctttgcctgccaaagttgagcagattttaagaatggaaatgagtgcattgcagaaa
caatattacaaatggattttaaccaggaattacaaagcccttagcaaaggttcaaagggc
agtacctcaggctttttgaatataatgatggagctcaaaaagtgttgtaaccattgctac
ctcatcaaaccacctgataataatgaattctacaataaacaggaggccttacagcattta
attcgaagtagtggaaaattaattcttctcgataagctgttgattcggctaaaagaacgg
ggcaacagagttctaattttctctcaaatggtgcggatgttagacatacttgcagaatat
ttgaagtatcgtcagtttccttttcaaagactagatggttcaatcaaaggagaattaaga
aaacaagcattagatcattttaatgctgaaggatctgaggacttttgtttcttactttcc
acaagggctggaggactaggcataaatttagcatctgctgacactgttgttatatttgat
tctgactggaatccacaaaatgatcttcaggcacaagctagagcccatagaattggacag
aagaaacaggttaatatttatcgtctagttacaaagggatcagttgaagaagatattctt
gaaagagccaaaaaaaagatggtgcttgatcacctagtaattcagagaatggacacaact
gggaagactgtactacatacaggttctgctccttcaagttctacaccttttaataaggaa
gagctatcggcaattttaaaatttggtgctgaagaactttttaaagaacctgaaggagaa
gaacaagagcctcaggaaatggatattgatgaaatcctgaagagggctgaaactcatgaa
aatgaaccaggtccattaactgtaggagatgaattgctttcccagtttaaggtggctaac
ttttcaaatatggatgaagatgatattgaattagaacctgaaagaaattcaagaaattgg
gaggaaatcattcccgaagatcaaagaagaaggctagaagaagaagaaagacaaaaggaa
cttgaagaaatatatatgctaccaaggatgagaaactgtgcaaaacagattagcttcaat
ggaagtgaaggccggcgcagcagaagtagaagatactctgggtctgatagtgattcaata
tctgaaagaaaaaggccaaagaaacgtggaagaccaaggactatcccacgagagaatatt
aaaggatttagtgatgcagaaattaggcggtttatcaagagttacaagaaatttggtggt
cctctggaaagattagatgcgattgctcgagatgctgaattagttgataagtcagagaca
gacctgagacgtctaggggagctggtgcataatgggtgtgtcaaagctttaaaggataat
tcctctggacaggaccgaacaggtggtagacttggaaaagtgaagggtccaacattccga
atatcaggagtacaagtgaatgccaaactagttatctctcatgaagaagaattagtacca
ttgcacaaatcaattccttcagatccagaagaaaggaaacagtataccatcccatgtcat
acaaaggcagctcactttgatatagactggggcaaagaagatgattccaatctattaata
ggtatctatgaatatggctatggcagctgggaaatgattaaaatggatcctgaccttagt
ttaacacacaagattctaccagatgatcctgataaaaaaccccaagcaaagcagttgcag
actcgagcagactacctcattaaattacttaataaagatctagcaaaaaaagaagcccag
agactttctggtgcgggaaattcgaagaggaggaaaataaggactaagaaaaataaaatg
gtgaagactgttaaaacgagagaagaaataagaagtgattcttctccattaccttcagac
aaatctgatgaagatgatgacaaggatgagatcacttctgtgaaacatccaaatagaaaa
gtaaaagcagaaaaagacagtgaagaaaaatctgagccagatgtttgtgtaaagaaggaa
caagaagaaaaaagggaagcaaaagaaaaggaaaataagagagaacttaaaagggagaga
aaagaaaaggaggataagaaagatataaaggaaaaagatattaaagaaaaaagagaaagc
aaaataaaagaagctatgcagaaagacaaagacataaaggaagaaaagctcagtgaaacc
aaatctgatagcaaagaaaaatctaagaaatccacaatttcagatgctccagttcatatc
actgcaagtggggaacctgttcctatatctgaggattctgaagagctggatcagaagaca
ttcagtgtatgcaaagaaagaatgaggcctgtcaaagccgccctaaaacaacttgataga
cctgaaaaggggctttcagaaagagaacagctggaacatactagacagtgtctaatcaaa
attggtgatcatatcactgaatgtctgaaagaatatacaaatcctgaacaaattaaacag
tggagaaagaatttgtggatttttgtgtccaagtttacagaatttgatgcaaggaaacta
cacaaattatataagcatgcaattaaaaaacgacaagactctcagcaaaacaatgaccaa
aacagcagcagcatgaatacgcatatgattaggaatccagatgtggaaagactaaaagag
aatacaaatcatgatgacagcagcagggacagttattcttccgatagacatttgtctcaa
tatcatgaccacaaagataggcatcaaggagatgcttacaaaaagaatgagtccaggaaa
agatcatattcatcctttagcaatggtaaagatcaccgggaatgggatcattacaaacaa
gaaagcagatattacaatgatagcaaacacagaaaaatggatgaccatagaagtagggat
cacagatcagttttggaaggaagcttaaaagaccgatctcattctgagcaccgttctcat
tcagatcatcggttacactcagaccatcgatcaagttctgaatattcacaccataaaact
tcaagggattatcggtatcattcagattggcagatggaccacagagcttccagtagtggc
cctaggtcaccattagatcagaggtctccatatggctcaagatctcctttaggtcacaga
tctccatttgaacattcatctgatcacaaaagtacacctgagcatacttggagtagccgg
aaaacataa
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