Antechinus flavipes (yellow-footed antechinus): 127563077
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Entry
127563077 CDS
T08818
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4B-like
KO
K10609
cullin 4
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03420
Nucleotide excision repair
afz04120
Ubiquitin mediated proteolysis
afz05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127563077
09124 Replication and repair
03420 Nucleotide excision repair
127563077
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127563077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127563077
03400 DNA repair and recombination proteins [BR:
afz03400
]
127563077
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afz04147
]
127563077
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
127563077
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127563077
TCR (transcription coupled repair) factors
Cul4-CSA complex
127563077
Exosome [BR:
afz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127563077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
YtxK_like
COG5_C
Motif
Other DBs
NCBI-GeneID:
127563077
NCBI-ProteinID:
XP_051855265
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All DBs
Position
4:complement(7984771..7987630)
Genome browser
AA seq
891 aa
AA seq
DB search
MFPTGFSFPSPPVAAAPPSQEVRPATDGYNSTSPTLATFTSCFKKRKLNNNYSSNKKKTD
PIPSSCSSPRIPLPPXSTTFTASCPGISVAILKYHYLQKKLHLEDSLDFIGLXVKMAEES
TSSSSPELAADQQQELKNKNLLPPSVAKGQHANELLRAPSTTSSFTTSKPGSAKKLVIKN
FKEKPLPENYTEKLWQKLKEAVEAIQNSTSITYNLEELYQAVENLCSYRISAKLYKQLRQ
ICEEHIRTQIHQFREDSLDSVLFLKKIDKCWHNHCRQMSMIRSIFLYLDRTYVLQNSMLP
SIWDMGLELFRTHIISDQTVQNRTIEGILLLIDRERNGEAIDRSLLRSLLSMLSDLQIYQ
DSFEQRFLEETNQLYAAEGQRLMQEREVSEYFHHVNRRLEEEEDRLITYLDLTTQKPLIA
TVEKQLLGEHLTAILQKGLSHLLDENRTQDLSLLYQLFSRVCNGVQVLLQYWTEYIKAFG
SAIVINPEKDKTMVQELLDFKDKVDYITEISFMKNERFVNATKEAFETFINKRPNKPAEL
IAKYVDSKLRAGNREATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLVKRLLVGKSAS
TDAEKSMLSKLKHECGPVFTSKLEGMFKDIELSKDIMVQFKQYVQNQNSPVSIELTVNIL
TTGHWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKE
LQVSLFQTLVLLMFNDGKEFSVEDIKQATGIEDGELRRSLQSLACGKARVLMKNPKGKDV
EDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTEKVFQDRQYHIDAAIVRIMKIRK
ALDHNQLISEAYNQLRFPVKPADLKKRIESLIDRDYMERDKENPNQYNYVA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttctcattccccagccccccagttgctgctgctcctccttcccag
gaggtcagacctgccactgatggttataacagcaccagccctactttggccacctttacc
tcctgtttcaagaagagaaagttaaacaacaactacagcagcaacaaaaagaagactgat
cccatcccttcttcctgctcctccccaagaattcctctcccacctncttccaccactttt
acagcttcttgccccgggatttcagttgccatcctcaagtatcactacctccagaagaaa
ctgcacctggaagactccttggattttataggcttanttgtgaagatggctgaggaatcc
acatcttcttcttcacctgaacttgctgcagatcagcagcaagaacttaaaaacaaaaac
ttattacccccctctgtggctaaagggcagcatgcaaatgagcttctcagagccccctct
actacctctagctttaccaccagtaaaccaggctcagccaagaaattggtgatcaagaac
tttaaagagaaacctcttccagaaaactacacagagaaattatggcagaaactgaaggaa
gcagtagaagccattcagaacagtacttcgattacatacaatttagaagaactctatcag
gctgttgaaaacctctgttcctacaggatctctgcaaaattatacaaacagctgagacaa
atttgtgaagaacacatcagaacccaaattcaccaattccgagaggattcattggacagt
gttctctttctaaagaagatagataagtgctggcataatcactgcagacaaatgtccatg
attaggagcatttttttgtatttggatagaacgtacgttcttcagaattcaatgctgcct
tccatttgggacatgggtctagaattatttaggacccatataattagcgatcagacagtc
cagaacaggactattgaaggcattctccttttgattgatagggaaaggaacggtgaagca
attgacaggagtttgctcagaagcctcctgagtatgctttcagacttgcagatttatcaa
gattcttttgaacaaagatttttggaagaaaccaaccagctatatgcggccgaggggcag
cgtttgatgcaagaaagagaggtttctgaatactttcatcatgtcaacagacgtctagaa
gaagaagaagataggctgatcacttatctagatctgactactcagaagccactaattgca
actgtagaaaagcagctcctgggtgaacatttaacagccatccttcagaaaggtttaagt
caccttcttgatgaaaatcggactcaagatttgtctctactctatcagctatttagcagg
gtatgcaatggagttcaggttctcttgcagtactggactgaatacatcaaggcatttggc
agcgctattgtcatcaatcccgaaaaagataagaccatggtacaggaattgctggacttt
aaagataaagttgactatattacggaaatcagttttatgaaaaacgaaaggtttgtcaat
gccacgaaggaagcatttgaaaccttcattaacaaaagaccaaataagcctgctgagctc
atagcaaagtatgtggattcaaagctccgtgcaggtaacagggaagctacagatgaagaa
cttgagaaaatgttggacaagatcatgatcatatttcggttcatttatgggaaagatgtc
tttgaagccttttataagaaggacttagtcaaaaggctgttggttggaaagagcgcatcg
acagatgctgaaaagtcgatgctttcaaaactcaagcacgaatgtggacctgtgttcacc
agcaaactagaagggatgttcaaagacatagagctgtccaaagatatcatggttcaattc
aaacagtatgtgcaaaaccaaaactctcctgttagcattgaactgaccgtgaatatcctg
acaacaggtcactggccaacctatgtgcctatggaggttcacttaccggctgagatggta
agactccaggagattttcaagactttttacttaggtaaacacagtgggaggaagcttcag
tggcaatcgacgctaggacactgtgtactaaaagcagaatttaaagagggcaaaaaggag
cttcaggtctctcttttccaaacactggtgttgctaatgtttaacgatggcaaagaattt
agtgtagaagacatcaagcaagctacaggaatagaggatggagaattaaggagatcactc
cagtccttagcctgtggcaaagctagagttctgatgaaaaatcccaagggcaaagatgtg
gaagatggtgataaatttacttgcaacgatgacttcagacacaaactcttcaggataaaa
atcaatcaaatccagatgaaagaaacagtagaggaacaagcaagcactaccgaaaaagtc
tttcaggaccgacagtatcacattgatgctgcaattgtgagaatcatgaagataagaaag
gctctagaccacaatcagcttatttcagaagcatataatcaactgaggttcccggttaag
cctgctgatctcaagaagagaatagaatccttaattgacagggactacatggaaagagac
aaagaaaacccaaaccagtacaattacgttgcctaa
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