Antechinus flavipes (yellow-footed antechinus): 127562421
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Entry
127562421 CDS
T08818
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04014
Ras signaling pathway
afz04015
Rap1 signaling pathway
afz04024
cAMP signaling pathway
afz04517
IgSF CAM signaling
afz04520
Adherens junction
afz04530
Tight junction
afz04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
127562421
04015 Rap1 signaling pathway
127562421
04024 cAMP signaling pathway
127562421
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127562421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127562421
04530 Tight junction
127562421
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
127562421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
RA_3
RA_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
127562421
NCBI-ProteinID:
XP_051854072
LinkDB
All DBs
Position
4:359706716..359868591
Genome browser
AA seq
1930 aa
AA seq
DB search
MSSAGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKC
IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWN
KDDREGRFVLKNENDAIPPKKTQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALR
QASDKDDRPLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFR
SSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVVEALEKYGLEKENPKDYCVA
RVMLPPGGQHSDEKGAKEVILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKLKKQ
IDGKPLKGKERAEGSGYGSSLPPEKLPYLVELSPGRRNHFAYYSYHTYEDGSDSRDKPKL
YRLQLSITEVGTEKFDENSIQLFGPGIQPHHCDLTNMDGVVTVTPRNIDAETYVEGQRIS
ETTMLQSGMKVQFGTSHVFKFVGPSQDHIIAKRAMDGGLMVKGPRHKPGIVQETTFDLEG
DIHSGTAIPTSKSTTRLDSDRISSTSSTAERGMVKPMIRVEQQQDYRRQDSRTQDAPGPE
LILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSNQYRPEISPTE
RTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TLDAQDILAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSPEDIPNINSTCFKLNSLQLQALLQNYHCAPDE
PFIPSDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPNG
LQEFLDPLCQRGFCRLLPHPRSPGTWTIYFEGADYESHFMRENTELTQPLRKEPEIITVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSAQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNTYAT
GTSAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMVPVQNQWTN
YDEKQQIQTDNNHSSVIIQRVTRSQEELRDDQVYQTECHRKDADYLDRKSDSDMWINQSS
SMESSTSSQEFLNHSSKSITPASTLTKSGPGRWKTPTALQPTPVAISQPIRTDLPPPPPP
PPVHYATDFDGVPLDLPLPPPPPLHQVGSQATPAAAAERKKREEHQRWYEKEKARLEEER
ERKRREQERKLGQMRTQPLTPSQVTPGPVQQIKPEKPSTLQRPQETVIRELQPQQQPRTI
ERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQDLQNKPDRT
AEENDRLRKLMLEWQFQKRLQESKQKDEDDEDEEDDDVDTMLIMQRLEAERRTRVKGKNP
LGQTAMPAISVLDLLQDEERRRQQQLEEIRKREAEDRARQEEDRRRQEEERAKRDAEEKR
RQEEGYYNRLEAERRRQHDEAERRLLEPDEPGLYRPPLPRDYELPPPPPSSNAPPPPPQR
NTSYLKTQVLSPDTVYTAKFVAYNEEEEEEEDSSLAGQDKYSCTRKSYGDFPPAALKPQQ
PCCQPRPVSDGIYLSNSFQPPSVNANSTAYKTGQPPPPPKKPSFYHPSNSKGPNSYTGST
GAVVGVHEVYRDPREKRSKSQDADLPGVSGAPENLTFKERQRLFSQGQDVSNKVKASRKL
TELENELNTK
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggccggcagccgggaagaggagcggcggaaactggcggatatcatcaaccac
