Antechinus flavipes (yellow-footed antechinus): 127562948
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Entry
127562948 CDS
T08818
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05168
Herpes simplex virus 1 infection
afz05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127562948
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127562948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127562948
03021 Transcription machinery [BR:
afz03021
]
127562948
Transcription factors [BR:
afz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127562948
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127562948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127562948
NCBI-ProteinID:
XP_051854988
LinkDB
All DBs
Position
4:complement(429156197..429389918)
Genome browser
AA seq
762 aa
AA seq
DB search
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDANTGTQTNGLDFQKQPVPVGG
AISSAQAQAFFGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAPI
PQTQLMLAGGQITGLALTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAATP
MTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLE
EPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMC
KLKPLLEKWLNDAENLSSDSALSNPSALNSPGQGIEGLNRRRKKRTSIETNIRVALEKSF
LENQKPTSEEITMIADQLKMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPT
SLVATTPSLVTSSAATTLTVNPVLPLTSAAVTNLSVTGTTETTSNNTATVISTAPPASSA
VTPPSLSPSPSASASEASSASETSTTQTTSAPLSSPLGTSQVMVTASGLQTAAAALQGAA
QLPANASLAAMAAAAGLSPGLMAPSQFAAGGALLSLNPGTLGSALSPALMSNSTLATIQA
LASGGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASAG
TSAPVASLHATSTSAESIQNSLFTVASAGGAASTTTTASKAQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagccgcggcggcagcagcagca
gactcaagaatgaacaatccgtcagaaacaagtaaaccatcaatggaaagtggggatgcc
aacacaggtacacagacaaatggcctagactttcagaagcagcctgttcctgttggagga
gcaatctcttcagctcaagctcaggccttctttggacacctacatcaggtccaacttgct
ggaacaagtttacaggctgctgctcagtccttaaatgtacagtctaagtctaatgaagaa
tctggggattcccagcagccaagccagccttcccagcagccttcagtgcaggcacccatc
ccccaaactcagctcatgctggctggaggacagataacagggcttgccctgaccccagct
cagcagcagttactgctacagcaggcacaggcccagctgctggcagctgcagttcagcat
tcggccagccagcagcacagcgccgcgggtgccaccatctcggcctccgctgcaacgcca
atgacacagatccctctgtcacagcccatacagattgcacaggatctgcaacagctgcaa
cagctacaacagcagaatctaaacctgcaacaatttgtgttggtgcatccaaccaccaac
ttgcaaccagcacagtttatcatctcgcagacgccacaggggcagcagggcctcttacaa
gcgcagaatcttttaacacaactacctcagcaaagccaagccaacctcctgcagtctcag
ccaagcatcaccctcacctcacagccagcaaccccaacacgcacaatagcagcaacccca
attcagacactcccacagagccagtcaacaccaaagcgaattgatacacccagcttggag
gagcccagtgaccttgaggagcttgagcagtttgccaagactttcaaacaaagacggatc
aaacttggattcactcagggtgatgttgggctcgctatgggcaaactctatggaaatgac
ttcagccaaactaccatctctcgctttgaagccttgaacctcagctttaagaacatgtgc
aaattaaaaccacttctagagaagtggctaaatgacgcagagaacctctcatctgattca
gcactctctaacccaagtgccctgaattctccagggcaggggattgagggtttgaaccgc
aggaggaagaaacgcaccagcatagagaccaacattcgtgtggccttagagaagagtttc
ctggagaatcaaaagcctacctcggaagaaatcaccatgattgctgatcaactaaaaatg
gaaaaggaggtgatccgtgtttggttttgtaatcgccgccagaaggagaaaaggattaat
ccacctagtagtggtgggaccagcagctcacctataaaagcaatttttcccagtccaacc
tcattggtggcaaccacgcccagccttgtgacaagcagtgcggccactaccctgacggtc
aatcccgtcctccctctaaccagcgcggcggtaaccaacctctctgtgacaggcactaca
gaaaccacctccaacaacaccgcaacagtgatttcgacagcacctccagcttcctcagca
gtgacacccccctctctgagcccctccccttctgcctccgcctctgaggcatccagtgcc
agtgagaccagcacaacacagaccacctccgcccctttgtcctcccctcttgggaccagc
caggtgatggtgacagcatccgggctgcagaccgcagctgctgccctccaaggagctgct
cagctgcctgcaaatgccagtcttgctgcaatggctgctgcagcaggtttaagtccaggg
ctgatggcaccctcacagtttgcagctggaggtgccttactcagtctcaacccagggaca
ttgggcagtgctctcagcccggctctgatgagcaatagtacactcgcaaccattcaagct
cttgcatctggtggatctcttccaataacatcactggacgcaactgggaacctggtattt
gccaatgcaggaggaactccaaacatcgtgaccgccccgctgttcctgaatcctcagaac
ctctctctgctcaccagcaacccagtcagcctggtctcggcggccgcagcctccgcaggg
acctccgcaccagttgccagccttcacgccacctccacctcagctgagtccatccaaaac
tctctcttcactgtggcctctgctggtggggctgcttccaccaccactaccgcctcgaag
gcgcagtga
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