Antechinus flavipes (yellow-footed antechinus): 127563084
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Entry
127563084 CDS
T08818
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04136
Autophagy - other
afz04140
Autophagy - animal
afz04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127563084
04136 Autophagy - other
127563084
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127563084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127563084
03029 Mitochondrial biogenesis [BR:
afz03029
]
127563084
Membrane trafficking [BR:
afz04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
127563084
Others
Specific organelles associated proteins
Auto phagosome
127563084
Mitochondrial biogenesis [BR:
afz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127563084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
INO80F
APEH_N
CCDC93_CC
WD40_like
Erf4
HEF_HK
WH_CYT4
Beta-prop_WDR19_2nd
AP5B1_middle
Lipoprotein_6
V_ATPase_I
Fez1
PUMA_CC
NPV_P10
Motif
Other DBs
NCBI-GeneID:
127563084
NCBI-ProteinID:
XP_051855273
LinkDB
All DBs
Position
4:complement(8371430..8399855)
Genome browser
AA seq
624 aa
AA seq
DB search
MSTGLRGAGLPSWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKADLQSVLADKLQAEK
YDVQGRHEISPGHDGMWNDAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAECLQKISELETECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLVDEASDATEETSPIRAISRTATKRLSQPAGGLLDSITNIFGLSESPLLGHHPSSDAA
RRRSVSSLPVPQDNPDAHPSSNKEVQVPTTAVYVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVFGDKCEAKGSLSGSNAGITSIEFDSAGSYLLASSNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIIRELELLGKITALDLNPERTDLLSCSRDDLLKIIDLRVNAVK
QTFSAPGFKCGSDWTRVVFSPDGGYIAAGSAEGSLYIWNVLTGKVEKVLSKQHSSSINAV
AWSPSGTHVVSVDKGNKAILWSEY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgggcctccggggcgccgggctcccgagctggaagcgccacatcgcggaggag
ctgcggcggcgggaccggctccagaggcaggccttcgaggagatcatcgctcagtataat
aagttgctggagaaagcagatcttcagtcggtgttggctgataaactacaagcagaaaaa
tatgatgtgcaaggaaggcacgagatcagtccaggacatgatggcatgtggaatgatgct
cagctacaagaaatggcccagctgaggattaaacatcaagaagaattaactgaattacac
aagaaacgtggggagttagctcagtcggtgatcgacctgaataaccagatgcagcagaag
gaccgggagatgcagatgaatgaagcaaaaattgctgaatgtttgcaaaaaatcagcgag
ctggaaacagagtgccaagaacttcgaaataagctgcaggacctcgaaagagccaaccag
acactcaaggatgaatacgatgccctacagatcacctttactgccttagaagagaaactg
cggaagaccacggaagacaaccaagagctggtcactcgctggatggccgagaaagcccag
gaggccaaccgtctcaacgcagaaaacgagaaggactcccggcgccgccaggcccggctg
cagaaggagctcgcggaagccgccaaggaaccattgcccgtagaaccggatgatgacata
gaagtgcttgtggatgaagcttcagacgcgactgaggagacgtcgcccattcgagcaatc
agccggacagccactaagcgactctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacaccacccttcttctgatgctgcc
aggaggcgctctgtctcctcccttcctgttcctcaggataacccagatgctcatcctagt
tctaataaagaagtgcaggtccccacgactgcagtttatgtctttgacgcccacgacgga
gaagtgaacgctgtgcaattcagccccggctccaggttactcgccacaggaggcatggat
cgaagagttaagctttgggaagtgtttggagataagtgtgaggcgaaaggctccctttct
ggcagtaacgcgggaatcaccagcattgaatttgacagtgctggatcttaccttttggca
tcttcaaatgattttgccagcagaatctggactgtggatgataaccggttacggcacacg
ctcacggggcacagtggaaaagttctttctgccaagttcctgctggacaacgcgcggatt
gtttcgggaagtcacgaccggacgcttaaactctgggatctgcgcagtaaagtctgtata
aaaacggtttttgctggatccagttgcaatgatatcgtctgcacagaacagtgtgtaatg
agtggacattttgacaagaaaatccgtttctgggacatacgatctgaaagtataatccgg
gaattggaactcttggggaagatcacagcccttgacttgaatccagagagaacagatctc
ttaagctgctcccgagatgatcttctgaaaattattgacctacgagttaatgctgtcaaa
cagaccttcagtgctccaggattcaagtgtggctctgattggacccgagtcgtgttcagc
cctgatggcggctacatagcagctggctccgcagaagggtctctctacatctggaatgtg
ctcacgggcaaagtggaaaaggtcctttcaaaacagcacagttcttcgattaatgcggtg
gcgtggtcgccttctggcactcatgtggttagcgtggacaaaggaaacaaagctatcctg
tggtctgagtactga
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