Antechinus flavipes (yellow-footed antechinus): 127562868
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Entry
127562868 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04115
p53 signaling pathway
afz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127562868
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
127562868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127562868
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127562868
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127562868
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127562868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
WD40_MABP1-WDR62_2nd
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127562868
NCBI-ProteinID:
XP_051854859
LinkDB
All DBs
Position
4:420196590..420436735
Genome browser
AA seq
748 aa
AA seq
DB search
MSGSRQAGPGAAGSGPGSSAASSVTSASSSSSSSSSPPTLTAVVAAAGSSGSAGSGGLGA
TVRPLMVAAAVSGSGGGGGGGGGALAAGLSRLGGSTRPGSAVNSGGGSSGSGSRKRPLLT
PLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLPN
VNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVE
EMSGLYSPVSEDSKVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQSSIVLRGIWFHSYLT
KKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRVSDESRTASQLDEFQECLSKFTRYN
SVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYP
ENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNL
MDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYY
DLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEK
NFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV
CWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagccgccaggctggtcccggcgctgccgggtcagggcccggctcctccgcg
gcctcctcggtcacttccgcctcctcgtcgtcttcgtcgtcgtcgtcgcccccgacccta
acggcggtggtggccgcggcaggctccagtgggtccgccggctcggggggcctcggggcc
actgtgcggcctctaatggtggccgccgccgtgtcgggctcgggaggcggaggaggcgga
ggcggcggagctctggccgcgggcctctcccggcttgggggctcgaccaggcccgggagt
gccgtcaacagcggcgggggcagctcgggcagcggcagcaggaagcggcctctgctcacc
cctctctgcaatgggctcatcaactcatacgaggacaaaagcaacgattttgtctgcccc
atctgttttgatatgattgaagaagcatacatgacgaagtgtggccacagtttctgctat
aaatgtatccatcagagcctggaagacaataataggtgtcccaagtgtaactatgttgtg
gacaatattgaccatctttaccctaatttcttagtaaatgaactcattctcaaacagaag
caaagatttgaggaaaagaggttcaagttggaccattcagtgagtagcaccaatggccac
aggtggcaaatatttcaagatttattgggaaccgatcaagataaccttgatttaccaaat
gtcaacctgatgctggaactacttgtacaaaagaaaaaacagctggaggcagagtcacat
gctgcccaactacagatccttatggaattcctcaaggttgcaaggagaaataaaagagag
caactggaacagatccaaaaggagctaagtgttctggaggaagatattaaacgagtggag
gaaatgagtggtttatactctcctgtcagtgaggatagtaaagtacctcaatttgaagct
ccctctccatcacacagtagtattattgattctacggaatatagtcaacctccaggtttc
agtggcagctctcagagttcaattgtattgagaggaatctggttccatagctacttgaca
aagaagcagccttggtacaacagtacattagcatcacgtcggaaacgcctcactgctcat
tttgaggatttagagcaatgctacttttctacaagaatgtctcgggtctcagatgaaagt
agaactgcaagccaattggatgagtttcaagagtgcctttccaagttcactcgatacaat
tcagttcgacccttggctactttgtcttacgctagtgacctctataatggttcaagcata
gtctccagtattgaatttgaccgagattgtgactattttgccattgctggggtaacaaag
aagatcaaagtatatgaatatgggacagtcatacaggatgcagtggatattcattaccct
gaaaatgagatgacctgtaattccaaaatcagctgtatcagctggagtagttaccataag
aatctattagccagcagtgattatgaaggcacagtcatcctatgggatggattcacagga
cagaggtcaaaggtctaccaggaacatgaaaaaagatgttggagtgttgattttaatttg
atggacccaaaacttttggcttcaggttctgatgatgcaaaagtgaaactgtggtctacc
aacctggacaattcagtggcgagtattgaagccaaggcaaatgtgtgctgtgtcaaattc
agcccttcgtctagataccatttggcttttggctgtgcggatcactgtgtccattattat
gaccttcgcaacactaaacagcccatcatggtgttcaaaggacatcgaaaggcagtttcc
tatgcaaagtttgtgagtggggaagaaattgtttctgcgtcaactgatagtcaactgaag
ttgtggaatgtagggaaaccacactgtttgcgttccttcaagggccatatcaatgaaaag
aattttgttggattggcttccaatggagattacatagcctgtggaagtgaaaataattcc
ctctacttatactacaagggcctttcaaagacgttgctgacttttaaatttgatacagtc
aaaagtgtcttagacaaggaccggaaagaagatgacacaaatgaatttgttagtgctgtt
tgttggagggcactaccagatggggagtccaatgtgctgattgctgctaacagtcagggg
acaattaaggtgctcgagttggtatga
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