Antechinus flavipes (yellow-footed antechinus): 127562628
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Entry
127562628 CDS
T08818
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
127562628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127562628
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afz03310
]
127562628
Transcription factors [BR:
afz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127562628
Nuclear receptors [BR:
afz03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127562628
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127562628
NCBI-ProteinID:
XP_051854463
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Position
1:240376063..240635896
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AA seq
459 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQNGEAEALAR
VYSSSISNGLNNLNNETGGTYSNGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKTREALWQQCAVQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCTTVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctctggaatc
cactacggagtcatcacatgtgaaggttgcaagggattctttcgaaggagccagcagaac
aatgcatcttactcctgcccaaggcagagaaactgtttaattgacagaacgaacagaaac
cggtgccaacattgccggctgcagaagtgtcttgccctaggaatgtctcgagatgctgtc
aaatttgggaggatgtccaagaagcaaagggacagcctatatgcagaagtgcagaagcac
cagcaacggcttcaggaacagcggcaacagcagaatggggaggcagaggcccttgccagg
gtctacagcagcagcatcagcaatggcctgaacaacctgaacaacgaaacaggtggcacc
tattccaatgggcatgtcattgacttgccaaaatctgaggggtattataatgtggattca
ggccagccatccccagatcagtcaggactggatatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacttctgtacccaacttgtttacctatagctctttcaacaat
gggcaattagcaccagggataaccatgactgaaatagatcgaattgcacagaacatcatt
aagtcccatttggagacgtgtcaatacaccatggaggagctacatcagctagcctggcag
actcacacatatgaagaaattaaggcgtatcagagcaagaccagagaggcattgtggcaa
cagtgtgctgttcagatcactcacgcaatccaatatgtggtggagtttgcgaagaggatc
acaggtttcatggagctctgtcaaaacgatcagattctactcctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgtcgtgccttcaacccactaaacaacactgttctgttt
gaaggaaagtatggaggaatgcaaatgttcaaagccttaggttccgatgacctggtgaat
gaagcattcgacttcgcaaagaatttgtgttccttgcagctgacagaagaagagattgcc
ttgttctcatctgctgtgctgatatctccagaccgagcctggctaatagaacctcggaag
gttcagaagcttcaggagaaaatttatttcgcacttcagcatgtgattcagaagaatcac
ctcgatgatgagactttggcaaagttaatagccaagataccgaccatcaccgcagtttgc
aacttgcatggagagaaactgcaggtatttaagcaatctcatcctgatatagtgaacaca
ctatttcctccattatataaggagcttttcaaccctgactgtactacagtctgcaaatga
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