Antechinus flavipes (yellow-footed antechinus): 127562873
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Entry
127562873 CDS
T08818
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04151
PI3K-Akt signaling pathway
afz04510
Focal adhesion
afz04512
ECM-receptor interaction
afz04518
Integrin signaling
afz05165
Human papillomavirus infection
afz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
127562873
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127562873
04518 Integrin signaling
127562873
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127562873
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127562873
09172 Infectious disease: viral
05165 Human papillomavirus infection
127562873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
afz00536
]
127562873
Glycosaminoglycan binding proteins [BR:
afz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127562873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_VIN3
EGF_2
FN3_Tor_3rd
Interfer-bind
Uroplakin_II
DUF7949
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
127562873
NCBI-ProteinID:
XP_051854865
LinkDB
All DBs
Position
4:421267645..421376636
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AA seq
1358 aa
AA seq
DB search
MAVDGETVVLKNMLIGVNLILLGSVLKPSECQLEVTTERVRRQAVEEEGGFVNYSASSKE
HPMIFNHVYNINVPLDSLCSSGLEASAEQEVSAEDERMTEYMDHTSDSESQVTFTHRINL
PKKACKCSSSTQLMQELLSRIEMLEREVSLLRDQCTSNCCQENAATGQLDYIPHCSGHGN
FSLESCGCICNEGWFGKNCSEPYCPMGCSSRGVCVEGQCVCDSDYSGDDCSELRCPTDCS
NRGLCVDGECVCEEAYTGEDCSELRCPGDCSGKGRCSNGTCFCQEGYVGEDCGQRRCQNA
CSGRGHCQDGLCFCEEGYQGPDCSAVAPPEDLRVAAISDRSVELEWDGPMAVTEYVISYQ
PTVLGGLQLQQRVPGDWSAITIKELEPGLTYNISVFAVISDTLSLPAIAKVSTHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKDQARSPPTSASISTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VDGEGGRTTFRLQPPLSQYSVQALRPGSHYQVSVSAIRGTNESTSTTTHFTTEIDAPKNL
RVGSRSATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELMAPKNSGPTTRATLTNLVPGT
EYGVGISAIMGNQQSVPATMNARTDLDSPRDLMVTASSETSISLIWTKAGGPIDHYRITF
TPASGMSSEITVPKDRTSYTLTDLEPGTEYIISVTAERGRQQSLESTVDAFTGFRPITHL
HFSHVTSSSVNITWSDPSPPADRLILNYNPRDKEEEALEVSLDATKRHAILMGLQPATEY
IVNLVAVHGMVTSEPIVGSITTGIDPPKDIIISNVTKDSVTVSWRPPIASFDYYRVSYRP
TQVGRLDSSVVPNTVNEFTVTNLYPATEYEISLNSVRGREESERICTLVHTAMDNPIDLV
ATNITPTEALLQWKSPVGEVENYILILTHSSVAVETILVDGINEEYQLVGLLPNTHYTII
MYATNGPLASSTIEANFTTLLDPPTNLTASEVTRQSALISWQPPIADIENYILTYKSNDG
SRKELIVDAEDNWIRLEGLSENSEYTVLLQSAQDTVHSVITSASFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTISINGDLSQKVQVYCDMSTDGGGWIVFQRRQNGLTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAVYAYYDKFSIGDSRSLYKLRIGDY
NGTAGDSLTYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRPMIGRKRRSLQL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgatggtgaaacagtggtactgaagaacatgctcattggggtcaatttgatc
ctgcttggttctgtcctcaaaccctctgagtgtcagctggaagtgacaacagaaagggtc
aggagacaggcagtagaggaggaagggggatttgtcaactatagtgcatccagcaaagag
catcctatgatcttcaaccatgtatataatatcaatgtccccttggacagcctctgttcc
tctggtctggaggcttcagcagagcaggaggtgagtgcagaagatgagaggatgacggaa
tatatggaccacacctcagacagcgagagccaggtcaccttcacccacaggatcaacctt
cccaaaaaggcctgcaaatgttcctcctctacccagctcatgcaggaacttctgagtcga
attgaaatgctggagagggaagtgtctctgcttcgagaccaatgcacctccaactgctgc
caggaaaacgcagccacaggtcaactggattatatcccacactgcagtggccatggaaat
ttcagcctggagtcctgtggttgcatctgcaatgaaggctggtttgggaaaaactgttca
gaaccctattgccccatgggctgctccagccggggagtgtgtgtggaaggccagtgcgtg
tgtgacagtgactatagtggtgacgactgctcagagctccggtgcccaacggactgcagc
