Antechinus flavipes (yellow-footed antechinus): 127562350
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Entry
127562350 CDS
T08818
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127562350
03041 Spliceosome [BR:
afz03041
]
127562350
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127562350
Spliceosome [BR:
afz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127562350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
Motif
Other DBs
NCBI-GeneID:
127562350
NCBI-ProteinID:
XP_051853942
LinkDB
All DBs
Position
4:344209500..344475396
Genome browser
AA seq
1272 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTAASMSNNTPGTPVTPVTPANVVQGLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSDRGEEPKKETSSSQLSHVSESVNNSI
FHQLAEQLQQQNLEHLRQQLLEQQQPQKVTVTQENPESTFGSEHSASPSQGSSQQQFLEP
ETNLDDSIDIQQQDMELDEGQDVAEEIFEQEEKKVPIRSRSRTHSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSYRALQKLSSGSYKI
GSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNSEW
ETVKTSEPVKEPVQTVESPTTVEKTPVVTTQAEVYPPPVAMLPIPVAPAVPTVSLVPPTF
PVSMSVPPPGFSAIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVATSLVQPP
ISMTPETMKDVAFSNLVLPVGSVSSSLATSTMSAGSVYNPPSNQPEAEEKLSHLTDHQLS
SSESTRPVIHNDVSSSSGILGGQPPNMSSNSGILGGQPPNVSSNSGILGVQPSNVSSNSG
MIGAQPPNIPSSSGILRPQLPNVSGSSGLLGVPPPNIPSNSGLLGVQPPNVPSNSGILGP
QPPTGPQNLPPLNIPGQRMPGIPMLDIRPGLIPQSPGPRFPLLQPGLPPQRGIPPPAILD
ASLHPPPRGPFAPGDIFSQSERPFPAPLRQNIDHIPNPEKRLPLGNDSIQQEGDRDYRFP
PIENRETINRPSPVDVRDVVGRPVDPREGPGRPPIDGREHFGRPHIDIRENLVRPGIDNL
GRRDHFGFNSDKPWGHRDFDEREHRVLPLYGGPKSFHEDRGRFRHGNFRFDPRSGPIWNR
GFGQDAHRDFDDRRRPWERQRDRDERDFDFCREINGNRFGRDRIQNTWVPHPHPRVFDYF
EGATSQRKADNVPQVNGENTETDNQPPPLQVQNDPELYEKLTSSSEINKEKNDTEADIES
EPVVESTETEGT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaacagcgaactctattccctgaatgactacaaaccacct
atttccaaggctaaaatgacacagattactaaggcagccatcaaagctattaagttctat
aaacacgtggtacagagtgttgagaaattcattcaaaagtgtaaaccagaatataaggtg
cctggactttatgttattgattccattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtttttgcacccagatttagtaataacatcattagcacttttcagaatttgtat
cgttgccctggtgacgacaagagtaaaatagtcagggttctaaacttatggcagaagaat
aatgtatttaagagtgaaattattcagcctcttcttgatatggcagcaggaattccacca
ccagttgtcacgcctgttttgccaagtacagcagcatctatgagcaacaataccccagga
actccggtgacacctgttactccagccaatgtggtacaaggtttgcctgacccttgggta
tctcagatagccaatacagatacactagctgctgtggcacagattttgcaaagtcctcaa
ggccagcagctacaacaattaatacagacactacagattcaacagcagaaaccacagcct
tcactacttcaagcactggatgctggtcttgttgttcagttgcaagcattgacagcacaa
ctcacagctgcagctgcagcagccaatactcttaatccgctagaacaaggagtctctttt
aataagaagttgatggatagatttgattttggagaagattctgaccgcggtgaagaacct
aaaaaggaaacttcatcttcccaactctctcatgtttcagaatctgtaaacaactcaatt
tttcatcagttagcagaacaactgcaacaacaaaatcttgagcatcttcgacaacagctc
ctagaacagcagcaacctcaaaaggtaactgttactcaagagaatccagaaagtacattt
ggttcagagcactctgcatcaccatcacagggaagtagccaacagcagttccttgaacct
