Antechinus flavipes (yellow-footed antechinus): 127562240
Help
Entry
127562240 CDS
T08818
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
afz05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127562240
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
127562240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127562240
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127562240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
127562240
NCBI-ProteinID:
XP_051853761
LinkDB
All DBs
Position
4:complement(319596877..319735655)
Genome browser
AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRHDKPSSFVEPVEEYDY
EDTKEPANSISNHQLSGIDQARLYSCLDHMREVLGDDVPDQTMIEAVLQSKFDVEKALAM
VLEQNKKQTKSEEAISMGKATKGKSVDHQSSRSESEIVPKVTKMTVSGKKQTMGFEIPGV
TAEENGDSVHTPHKGPPSEDASIVSSGILETVSKSTLPSHTIQALEEQSTTPTPVKKSNK
LKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
ITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITKSQSSELTKWYKGQCLLEQIDSFKPP
QRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFKARILIFNIEIPITKGFPV
LLHYQTVSEPATIRRLISILHKSTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKDFK
ELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcaagacatgataaaccatcatcatttgttgagccagtagaagaatatgactat
gaagatacaaaagaacctgctaactctatttctaatcatcagcttagtggaattgatcaa
gctcgtctttactcatgccttgatcacatgagagaggtgcttggagatgatgtcccagat
caaacaatgattgaagcagtgttgcaaagtaaatttgatgtggagaaggctttagctatg
gtgcttgagcaaaataaaaagcagaccaagagtgaggaagctatctccatgggaaaggca
acaaaaggaaaatcagtagatcatcagtcatctcgaagtgaatctgaaattgtgccaaaa
gttacgaaaatgaccgtatctggaaagaagcagactatgggatttgaaattcctggagtg
actgctgaagaaaatggagatagtgttcacacacctcataaaggacctcctagtgaagat
gccagcattgtttcttctggtattcttgagacagtttctaaatcaactcttccatcccac
accattcaggcattagaagaacagagcacaacaccaacaccagtgaaaaagtctaacaag
ctgaagcaacaaatagatgtgaaggctgaactggaaaagaggcaagggggaaagcaacta
ctcaacttggtggtaattggtcatgtggatgccggaaaaagtactctgatgggtcatctc
ctttaccttctgggcaatgtaaataaaagaactatgcacaaatacgaacaagaatctaaa
aaggctggtaaagcctcatttgcttatgcttgggtcttggatgaaacaggagaagaaaga
gaaaggggtgttacaatggatgtgggtatgacaaagtttgaaacgaagaccaaagttatt
acattaatggatgctccaggacataaagacttcattccaaatatgattactggagctgcc
caggctgatgttgctgttttagtggtagatgccagtaggggggaatttgaagctgggttt
gaaactggaggacagacacgagaacatggactcttggttcgttctcttggagtaacccag
ctggcagttgcagttaataaaatggatcaggttaattggcagcaagaaagatttcaagag
attactggcaaacttggacacttcctgaaacaggctggttttaaggagagtgatgtggcc
ttcatccctacaagtggtcttagtggagaaaatctaattacaaaatctcaatcaagtgaa
ctaacaaaatggtataaaggacaatgtttgttagaacaaattgattctttcaagcctcca
caaagatctattgaaaagccttttagattatgtgtatctgatgtttttaaagatcaagga
tctggattttgtgtgactggcaaaattgaagctggttatatccagactggtgaccgactt
ctagcaatgcctcctaatgaaacttgcactgcaaaaggaatcatgctacatgatgaaccc
gttgattgggcagcagcaggagatcatgttagtctcaccttggttggtatggatatcatc
aaaatcaatgttggttgtattttctgtggtcccaaagaacccattaaagcctgtactcgt
ttcaaagctcgaatcctcatctttaatattgaaattcccatcactaaaggattccctgta
ctgttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagcatcctg
cacaaaagcactggtgaagtcacaaagaaaaaacccaagttgttgactaaaggccagaat
gctttagtagaactacagacacaaagacctattgctcttgaattatataaggactttaaa
gaactgggcagattcatgttgcgttacagtggttctactatagctgcgggtgttgtcact
gagattaaagaatga
DBGET
integrated database retrieval system
