Antechinus flavipes (yellow-footed antechinus): 127560564
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Entry
127560564 CDS
T08818
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04136
Autophagy - other
afz04140
Autophagy - animal
afz05010
Alzheimer disease
afz05014
Amyotrophic lateral sclerosis
afz05016
Huntington disease
afz05017
Spinocerebellar ataxia
afz05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127560564
04136 Autophagy - other
127560564
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127560564
05014 Amyotrophic lateral sclerosis
127560564
05016 Huntington disease
127560564
05017 Spinocerebellar ataxia
127560564
05022 Pathways of neurodegeneration - multiple diseases
127560564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127560564
03029 Mitochondrial biogenesis [BR:
afz03029
]
127560564
Membrane trafficking [BR:
afz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127560564
Mitochondrial biogenesis [BR:
afz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127560564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
BCAS3_WD40
DUF5711
Beta-prop_IFT140_1st
Beta-prop_Vps41
EIF3I
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
127560564
NCBI-ProteinID:
XP_051851208
LinkDB
All DBs
Position
4:158064854..158113545
Genome browser
AA seq
458 aa
AA seq
DB search
MLSPSPPPAMEAEVAEAPPGGVEAEAGLSCFSFNQDRTSLAIGTKTGYRLFSLSSVEQLD
QVHESSEIPDVYIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLN
RQRLLVCLEESIYIHNIKDMKLLKTILDIPVNPTGLCALSINHSNSYLAYPGSLTTGEIV
LYDGNTLKTVCTIPAHEGPLAAITFNSVGSKLASASEKGTVIRVFSVPEGQKLYEFRRGM
KRYVNINSLVFSMDSQFLCASSNTETVHIFKLDNPTSSGPEEPSTWTGYMGKMFMAATNY
LPSQVSDMMNQDRAFATVRLNFSGQKNICTLSTIQKLPRLLVISSDGRLYIYNLDPQDGG
ECILIKTHSLLGSGKTEENKENDLRPSLPQSYAATVARPGTTSLSSTVPGYSEDGGALRG
EVIPEHEFATGPVCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcccctctcctccgcccgccatggaggcagaggtggccgaagcccccccgggt
ggggtggaggccgaagccgggcttagctgcttctccttcaaccaggaccgcacatcccta
gcaattggaaccaaaactgggtataggttattttccctgagttctgtggaacaactggac
caagtccatgaaagcagtgaaataccagatgtctacattgtagagcggctcttctctagt
agcttggttgtggtggttagtcatacaaaaccacggcagatgaatgtgtatcatttcaaa
aagggtacagaaatttgtaactacagctattctagcaacatcctgtctataaggctgaac
cgacagaggctgctggtgtgcctggaggaatccatttatattcacaacattaaagatatg
aaattattgaagactatcctggatatacctgtaaacccaacaggtttgtgtgccctatct
attaaccattccaattcttaccttgcttaccctggaagcttaactactggagaaattgta
ctttatgatggaaatactctgaaaacagtctgcacaattcctgcccatgaaggtccactt
gcagccatcaccttcaactctgtgggatctaagctagccagtgcttctgagaaaggcaca
gtcatccgggtgttttctgttcctgaaggacaaaaactctatgagtttaggagaggaatg
aagaggtatgtgaatatcaactccttagttttcagtatggattcacagttcctctgtgca
tccagcaacacagaaacagtgcacatcttcaaactagacaaccctacctccagtgggcca
gaagagccctcaacctggactggttacatgggaaagatgttcatggctgctaccaactac
ctcccttcccaagtatcagatatgatgaaccaggacagagcctttgccactgtgcgtttg
aatttctctggtcagaagaacatctgcactctctctactattcagaagttgccaaggcta
ttagtgatatcatctgatggaagactttatatctataatttggaccctcaggatggagga
gaatgtatcttaatcaagacccacagcttacttggctcaggaaagacagaagaaaataag
gaaaatgacctcagaccttcattacctcagtcttacgcagcaacagtagccagaccaggc
accacgtctttgtcctcaacagtgccaggttattccgaggatggtggagcacttcgagga
gaggttatcccagaacatgagtttgcaacgggaccagtgtgtcttgatgatgagaatgag
tttcctcctataatcttgtgccgtggaagtcagaagggcaaaacgaagcagtcatga
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