gagacaaacttggatgattctatagatattcagcaacaggatatggagttagatgaaggg
caagatgttgctgaagagatctttgagcaagaagaaaagaaagtgcctattcgctctaga
tcaagaacacattcaagatctcggtcaagatcaccaagaaaacgaaggtccaggtcacgc
tctggttctcgaaagcgcaaacacagaaagcgatcacgctcacggtcaagagaaaggaaa
agaaaatcttctcgttcctactctagcgaaagaagagctagggaaagggagaaagaaaga
cagaaaaaaggattgcctccaatccgatctaaaacattaagtgtctgtagtactactctc
tgggttggtcaagtagataagaaagctacacagcaagatttaaccaatctttttgaagaa
tttggacagattgaatccattaatatgattcctccacgaggctgtgcctatgtttgtatg
gttcatagacaagattcttatcgggcacttcagaaacttagttccggatcttacaaaatt
ggatccaaagttataaagattgcttgggctttaaataaaggtgtaaaaacagagtataaa
caattttgggatgtagatcttggagttacttatataccgtgggagaaagtaaaggtggat
gacctagatggctttgctgaaggagggatgattgatcaggagactgtgaatagtgaatgg
gaaactgtgaagacttctgagcctgtcaaagaacctgtccaaactgtagagagtccgaca
acagttgaaaagacaccagtggttactacacaggctgaagtttatcctccacctgttgct
atgttgccgattccagtagcaccagctgtacctactgttagtttagttccaccaacattt
ccagtgtcaatgtccgttcctcctccaggatttagtgcaattcctccacctcccttctta
agagcaagtttcaacccatcacaaccacctcctggtttcatgccacccccggttccacca
cctgttgtgccaccccctgctattcctccagtagtagcaacatctctagtacagcctcca
atatctatgactccagagacaatgaaagatgttgcttttagtaaccttgttttgccagtt
ggctctgtgtctagcagtcttgctacttcaactatgtcagctggaagtgtttataatcca
ccaagtaaccagcctgaggcagaagaaaaattatcacacctcacagaccaccagctttct
tccagtgaaagtaccagaccagtgatccacaatgatgtctcaagtagctctggaattcta
ggtggacagccaccaaacatgtcaagcaattctgggattttgggtggacagccaccaaat
gtatcaagcaattctggaattctgggagtacagccatctaatgtttccagtaattctgga
atgattggagcacagccaccaaatattccaagtagttccggaattctgagaccacaatta
cccaatgtgtcaggtagctctggactcttgggggtaccacccccaaatattcctagcaat
tctggactcctgggagttcagccaccaaatgttccaagtaattctggaattctgggacca
cagccaccaactgggcctcaaaacttgcccccattaaatattcctggtcagcggatgcct
ggaataccaatgttagatattcgtccaggacttataccacaatctcctgggccaagattc
cctttattgcagcctggacttccaccacaaagaggaattccacctcctgcaattcttgat
gcatctcttcatcctccacctcgtggtccttttgctccaggagatattttcagtcagtca
gaaagaccttttccagctcctttaagacaaaatatagatcatatacctaatccagaaaaa
aggctaccacttgggaatgatagtattcaacaggaaggagatagagattatcgctttcct
cctatagaaaacagggagaccattaataggccttcaccagtggatgttagggacgtagtg
gggcgacctgtagatccaagagaaggtccaggaagacctccaatagatggaagggaacac
tttggaagaccacatatagatataagagaaaatcttgtaagaccaggtatagataacctt
ggtcgaagagaccactttggttttaattcagataagccttggggccatagagattttgat
gaaagagagcatcgtgttttacctctctatggtggtcctaaaagcttccatgaagacaga
ggtagatttagacacggaaattttaggtttgatcctagaagtggtcctatttggaacaga
ggatttggacaggatgctcacagagattttgatgaccgcagaagaccctgggagagacaa
agggatagagatgaaagagattttgatttctgccgagaaattaatggaaatcgttttgga
agagacagaattcagaacacctgggtcccacatccacacccccgagtttttgattatttt
gaaggggccacttctcaacgaaaagctgataatgtaccccaggtaaatggtgaaaataca
gagacagataatcaaccaccacctttacaagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaagtgaaataaacaaagagaagaatgacacagaagctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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