tggaacgcgaaccggctggacctgttcgaaatcagccagcccaccgaggatctggaattc
catggggtaatgagattttactttcaagataaagctgctggaaactttgcaacaaaatgc
attcgagtctctagcactgctacaactcaagatgtcatagaaactcttgcagagaaattt
cgacctgacatgagaatgctatcatctcctaaatattcactctatgaagtgcatgtcagt
ggagaagaaagaagattggatatagatgagaagcctctagttgtacaattaaattggaac
aaagatgatcgggagggcagatttgtgctcaagaatgaaaatgatgcaattcctcctaag
aagactcaaagtaatgggcctgagaaacaagaaaaagaaggtgtgatccagaactttaaa
agaactctttcaaagaaagaaaaaaaagaaaaaaagaagagggagaaagaggctttgcga
caagcatctgataaagatgataggcctttgcatggagatgacattgagaattcccgcttg
gcagctgaggtgtataaagatatgcctgaaactagttttactcgcacaatatcaaatcct
gaggtagttatgaaacggcggagacagcagaaactggaaaaaagaatgcaagagttcaga
agctcagatggccggcctgattcaggtggaacactgaggatttatgcagatagtttgaaa
ccaaacatcccatacaagacaatcttgctgtcaaccacagatacggcagattttgctgtg
gttgaagctttagagaaatacggtttggaaaaagaaaaccctaaggactactgtgttgcc
cgtgttatgcttcctcctggaggccaacattcagatgaaaaaggtgctaaagaagtgatt
ttggatgatgatgaatgccccctacagatcttcagggaatggccaagtgacaaaggaatt
ttagtttttcagttgaaaaggaggccacctgattatgtcccaaagaaactgaagaagcaa
atcgacggaaaaccactaaaggggaaggaaagagctgaagggtctggctatggttcttca
ctcccacctgaaaaactgccgtatttagtagaattaagtccaggcagaaggaatcacttt
gcctactacagctatcacacttatgaagatggttctgattccagagataaaccaaaactt
taccgtctacaattaagtatcactgaagttggaacagaaaaatttgatgagaactccatt
cagttgtttggtccaggaattcagcctcaccattgtgacttaacaaatatggatggagtt
gttacagttactcctagaaatattgatgcggagacctatgtggaagggcaacgtatctca
gagacaactatgttgcagagtggcatgaaggttcagtttgggacgtctcatgtatttaaa
tttgtaggccccagtcaagatcatatcattgccaaaagagctatggatggaggcctgatg
gttaaaggtccaaggcataaacctggaattgtccaggagacaacctttgatttggaagga
gatattcatagtggaacagcaatacctaccagcaagagtaccaccagactggacagcgac
aggatatcatcaacatcgagcacagcagaacgagggatggtgaagccaatgattagagta
gagcaacaacaggactatagaagacaagacagcagaactcaggatgcccctggtcctgaa
ttaatactgcctgcaagtatagaattcagggaaagttctgaagattcatttttatcagct
attataaattatacgaatagttctacagtgcattttaaactatcacctacatatgtgtta
tatatggcatgtcggtatgtactgtcaaatcaatacagacctgaaatcagccctacagag
cgtacccataaagtcattgccatagttaacaagatggtgagcatgatggaaggagttatt
caggaggtagaccaggttgatcagaagcagaagaatattgcaggagcacttgccttttgg
atggcaaatgcatcagaattactcaacttcattaagcaggaccgtgatctcagccgaatc
actctggatgcccaggatattttagcacacttggttcaaatggcattcaaatatttggtt
cattgtcttcaatcagaacttaataactacatgccagcctttctggatgatcctgaagaa
aacagtctacaaagacctaaaatagatgatgttttgcacacactcactggagctatgtca
ttattgcgaagatgtagagtaaatgctgccctgacgattcaactcttctctcaactattt
cattttattaatatgtggctgtttaacagacttgttactgacccagattcagggttgtgt
tctcattactggggagccattatccgtcagcagttggggcatatcgaggcatgggcagaa
aaacaaggcctagagctcgctgctgactgccatctcagcagaattgtacaggcaaccaca
ttacttaccatggataagtattcacctgaggatattccaaatattaacagtacctgcttt
aagctgaattcattacaacttcaagccttattacaaaattaccactgtgcaccagatgaa
ccttttatcccatcagatctcatagaaaatgtagtagctgttgctgaaaatacagctgat
gaattagcacgtagtgatgggagagaagtacaattagaagaagatcctgatcttcagcta
ccttttcttctgccagaagatggctattcttgtgatgttgtccgaaatgttccaaacggg
ttacaggaatttttagatccactgtgtcagagagggttctgtagattattgcctcatcca
