KEGG   Antechinus flavipes (yellow-footed antechinus): 127562109
Entry
127562109         CDS       T08818                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03082  ATP-dependent chromatin remodeling
afz03083  Polycomb repressive complex
afz04110  Cell cycle
afz04213  Longevity regulating pathway - multiple species
afz04330  Notch signaling pathway
afz04350  TGF-beta signaling pathway
afz04613  Neutrophil extracellular trap formation
afz04919  Thyroid hormone signaling pathway
afz05016  Huntington disease
afz05031  Amphetamine addiction
afz05034  Alcoholism
afz05165  Human papillomavirus infection
afz05169  Epstein-Barr virus infection
afz05200  Pathways in cancer
afz05202  Transcriptional misregulation in cancer
afz05203  Viral carcinogenesis
afz05206  MicroRNAs in cancer
afz05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:afz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127562109
   03083 Polycomb repressive complex
    127562109
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    127562109
   04350 TGF-beta signaling pathway
    127562109
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127562109
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    127562109
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    127562109
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    127562109
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127562109
   05202 Transcriptional misregulation in cancer
    127562109
   05206 MicroRNAs in cancer
    127562109
   05203 Viral carcinogenesis
    127562109
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    127562109
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    127562109
   05165 Human papillomavirus infection
    127562109
  09164 Neurodegenerative disease
   05016 Huntington disease
    127562109
  09165 Substance dependence
   05031 Amphetamine addiction
    127562109
   05034 Alcoholism
    127562109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afz03036]
    127562109
Enzymes [BR:afz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127562109
Chromosome and associated proteins [BR:afz03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127562109
   HDAC complexes
    Sin3A-HDAC complex
     127562109
    BRAF-HDAC complex
     127562109
    REST complex
     127562109
    SHIP complex
     127562109
    MiDAC complex
     127562109
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127562109
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127562109
  Chromatin remodeling factors
   NuRD complex
    127562109
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127562109
NCBI-ProteinID: XP_051853531
LinkDB
Position
4
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEEKSKDNSGEKTDTKGT
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactactatgatggtgatatt
ggaaattattattatggacagggtcatcctatgaaacctcataggatccgcatgacccat
aacctgctgttaaattatggcttgtataggaaaatggaaatttataggccccacaaagct
acagctgaagaaatgaccaagtatcacagcgatgaatacataaaatttctgcgctcaata
aggccagataatatgtctgagtatagcaagcagatgcaaagatttaacgttggagaagat
tgtcctgtgtttgatgggctttttgagttttgccaactatcaactggtggctctgttgct
ggggcagtaaaattaaacagacaacagactgacatggctgttaactgggctggaggtctt
catcatgcaaagaaatcagaagcatcaggtttctgctatgttaatgatattgtccttgcc
atcctagaattgctaaagtaccatcagagagtcctgtacattgatattgatatccatcat
ggtgatggtgttgaggaagcattttatacaacagaccgtgtaatgactgtatcattccac
aaatatggtgaatactttcctggtacaggagacttgagggacattggtgcaggaaaaggc
aagtactatgctgtcaactttccaatgagagatggtatagatgatgagtcctatgggcag
atatttaaaccaataatatcaaaagtgatggagatgtatcagcctagtgcagtagtgttg
cagtgtggtgcagattcattatctggtgatagacttggatgtttcaatcttactgtcaaa
ggtcatgctaaatgtgtagaagttgtaaaaactttcaatttgccccttttgatgcttgga
ggaggtggatacacaatccgtaatgttgcccgttgttggacatatgaaactgctgttgcc
ttagattgtgaaattccaaatgagttgccatacaacgattactttgagtattttggacca
gattttaaattgcacattagtccatcaaatatgacaaatcagaatactccagagtacatg
gagaaaattaaacaacgtttatttgaaaacttgcgcatgttacctcatgcgcctggtgta
cagatgcaagccatccctgaagatgctgttcatgaagacagtggggatgaagatggagaa
gatccagacaaacgaatttctattcgagcatctgacaaacggatagcttgtgatgaagaa
ttttcagattctgaggatgaaggggaaggagggcgtagaaatgtggctgatcataagaaa
ggagcaaagaaagcaagaatagaagaagataaaaaggaaacagaggacaagaaagcagat
gttaaagaagaggagaagtccaaggacaacagtggtgaaaagacagacaccaaaggaacc
aaatcggaacagctcagcaatccttga

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