Antechinus flavipes (yellow-footed antechinus): 127562086
Help
Entry
127562086 CDS
T08818
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127562086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afz03041
]
127562086
Spliceosome [BR:
afz03041
]
Complex C
Other components
Step II factors
127562086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
127562086
NCBI-ProteinID:
XP_051853494
LinkDB
All DBs
Position
4:287834394..287897068
Genome browser
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDNESGRCSLPAADSLIHLTKAPSAKLSLVGTVDAAPEV
AVKEDVETGVHLDPAIKEVQYNPSYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPTHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKHEDDKPGEEKTI
LHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFVGHSKAVRDICFNGVGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgccatcgccgctctggcagcgtcctacgggtcgggctcgggatccgagtcc
gactccgacaacgagagtggccgctgttccttgccagcagccgactcccttatccatctg
acgaaggcgccttcggccaagctctctctagtggggactgtggacgcggcgccggaggtg
gcggttaaggaagatgtggagactggagtacaccttgaccctgccattaaggaagtccaa
tacaatccttcctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
actcagcagatggctgcccctaggaatatgctttctggatatgcagaaccaactcatatc
aacgatttcatgtttgaacagcagagacgcacttttgcaacctatggctatgcattggat
ccttcattagataatcatcaagtttctactaaatatattggctctgtagaagaagctgaa
aaaaatcaaggtttaactgtatttgaaactggacagaaaaaaacagaaaagagaaaaaag
ttcaaagaaaatgatgcatcaaatattgatggtttcttaggaccttgggcaaaatacgta
gatgaaaaagaagtggctaaaccttctgaagaagaacagaaagagttagatgaaatcaca
gcaaagaggcaaaagaaaggcaaacatgaagacgacaaacctggggaagaaaagaccatt
ttacatgtcaaagaaatgtatgactatcaaggcaggtcttatcttcatgttcctcaagat
gtcggtgttaatctccgttctacagtaccacctgagaaatgttatcttcccaaaaaacaa
attcatgtttggtctggacacacaaagggcgtcagtgccgtcaggctatttcctctttct
ggccatttgttactgtcttgttccatggactgcaaaattaagctatgggaagtttatgga
gatcggcgctgtttaagaacatttgttggtcacagtaaagctgttagagatatctgtttt
aatggtgtaggaactcagttcctcagtgcagcatatgacaggtatctcaagctatgggac
actgaaacaggtcagtgtatatcaagatttacaaaccggaaagttccttattgtgtcaag
ttcaatcctgatgaagataaacaaaatctttttgtggctggcatgtcagataagaagatt
gtacaatgggacatcagaagtggggagattgtacaagaatatgataggcatttgggagct
gtcaataccattgtgtttgtggatgagaataggcggtttgtgagcacttctgacgacaag
agcttacgtgtttgggaatgggacattcctgtagactttaaatatatagcagaacccagt
atgcattcaatgcctgcagtgactttatctccaaatgggaagtggctagcatgtcagtcc
atggacaatcaaattttaattttcggagcacagaaccgatttagattgaataagaaaaaa
atatttaaagggcacatggtggcaggatatgcttgtcaggtggacttttccccagatatg
agctacgtgatatcaggagatggaaatggaaaattaaatatttgggactggaagactaca
aaactctacagtcgatttaaagctcatgataaagtatgcataggtgctgtgtggcaccca
catgaaacatctaaagttatcacttgtggctgggatggtcttattaaattatgggattaa
DBGET
integrated database retrieval system