cgttcaccgggcacttggacgatatactttgaaggagcagattatgaaagtcattttatg
cgggagaacactgaactgacacagcctctaagaaaagaaccagaaataatcactgtgaca
cttaagaagcaaaatggaatgggtcttagcatcgttgctgcaaagggtgcaggtcaagat
aaacttggaatttatgtgaagtctgttgtaaaaggaggtgctgcagatgtggatggacgt
ttagctgcaggtgatcaacttcttagtgtggatgggcggagtttagtaggactatctcaa
gaaagggcagcagagctcatgacaagaacaggttctgtagtgacattagaagttgcaaaa
caaggagcaatttaccacggcttggctactctgctcaaccagccttctcccatgatgcaa
agagtttcagatcgaagaggttcaggtaaaccccgaccaaagagtgaaggctttgagttg
tataacaattcggcacagaatggatcgcctgagagtcctcagctgccttggacagagtat
agtgaaccaaagaaactcccaggagatgacaggctcatgaagaacagagctgatcaccgg
tccagccctaatgtagcaaatcagcctcctagtcctggagggaaaaatacatatgccact
ggaacatcagctaaaataacatctgtttctactggaaatctttgtacagaggagcaaaca
ccaccaccaagacctgaggcttatcctatcccaactcagacatataccagagagtacttt
acatttccagcttccaagtcccaggatcgtatggttcctgttcagaatcagtggaccaat
tatgatgaaaaacaacagatccagacagataataatcattccagtgtcataattcagcgt
gttactcgttcccaagaagaattgagagatgatcaagtttaccagacagaatgtcatcgc
aaagatgcagactatttagatcgaaagtctgacagtgacatgtggataaatcagagctct
tctatggaatctagcacatctagccaagaattcttgaaccattcttctaagtccattacc
ccagcttctactttaaccaaaagtggtcctggccgttggaaaacaccaacagctcttcaa
ccaactccagtggctatttcccaacctattcgaacagatcttcctcctccacccccacct
cctcctgtgcactatgcaactgacttcgatggggttccattggatttacctctgcctccc
cctcctcctctgcatcaggtaggatcccaggctactccagcagcagctgcagaacgtaaa
aagagagaagaacaccagcggtggtatgaaaaggaaaaagctcgtttagaagaagagaga
gagaggaagcgacgagaacaggaaagaaagctggggcaaatgcgcactcagcccttgacc
cctagtcaagttactcctggacctgtgcagcagataaagccagaaaagccatccacctta
cagagaccccaagaaaccgtcatccgggagctacaaccccaacagcagccacggacaatt
gaacggagagatttgcaatatattacaatcagcaaagaagagctttcctctagtgatagt
ttgtctcctgacccatggaaacgggatgccaaagaaaagctggagaagcagcagcaaatg
cacattgtagacatgctaagcaaagagattcaggatcttcaaaacaaacctgatcggaca
gcagaagaaaatgaccgtttgcgaaaactcatgctagagtggcagttccagaagagactc
caagaatcaaagcagaaggatgaagatgatgaggatgaggaagatgatgatgtagatacc
atgttaattatgcagcgcctagaggccgaaagaagaaccagggtaaaggggaaaaatcct
ttgggtcagactgctatgccagcaatctctgttctagatttgttacaggatgaagaaagg
agacgtcaacaacagttagaagagatacgtaaacgagaagcagaagacagggccagacag
gaagaagatcgtcggcgccaagaggaggagcgagcaaagcgagatgctgaagaaaagagg
cgacaggaggaagggtattacaaccgtttggaggctgaaaggcgccgacagcatgacgag
gcagagcggaggctgctggagcctgacgagcctggtctgtacagaccgccacttccacgg
gactatgaactcccacccccacccccttcatctaatgctcctcctcccccacctcaacga
aacacctcttacctcaaaacacaggtcctctcccctgacacggtatacactgccaagttt
gttgcatacaatgaggaggaggaggaggaggaggactccagtctagcaggtcaggataag
tactcctgcacgagaaaatcttatggggacttccctcctgccgcccttaagccacagcag
ccctgctgtcagcctcgcccagtctccgatggcatctatctttccaactcattccagcca
ccctcggtcaatgccaacagtactgcttacaaaacaggccagccccctcccccaccaaaa
aaaccaagtttctaccatcccagcaactcaaaaggaccaaactcttacactgggtctact
ggagcagttgttggtgtccatgaggtttatagagatccaagagagaaaagatctaaaagc
caagatgcagatttacccggagtttctggagcccctgaaaatttgacattcaaggaacgt
cagcgtctcttttctcagggccaagatgtatccaataaagtaaaggcttctaggaaatta
acagaactggaaaatgaactgaatacaaaataa
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