Antechinus flavipes (yellow-footed antechinus): 127560195
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Entry
127560195 CDS
T08818
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127560195
03015 mRNA surveillance pathway
127560195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127560195
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127560195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
127560195
NCBI-ProteinID:
XP_051850530
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All DBs
Position
4:complement(133786540..133800089)
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AA seq
699 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSAGSRGGGGGGGGPGGGSSSSLRGGRSGGLNSRRAE
GGGLRSPEESECESEDCIEGDAVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSL
AKEDKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
AHNPDDIKPRRIRKPRFGSSPQREPNWANDRPNKPPRHQGSGGSSLPPRTFINRNAAGTG
RMPTSRNFSRAGGYKEGRTGFRSTENGGPHSIRSNDSVKHENGYRSRRLEYIEDGDLSPE
IESSHVLGSPEKEEAASEPPPPIPETVPPPPDRPVEKKSYSRARRSRNKAGDASKLAEEV
PPPVEGPAPAPPPPATTPPTPPKTGNWEAPVDSSTGELEQDMTQLNLTEQNWSPGQPQFL
QPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGSRAKRYSSQRQRPVPEPPAPPVHISIME
GHYYDPLQFQGPIYTHSDSPTPMPPQGMIVQPEMHLPHPGLHPHQTPTPLPNPGLYPPPV
SMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYAPGALPPPPPPHLYPNTQAQSQVYGGV
TYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgacgacggcagcgcgcctcgcaggacacagaggatgaagagtccggagcc
tcgggctcagacagtgccggttcccggggcgggggcggcggaggcggggggcccggcgga
ggctcctcgtcctcgctgcgcggcggcaggtccggaggcctcaactcgcggcgggcggag
ggaggcggtctccgaagtcccgaagagtcggagtgtgaaagtgaagactgcatagaaggc
gatgctgttctctcagattatgaaagtgcagaggattcagaaggagaggaagaatacagt
gaagaggaaagttccaaggtggagctgaaatcagaagctaatgatgctgctaattctttg
gcaaaagaagataaaggagaagaaaagcctgatccaaaaggaactgtgactggcgagaga
caaagtggagatggacaagaaagcacagaacctgtagaaaacaaggtgggtaaaaaggtc
ccaaaacatttggatgatgatgaagatcggaagaaccctgcctacatccccaggaaaggg
ctcttctttgaacatgaccttcgaggccaaactcaagaagaagaagtcagacccaaagga
cgtcagcggaagctgtggaaggatgagggtcgctgggagcatgacaagttcagagaggat
gaacaagcacccaagtctcggcaggagctcattgccctgtatggttatgatattcgatca
gctcacaaccctgatgatatcaaaccccggagaatccgtaaacctaggtttggaagctct
ccacagagagaacctaactgggccaatgaccgaccaaacaagcctccccgtcaccagggc
tctgggggatcctctttgcccccaagaacattcattaatcgtaatgctgctggtacaggc
agaatgcctacatctaggaacttctctcgagcagggggctacaaagaaggaaggaccggg
tttaggtctacagaaaatggagggccacatagtattcgttctaatgactctgtcaagcat
gaaaatggttatcgttctcggcgcctggagtacatcgaagatggggatctgtcccctgaa
atagagtcttcccatgtgcttggcagccccgaaaaagaggaagcagcttcagagcctcct
cctcctatccctgaaactgtaccaccacccccagatagaccagttgaaaagaagtcctac
tctcgtgcaagaagatccagaaacaaagctggagatgcaagcaagttggcagaggaagtg
ccacctcctgtggaggggccggcccctgcacctccacctcctgcaactacccccccaaca
cctccaaagactggaaattgggaagccccagtggattccagcacaggagaacttgagcaa
gatatgacccaactgaatctgacagaacaaaattggagcccagggcagcctcaattccta
caaccaagggagcttcgaggtattcccaaccacatgcacctgggagcaggccctccacct
cagtttaaccgtatggaagaaatgagcgttcagggtagtcgagccaaacgatattcatcc
cagcgtcagagacctgtccctgaaccaccggccccacctgtacacattagtatcatggaa
gggcactactatgacccattgcagttccagggaccaatctacacccacagtgacagccct
accccgatgcctcctcaaggcatgattgtacaaccagaaatgcacctcccccaccctggt
ttacatccccatcagacgccaacacctctgcctaaccccggtctgtaccccccaccagtg
tccatgtccccaggacagccaccaccccagcagctgcttgcccctacctacttctccgct
ccaggtgtcatgaacttcggcagtcccagctatccctatgccccaggggcactgccccct
cccccacctcctcacctataccctaacacccaggctcagtctcaggtgtatggaggagta
acctattataacccagtccagcaacaggtgcagccgaaaccgtctccacctaggcggaca
tcccagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttccagttaa
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