Antechinus flavipes (yellow-footed antechinus): 127560587
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Entry
127560587 CDS
T08818
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
afz05202
Transcriptional misregulation in cancer
afz05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127560587
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127560587
05205 Proteoglycans in cancer
127560587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127560587
03009 Ribosome biogenesis [BR:
afz03009
]
127560587
Enzymes [BR:
afz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127560587
Spliceosome [BR:
afz03041
]
Complex A
U1 snRNP components
U1 related factors
127560587
Complex B
127560587
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
Pre-60S particles
Helicases
127560587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
127560587
NCBI-ProteinID:
XP_051851246
LinkDB
All DBs
Position
4:162106002..162113621
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AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLIKKKWNLEELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPILNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLIEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAASY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGNNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatactcgagtgacagagaccgcggccgggatcgagggtttggggcccctagg
tttggaggaagtagaggaggacctctatctggaaagaaatttggaaaccctggggagaaa
ctcattaaaaagaaatggaatctcgaggaactgcccaaatttgagaagaatttttatcag
gaacatcctgatttggctaggcgcacagcacaagaagttgatacatatagaagaagcaaa
gaaattacagtacgaggtcacaactgcccaaaaccaattctaaatttctatgaagcaaat
tttcctgcaaatgtcatggatgtaattgcaaggcagaattttactgaacctactgctatc
caagcccaaggatggcctgttgctctaagtggtttggatatggttggagtagcacagact
ggatcagggaaaacactgtcatatttgctgcctgccattgtccacataaatcatcagcca
ttcctagagagaggtgatgggcctatttgtttggtgctggcgccaactcgtgaactggcc
caacaggtacaacaagtagctgctgaatacagtagagcatgtcgtctaaaatccacttgc
atctatggtggtgctccaaagggaccacaaataagggacttagaaagaggtgtagaaatt
tgcattgcaacacctggaagactgatagactttttagagtgtggaaaaactaatttgaga
agaactacttatcttgtgcttgatgaagcagacagaatgcttgatatgggctttgagcct
caaatccggaagattgttgatcagataagacctgacagacaaaccctaatgtggagtgca
acttggccaaaagaagtgaggcaacttgctgaagactttttgaaagattacattcacatc
aacattggtgctctggaactgagtgcaaatcacaatattcttcagattgtggatgtttgt
catgatgtagaaaaggatgagaaacttattcgattgatggaggagatcatgagcgaaaag
gaaaataaaactattgtttttgtggaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgcaatgggtatccatggtgacaagagtcaacaggagcga
gactgggttctaaatgaattcaaacatggaaaagctcctatcctgattgccacagatgtt
gcatctagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcttcagaggattatatccaccgaattggacgaactgcccgtagtaccaaaacaggcaca
gcttatactttctttacacctaataacataaaacaagtaagcgacctcatctctgtgctt
cgggaagctaatcaagcaatcaatcccaaattgcttcagttaattgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgacgtgacagatactctgcgggc
aaaaggggtggatttaatacctttagggacagggaaaattatgacagaggctattctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtctacagtgctgcaagttac
accaatgggagctttggaagtaattttgtgtctgctggtatacagactagttttaggact
ggtaatccaacagggacttaccagaatggttatgacagtacacagcaatatggaaataat
gtcccaaatatgcacaatggcatgaaccaacaggcatatgcatatcctgctactgcagct
gcacctatgataggttatccaatgccaacaggatattctcaataa
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