Antechinus flavipes (yellow-footed antechinus): 127560499
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Entry
127560499 CDS
T08818
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04020
Calcium signaling pathway
afz04024
cAMP signaling pathway
afz04080
Neuroactive ligand-receptor interaction
afz04082
Neuroactive ligand signaling
afz04713
Circadian entrainment
afz04720
Long-term potentiation
afz04724
Glutamatergic synapse
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05017
Spinocerebellar ataxia
afz05020
Prion disease
afz05022
Pathways of neurodegeneration - multiple diseases
afz05030
Cocaine addiction
afz05031
Amphetamine addiction
afz05033
Nicotine addiction
afz05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127560499
04024 cAMP signaling pathway
127560499
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127560499
04082 Neuroactive ligand signaling
127560499
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127560499
04720 Long-term potentiation
127560499
09159 Environmental adaptation
04713 Circadian entrainment
127560499
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127560499
05014 Amyotrophic lateral sclerosis
127560499
05017 Spinocerebellar ataxia
127560499
05020 Prion disease
127560499
05022 Pathways of neurodegeneration - multiple diseases
127560499
09165 Substance dependence
05030 Cocaine addiction
127560499
05031 Amphetamine addiction
127560499
05033 Nicotine addiction
127560499
05034 Alcoholism
127560499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127560499
Ion channels [BR:
afz04040
]
Ligand-gated channels
Glutamate (ionotropic)
127560499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
DUF63
Motif
Other DBs
NCBI-GeneID:
127560499
NCBI-ProteinID:
XP_051851116
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All DBs
Position
4:149227764..149257108
Genome browser
AA seq
1323 aa
AA seq
DB search
MCLFLSIPLCVSVSLDVSASFPPCPSISPCLCLSLSLFLYLYRTSPVDMGKVLGLALLLT
TLLGTWAGVGPGRGKQVVTVAVVFASSAPPLQAQAQTLARARLTPQNFLDLPLEIQPITV
VVNNTNPSTLLTQLCGLLGSARVHGIVFEDNVGTEAVAQILDFISSQTHVPIISISGGSA
VVLTPKEPGSSFLQLGVSIEQQIQVIFKVLEEYDWSSFAVITSFHPGYAVFLEGIRSFTE
ASYLGWELQDILTLELSPGSPSSRVQRLLRQLDAQVLVAYCSREEAEYLFAVAEEEGLVG
PGYVWVVPSLALGSTDAPPSVFPVGLISVVTESWRLSLRQKVRDGVAIVALGAHGYLRYH
GDLPAPARDCSAPAEPASPAAEAFYRHLLNVTWEQRDFSFSAGGYLVRPTMVVISLNRHR
LWEMVGRWEQGIIHMKYPVWPRYGAYLQPVVDNRHLTVATLEERPFVIVESPDSSTGGCI
PNTVPCRKQSNHTNRFGSDGSGDSYTKLCCKGFCIDILKKLAKGVKFSYDLYLVTNGKHG
KKVRGIWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSP
SAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKTGGPSFTIGKSVW
LLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS
DKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYRDMHSHMVKFNQRSVEDALTSLKMGKLD
AFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLALLQFLGDG
ETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVFWKLR
HSVPQTPRLDFLLAFSRGIYSCFSGVQSLGSPTRAPSPDLTAGSAQANVLKMLQAAKKMV
NTAGVGSSLDCATRTIESWGSHCEPPPSTFSLRNPQLLLQSGTLSLPGRAARAQNAWPPG
PRGGPRDPGHKGQAGSGDLVVRKVLASAPLPLPDIPPVPGCPGKSSPRRMGPGRGGRLFS
GSGGCHPPECPFPAAPCTHGSLLWADRTGRPFLPLFPEPSEPEDLPLLGPDQLARREALL
RAAWSRGHCLRQGSWPRSMAEYCSAPGPCPPAASMPTLCPSQAAQARGSPARSGADPRGA
WKRLAQAQSLRLPSYREACQEAAPSGPPSVLQRQYYLNACAPLPLYWGPLCPHSPSCAGQ
APWSTETWGPRKHRGRTLGGLGASYRDSGGWGELREAGPTACRTHSPLGPCSWRRVSSLE
SEV
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctctttctttctattcctttatgtgtctctgtctctctggatgtgtctgcttct
tttcctccttgtccctccatctctccctgcctctgtctgtctctgtctctgtttttgtat
ctctacaggacctctccagtggacatgggtaaagtcttgggactggccctcctgctgacc
accctcctaggcacctgggcaggggtggggcctggccgggggaaacaagtggtgacagta
gctgtggtgtttgccagctcagcacccccattgcaggctcaggctcagaccctggcccgg
gcccgcctcaccccccagaacttcctggacctgcccctggagatccagccaatcactgtg
