Antechinus flavipes (yellow-footed antechinus): 127563513
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Entry
127563513 CDS
T08818
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127563513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afz04131
]
127563513
Membrane trafficking [BR:
afz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127563513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR3_1st
EIF3I
Beta-prop_WDR5
zf-C3H2C3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127563513
NCBI-ProteinID:
XP_051856001
LinkDB
All DBs
Position
4:11621599..11742882
Genome browser
AA seq
1425 aa
AA seq
DB search
MASEVDPESEEAAPSPRGGLGEGLAQALEASLPRLTCIDLDKDLEFRNELIDDKEFDIPQ
VDTPPTLESILNETDDEDESFVLEDPTLLNIDTFDTHSYDTSSVASSDSGDRTNLKRKKK
LLDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQN
QALRLCLGSTSVGGQYGAISALSINHDCSRLLCGFAKGQMTMWDLASGKLLRSITDAHPP
GTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLHS
KAELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAANN
YVNPTLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSVEK
LHVIDRLTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGGQ
IFYLGTKSVYVMTLRSWRERVDHLLKQECLPEALALAWSFHEGKAKAVVGLSGDASKRKA
VVADRMVEILFHCADRALKKCPDQGKIQVMEQHFQDTVPVVVDYCLRLQRRDLLFSQMYD
KFSENSVAKGVFLECLEPYILSDQLVGITAQVMKDLLIHFQDKKLMENVEALIVHMDITS
LDIQQVVLMCWENRLYDAMIYVYNSGMNEFISPMEKLFKVIAPPLSAGKSLTDEQVIMGN
KLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASSEEEIYPYICTLLHF
DTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLA
KPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAERA
EFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYVHNILSIPGHSPEEKQAVWQKAMQ
HIEELVALNPCKAAELVATHFSGQVEAVIQKLQNPFLLFQFLRSLLDPREGVSVNQESLH
AAPCITEQFIELLCQYNPHQVIDTLQVLESYRLEETIQITQKYQLLEVCAYLLEKKGDIH
GAFLIMLERLQSKLQQFTKESENSRESPSLKAVEEILVETIALCQRNSQSLNQPQREALW
FPLLEAMMAPQKLSSSCAPPRLAEPLKSLTMQVLNSMAAFIALPSILQRILQDPVYGRGK
LGEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLNPKQDYCCICLQ
QYRRRQEVADDIVVFSCGHLYHSLCLLNKECAVGTGSQARWTCYRCNSSNKAGKLSEKAS
EVKKGQLAQAQVKVSPSCPSPRGDAAAKKAPSELGLDPQQIQAFDQLCRLYRGTSRLALL
TELSQNQSGESRRLLGGSKSSPALNSIFQNENFQLHLSPPPLSED
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagtcgatcccgagagtgaggaggcggccccctcgccccgcggaggcctc
ggggaaggcctggcccaggccttggaggcttccctgcccaggctcacctgcatagacctg
gacaaggacctggagttcagaaatgagctgatcgatgacaaggagtttgatattcctcag
gtggacaccccgcccaccctcgaaagcattctcaatgagaccgatgatgaagacgaatcc
ttcgttcttgaggatccgacgctgttaaatatcgacacctttgacacgcactcctacgac
acgtcgtcagtggcgagctccgacagcggtgatcgaaccaatctgaagaggaagaagaag
cttcttgactctttttctctccatggctcagtcatgcggcattcgcttctgaaggggatc
tctgcccagatcgtctcggcagctgacaaagttgatgccggcttgcctactgcaatagct
gtgtccagtctgatcgcagtggggacttctcatggattggccttaatcttcgatcagaat
caagccctgcgcctctgcttgggcagcaccagcgtcgggggacagtatggggccatctct
gccctcagcatcaaccacgactgctccagacttctctgcggctttgccaaaggccagatg
accatgtgggacttggccagcgggaagctcttgagatcaataacagatgctcacccccca
ggaacagcgattctgcacattaagttcacagatgacccaactctggccatttgcaatgac
agcggcggttctgtgtttgagctgacgtttaagcgagtgatgggagtgaggacgtgtgaa
tcccggtgtctgttcagcgggtccaagggggaagtttgctgcatcgagcctctgcactcc
aaggccgagctgaaggatcaccccataacccagttctccttactggccatggcctcccta
accaaaatattggtcattggactgaagccatctctgaaagtgtggatgacgtttccttat
ggacggatggatccttccagcgtcccgctgctggcctggcacttcgtggctgccaataac