aaccgagggctctgcgttgatggcgagtgtgtctgtgaagaggcttacacgggagaagac
tgcagtgaactgaggtgtcctggggactgctcagggaaggggagatgctccaacggcact
tgcttctgccaagagggctatgttggggaagactgtggccagcgccggtgtcagaatgcc
tgcagtgggcgagggcactgtcaagatgggctctgcttctgtgaggaagggtaccagggt
cctgactgttcagcagttgcccctcccgaggacctgcgtgtagcagcaatcagcgacagg
tccgttgagctggaatgggacggaccaatggcggtgacagaatatgtgatctcttaccag
ccaacggtcctgggaggccttcagctccaacaacgggtgcccggggattggagtgccatc
accatcaaggagctggagccgggacttacctacaacatcagtgtctttgctgtcattagc
gacaccctcagtctccctgccattgccaaggtgtccactcatctctccacccctcaaggg
ctgcaattcaagactatcacagagaccaccgtggaggtgcaatgggaacccttctctttc
tcattcgatgggtgggagatcagcttcatcccaaagaacaatgaagggggagtgattgcc
caactccctagtgatgtcacatccttcaaccagaccgggctaaagccaggggaagagtac
atcgttaatgtggtggctctcaaagatcaagcacggagccccccaacatcagccagcatc
tcaactctcattgatggacctacacagatcttagttcgagatgtctcagacactgtggcc
ttcgtggagtggaccccgcctcgagccaaagttgatttcattctcctgaaatacggacta
gtggatggagagggtggtaggactactttcaggcttcagcctcctctgagtcagtattct
gtgcaagccttaagacctggttcccactatcaagtctcagtcagtgccattcgggggacc
aatgaaagtacttccaccaccactcacttcacaacagagatcgatgcccccaagaactta
cgggtgggctcccgttcagcaaccagcctggaccttgaatgggacaacagtgaagctgaa
gttcaggagtacaaggtggtatacagcaccctggcgggtgagcaataccatgagctgatg
gcccctaagaattcaggccctaccaccagagccaccctcacaaatctcgtgccaggaaca
gaatatggtgttgggatatcagcgatcatgggcaatcaacagagtgtaccggccaccatg
aatgctaggactgatctggacagtccacgtgacctcatggtgacagcttcctccgagacc
tccatctccctgatctggaccaaggccggcggccccattgaccactacagaatcaccttc
acacccgcatctggaatgtcctcggagatcacggtgcccaaagacaggacctcttacaca
cttacagacctggagcccggtactgaatacatcatctcggtcactgcggagaggggcagg
cagcagagcctggaatccacagtggacgccttcacaggtttccgtcccatcacccatcta
cacttctctcatgtcacttcatccagtgtaaacatcacctggagtgacccatcccctcca
gctgacagactcatcctgaactacaatccccgggataaggaggaagaggctttagaagtc
tcactagatgctaccaaaaggcacgccattctgatgggtctgcaaccagctactgagtat
atcgtgaacctggtggctgttcatgggatggtaacttctgagcctattgtgggctccatc
accacagggattgatcctcctaaagatataataataagtaacgttaccaaggactctgtg
actgtctcctggaggcctcccattgcatcttttgattactatcgagtatcctatcggccc
acacaagtggggagactagacagctctgtggtacccaacacagtcaacgaattcacagtc
accaacctgtatccagccacagaatatgaaatcagcctgaacagcgttcgaggccgagag
gagagtgagcgcatctgcacacttgtacatacagccatggacaatcccatagatctggtt
gccaccaacatcaccccaacagaagccctgctacagtggaaatcacctgttggtgaagtg
gaaaactacatccttattttaacacactcctcagttgccgtggaaacaattctagtggat
ggaatcaatgaagagtaccagcttgtgggtctgcttcctaatactcactacacaatcatc
atgtatgctaccaatggacctcttgccagcagcaccatcgaagccaatttcaccaccctt
ctggatccacctacaaacttgactgccagtgaggtcaccagacagagtgccctgatttcc
tggcagcctcctatagcagacattgagaactacatcttgacctataaatccaatgatgga
agccggaaagagttgatcgtggatgcagaagacaattggatccgcctggaaggactttca
gagaactctgaatatacagtgctcttgcaatcagcccaggatactgttcacagtgttatt
acctctgctagcttcaccacagggggtcgggtgttccctcatcctcaggactgtgcccaa
catttgatgaatggagatacactcagtggggtttataccatctccatcaatggggatctg
agccagaaggtccaggtatactgtgatatgtcaacagatggaggtggctggattgtgttc
cagagacggcagaatggcctgacagattttttccggaaatgggcagagtaccgagttggt
ttcggaaacttagaggatgagttttggctggggctggataacatacacaagatcacatcc
caggggcgatatgagttgcggatagacatgcgagacggccaagaagcggtttacgcctat
tatgacaagttctctattggggatagtagaagcctctacaagctccgaataggagactac
aatggcactgctggggattcccttacttatcaccaggggaggccattctccactgaggac
agagacaatgatgttgctgttaccaattgtgccatgtcctacaagggagcttggtggtat
aagaactgccaccgaaccaacctaaatggaaagtatggtgaatccaggcacagtcagggg
atcaactggtatcactggaaaggccacgagttctccatcccctttgtggaaatgaagatg
cggccttataaccaccgacctatgattggaagaaaacgaaggtccctacagctgtga
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