gtggtcaacaacaccaaccccagcacccttctcacccagctctgtgggctcctgggctct
gcccgtgtccatggcatagtctttgaggacaacgtgggcactgaggctgtggcgcagatt
cttgacttcatctcctcccagacccacgtgcccatcatcagcatcagtggaggctcggct
gtggtccttactccaaaggagcctggctcatccttcctgcagctgggggtgtccattgag
cagcagatccaggtgatcttcaaggtcttagaggagtatgactggagctccttcgcggtc
atcaccagcttccacccgggctacgccgtgttcctggagggcatccgctcgttcacggag
gccagctacctgggctgggagctgcaggacatcctgacgctggagctgagccccggcagc
cccagctcccgcgtgcagcgcctgctgcgccagctcgacgcccaggtgctggtggcgtac
tgctctcgggaggaggccgagtacctgttcgccgtggccgaggaggaagggctggtgggg
ccgggctacgtgtgggtggtccccagcctggcgctgggcagcaccgacgcgccgccctcc
gtcttccccgtgggcctcatcagcgtggtgacggagagctggcgcctcagcctgcggcag
aaggtccgggatggggtggccatcgtggccctgggggcccacggctacctgcgctaccac
ggagacctgccggcgcctgctcgggactgctccgccccggccgaacccgccagccctgcc
gcagaagccttctaccggcacctgctgaatgtgacctgggagcagcgagatttctccttc
agtgctggcgggtacttggtgcggcccaccatggtggtgatctcactcaaccggcataga
ctctgggagatggtagggcgctgggagcagggcatcattcacatgaagtaccctgtgtgg
cccaggtatggcgcctacctgcagccagtggtggacaaccggcacctgacggtggccacc
ctggaggagcggccctttgtcatcgtggagagtcctgactctagcacaggtggatgcatt
cccaacactgtgccctgccggaaacagagcaaccataccaacagatttggcagcgatggc
tctggggactcctacaccaaactgtgttgcaagggcttttgcatcgacatcctgaagaag
ctggccaagggggtcaagttctcctatgacctgtacctggtgaccaatggcaaacatggc
aagaaggtgcggggcatctggaacggcatgatcggtgaggtgtactacaagcgggcagac
atggccatcggctccctgaccatcaacgaggagcgctcggagattgttgacttctccgtg
cccttcgtggagacgggcatcagcgtcatggtggcccggagcaatggcaccgtctcgccc
tctgccttcctggagccctacagcccagccgtgtgggtcatgatgtttgtcatgtgtctc
actgtggtggccatcaccgtcttcatgttcgagtacttcagcccagtcagttacaaccag
aacctcaccagcggcaagaagactgggggtccctccttcactattggcaaatctgtctgg
ctgctgtgggctttggtcttcaacaattccgtgcccattgagaacccccggggtactacc
agcaagatcatggtgcttgtctgggccttctttgccgtcatcttcctggccagctacacg
gccaacctggctgcctttatgattcaggagcagtacattgacaccgtgtccggcctcagt
gacaagaagtttcagcggccccaggagcagtaccctccgttccgctttggcacggtgccc
aatggcagcacagagcgaaacatcaggagcaactaccgggacatgcacagccacatggtc
aagtttaaccagcgctcagtggaggatgcactcaccagcctcaagatggggaagctggac
gcctttatctacgatgctgctgttctcaactatatggcgggcaaggatgagggctgcaag
ctggtgaccattgggtcgggcaaggtctttgccaccacgggctacggcatcgctttgcag
aaggactcccgctggaaacgggccattgatctggcgctcctgcagttcctgggggacggg
gagacccaaaagctggaaacagtgtggctgtcggggatctgccagaacgagaagaatgag
gtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctacatgctcctggtg
gccatggggctggccctgcttgtctttgcctgggagcacctggtcttttggaagctccgg
cattctgtgccccagaccccgaggctggatttcctgctggcctttagcagggggatctac
agctgcttcagcggggtacagagcctcggtagccccacaagggcgcccagcccagacttg
acagccggctccgctcaggccaatgtgttgaagatgctccaagcggcaaagaaaatggtg
aatacagcgggcgtggggagttccctggactgtgccacccgtaccatcgagagctggggc
agccactgcgagcctccaccctccaccttttctcttcgaaaccctcaactgctgctgcaa
agcgggacgctgagcctgccgggcagggccgcccgagcccagaacgcgtggcccccgggc
ccccggggagggccccgagaccctggccacaaaggccaggctggctcgggggacctggtg
gttcggaaggtcctcgcttcagcccccttgcccctgcccgacatcccccccgtgcctggg
tgtcccggcaagagctccccccgacggatgggaccaggacgcggaggcaggctgttctca
ggctcaggtgggtgccaccctcctgagtgcccattcccggctgctccctgcacccacgga
tccttgctctgggcagaccggacgggccgccccttcctcccgcttttcccagagccctct
gaacccgaggacctgcctctgctggggcccgaccagctggctcgacgggaggctctcctg
cgcgcggcctggtcccgcgggcactgcctgcgccagggctcttggccaaggtcgatggcc
gagtactgctccgcgcccggcccgtgccctccggcagcctcgatgcccaccctgtgccct
tcccaggctgctcaggcgagagggagccctgcgcgctctggtgcggacccccggggggcc
tggaagcgcttggcccaggcccagtcccttcggctgccctcctacagggaggcgtgccag
gaagcagcgccttctgggccccccagtgtgctgcagagacagtactatctcaacgcctgc
gcccctctgccgctctactgggggcctttgtgtccacattccccgtcctgtgccggccag
gccccctggagcactgagacctggggacctcgaaagcacaggggcaggactttggggggg
ctgggcgccagctacagggatagcggggggtggggggagctgagggaggccgggcccaca
gcctgcaggacacacagtcccctggggccctgcagctggaggcgagtctccagcctagaa
tcagaggtgtga
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