tatgtgaaccccacgctggccttttgccgaggggacgtcgttcacttcctgttggtgaag
cgggatgagtcgggcgccatacacgtcaccaagcaaaagcacctgcacctctactatgac
ctcatcaacttcacctggatcaattcccggacgatcgtgctcctggacagcgtggagaag
ctgcatgtgattgaccggctgacgcaggaggagctggagacggtggaaatctccgaggtg
cagctggtctacaacagcagccacttcaagtccctggccacgggcggcaacgtcagccag
gccctggctctggttggagagaaagcctgttaccagtccatcagcagctatggcggccag
atcttttatttggggacaaaatctgtttacgtgatgacattgaggagctggagagagaga
gtggaccatctcctgaaacaagagtgtctgccggaggccctggctctcgcgtggtccttc
cacgaagggaaggccaaggctgtagtcggcttgtccggggacgccagcaagcggaaggcc
gtcgttgccgaccggatggttgaaatcctcttccactgtgcggaccgagctttgaaaaaa
tgcccggaccagggcaagatccaggtgatggagcagcattttcaggacacggtgcccgtg
gtcgtcgattactgccttcggctgcagcgcagggatctcctgtttagccaaatgtacgac
aagttcagtgagaattcggtggccaaaggtgtcttcctggagtgcctggagccgtacatt
ctgagtgaccagctggtggggatcaccgcccaggtgatgaaggatctgctcattcacttc
caagataaaaagctgatggagaacgtggaggcgctgatcgtgcacatggacatcaccagc
ctggacatccagcaggtggtcctcatgtgctgggagaatcgtctctacgacgccatgatc
tacgtctacaacagcggcatgaacgagttcatcagccccatggagaagcttttcaaggtc
attgctcctcctctgagcgcagggaagtctctgacagatgagcaggtcatcatgggcaac
aagcttctcgtgtacatcagctgctgcttggcgggccgggcttatcccctgggggacatc
cctgaagacctggtgcccttggttaaaaaccaggtctttgagtttctgatccgcctgcac
tctgcggaggcctcgtcggaggaggagatctacccctatatctgcacgctgcttcacttc
gataccagggagttcctgaacgtcctggccctgacttttgaagattttaaaaatgacaag
caggccctggaataccagcagcggatcgtggacatcttgctgaaggtcatggtggaaaat
tccgattttactccttcccaagtcggctgcctcttcaccttcctcgcccgacagctcgcc
aagcccgacaacacgctcttcgtgaacaggacgctttttgaccaggtgctcgagttcctc
tgcagccccgacgatgactcccgacactcggagaggcagcaggtcctcctcgagttgctc
caggccggagggatcgtgcagtttgaggagagccggctcatccggatggccgagagagcc
gagttctaccaaatttgtgagtttatgtatgaacgagagcaccagtacgacaagatcatt
gactgctacctccgggaccccctgagagaggaagaggtgttcaactacgtccacaacatc
ctgtccattcccgggcacagccccgaggagaagcaggccgtgtggcagaaggccatgcag
cacatcgaggagctcgtggctctgaacccctgcaaagcagccgagctggtggccacccat
ttctctgggcaggttgaggcggtcatccagaaactccagaacccgtttctgctcttccag
tttctgaggagcctccttgacccaagggaaggggtttctgtgaaccaagagtctctgcac
gcagccccttgcatcacggagcagttcatcgagctgctgtgtcagtataaccctcaccaa
gtgattgacactctgcaagtccttgagtcctaccggctggaagagaccatccagattacc
cagaagtaccagcttcttgaagtatgtgcctacctcttagagaagaaaggagacattcat
ggtgctttcttaataatgcttgagagactacaaagcaagctccagcagtttacaaaggaa
agtgaaaactcgagagagagcccctcccttaaggccgtggaggagatcttggtggagacc
atcgccctctgccagaggaattcccagagcctgaaccagccccagcgagaggctctctgg
tttcccctcttggaggcgatgatggcccctcagaagctgtccagctcctgcgctccccct
cgcctggcagaacccttgaagtctctgaccatgcaggtgctgaacagcatggcggccttc
atcgctctgccgtccatcttgcagcgaatcctgcaggatccagtttatggaagaggaaaa
cttggcgagatccaaggactgatcctgggaatgctggacacctttaactacgaacaaact
ctcctggagaccaccaccagcctcctcaaccacgacctgcactggtccctctgtaacctg
cgggcctcggtcaccagggggctgaacccgaagcaggattactgctgcatctgcctgcag
cagtaccggcggcgccaggaggtggccgacgacatcgtcgtcttcagctgcggccacctc
taccactccttgtgcctgctgaacaaagagtgtgccgtgggcacggggagccaggcccgc
tggacgtgctacagatgcaattcaagcaacaaggcagggaagctcagcgaaaaggcatcc
gaagtgaagaaggggcagctcgcccaggcccaggtgaaagtgtctccttcctgcccgtcg
ccccgaggagacgctgctgcgaagaaggccccgtcagaactggggctggacccccagcag
atccaggctttcgaccagctctgccgcctttaccggggaacctccaggctggcgctccta
accgagctgtcccagaaccagagcggggagagtcgccggctgctggggggctccaagagc
agccccgccctcaacagcatcttccagaacgagaacttccagctgcacctgagccctccc
cccctgagcgaggactga
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