Antechinus flavipes (yellow-footed antechinus): 127561044
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Entry
127561044 CDS
T08818
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03022
Basal transcription factors
afz03420
Nucleotide excision repair
afz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127561044
09124 Replication and repair
03420 Nucleotide excision repair
127561044
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127561044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127561044
03400 DNA repair and recombination proteins [BR:
afz03400
]
127561044
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127561044
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127561044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
127561044
NCBI-ProteinID:
XP_051852127
LinkDB
All DBs
Position
4:189493496..189501740
Genome browser
AA seq
464 aa
AA seq
DB search
MMEGSLPRTGLSRGQLQCRNLQEFLRGLSPVVLDRLYGHPATCLAVFRELPSLAKNWVMR
MLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGFILNPVFRQNL
RVALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQL
LSQAGLMKSSEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLF
QLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVTGAG
GTAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIANG
ITAQQIIHFMKTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDF
ELLLSHARELGVLVFENTAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggggtctctacctcggactggactgagccggggacaactacagtgccgtaac
ctgcaggagtttttgaggggtttgagtcctgtagtactagaccgactttatggtcaccca
gccacctgcctagctgtctttagggaactcccatccttggccaaaaactgggtgatgcgg
atgttgtttctagagcagccattaccccaagcagctgtagccctgtgggtcaagaaggaa
tttagcaaagcccaggaggaaagcacaggactgttgagtggtctccgtatctggcacacc
cagttactccctggtggccttcagggcttcattctcaatcctgttttccgacagaatctt
cgtgttgctctcctgggaggggggaaggcttggtcagatgatacaagtcagcttggtcca
gacaaacatgctcgagatgttccatcattggacaagtatgcagaagaaagatgggaggtg
atcctgcatttcatggttggctccccaagtgcagccgtcagccaggacctggcccagcta
ctcagccaggctggactcatgaagagttctgagcctggagagccaccctgcattacatct
gctggcttccagttcttattgctagacacacctgcccagctttggtattttatgcttcag
tatttgcagactgcccagagccgaggcatggatctggttgagatcctatccttcctcttc
cagcttagcttctctactcttggcaaggattattctgtggagggcatgagtgattccctt
cttaattttttgcaacatctacgagagtttgggctggtattccaaaggaagagaaagtct
cggcgctactatccaacccgactggccatcaacttgtcatcaggtgttactggtgctgga
ggtacagctcatcaaccaggcttcattgttgtggaaaccaactaccgcctctatgcctat
actgagtcagaacttcagattgcactcattgccctcttctctgagatgctctatcgattc
cccaatatggtagtagcccaggtcactcgagagagtgtgcagcaggccattgctaatggt
atcacagcccagcagatcatccacttcatgaagacaagagcacatccagtgatgctgaaa
cagacccctgtactgcctcccaccattacagatcagatccgactctgggagttggagaga
gaccggcttcgattctcagagggtgtcctctacaaccagttcctgtcccaggtggatttt
gagctactgctttcgcatgcccgggagcttggggtgctggtctttgagaacacagccaaa
cggcttatggtggtgactccggcggggcacagtgacgtcaagcggttttggaagagacag
aagcacagctcctga
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