Antechinus flavipes (yellow-footed antechinus): 127563409
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Entry
127563409 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04120
Ubiquitin mediated proteolysis
afz04137
Mitophagy - animal
afz04144
Endocytosis
afz04340
Hedgehog signaling pathway
afz04350
TGF-beta signaling pathway
afz04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127563409
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127563409
04350 TGF-beta signaling pathway
127563409
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127563409
04137 Mitophagy - animal
127563409
09144 Cellular community - eukaryotes
04520 Adherens junction
127563409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127563409
04121 Ubiquitin system [BR:
afz04121
]
127563409
03029 Mitochondrial biogenesis [BR:
afz03029
]
127563409
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127563409
Membrane trafficking [BR:
afz04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127563409
Autophagy
Mitophagy
Other mitophagy associated proteins
127563409
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
HECT type E3
127563409
Mitochondrial biogenesis [BR:
afz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127563409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
127563409
NCBI-ProteinID:
XP_051855825
LinkDB
All DBs
Position
1:246505240..246614423
Genome browser
AA seq
730 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDSTGAAGGGNCRFVESPSQDQRLQAQRLRNPEVRGHIQTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQCQLKEPSQPLSVPNEGSLEDEELPAQRYERDLVQKLKVLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYIN
GGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQ
HELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKE
LELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRV
PLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTA
VEETCGFAVE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggactcggagaaacggctccagcatcaagatccggctgacagtactt
tgtgccaagaaccttgcaaagaaagacttcttcagacttcctgacccctttgcaaaaata
gtggttgatgggtctggtcaatgccattcaactgatacagtgaaaaacacattggatcct
aagtggaatcagcattatgatctatatgttggaaaaaccgattcgataaccattagtgtg
tggaaccacaagaaaatccacaagaaacagggagctggcttcctggggtgtgtgcgtctc
ctctccaatgccatcagcagattaaaagatactggatatcagcgtttggatctatgcaaa
ctaaatcccacagatactgatgcagttcgtggccaaatagtggtcagtttacagacacga
gacagaataggcactggaggctctgttgtggactgcagaggactcttagaaaatgaagga
acggtttatgaagactcaggtcctggaaggccacttagctgctttatggaggaaccagcc
ccatatacagacagtactggtgctgcaggtggaggaaattgcagatttgtggaatctcca
agtcaggatcaaagacttcaggcacagagacttcgaaatcctgaggtccgaggtcatatc
cagacccctcaaaatcgaccacatggccaccaatcccctgatctacctgaaggctatgaa
caaagaacgacagtccaaggacaagtttactttttgcacacacagactggcgtgagcaca
tggcatgaccctagaataccaagagaccttaacagtgtgaattgtgatgaacttgggcct
ttaccaccaggctgggaagttagaagtacagtttctgggagaatatattttgtagatcat
aataaccgaacaacccagttcacggatccaagattgcatcatattatgaatcaccaatgc
caactaaaggaacccagccagcctttgtcagtgccgaatgaaggatcattagaagatgaa
gagcttcctgcccagagatatgagagagatttagtacagaaattaaaagtccttagacat
gaactttctcttcagcagccccaagctgggcattgtcgcatagaagtatccagagaagaa
atatttgaggagtcttaccgtcagataatgaagatgagaccaaaagacttaaaaaagagg
ttaatggtgaaattccgtggtgaagaaggcctggattatggtggagtggcccgggagtgg
ctctatttactgtgccatgaaatgctgaatccatattatggacttttccagtattctaca
gataatatttacatgctgcaaatcaatccagactcttcaatcaaccctgatcatttgtct
tattttcactttgttggtcggataatgggtctggctgtgttccatggacactacatcaat
ggaggtttcacagttcctttctacaaacagctgctggggaaacccattcagctatcggat
ttggaatcagttgacccagaactacataaaagcttagtttggattttagagaatgacatc
actcctgtgttggatcatactttctgcgtagaacataatgcttttgggcggattcttcaa
catgagctcaaaccaaatggtagaaatgttcctgttacagaggagaacaagaaagaatat
gtccggttgtatgtaaattggaggtttatgagaggaatcgaagctcagttcctagcactt
caaaaaggatttaatgaactcatccctcaacacttactaaaaccttttgatcagaaggag
cttgagctcataataggaggcctggataaaatagacctgaatgattggaagtcaaatacc
cgtctcaagcactgcatggcagatagcaatatcgtaaagtggttctggcaggcagtagag
acttttgacgaagaaagaagagccaggttgttgcaatttgtgactggttcaacacgagtt
cctctccaaggcttcaaggctttgcaaggttctacaggcgctgcaggacccaggctattt
accatccacttgatagatgcaaatacagacaaccttcctaaggcccacacctgctttaat
cggattgacattccgccttatgagtcttatgagaagctttatgagaagctgctgacggct
gtggaagagacatgtgggtttgcagtggagtga
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