Antechinus flavipes (yellow-footed antechinus): 127564337
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Entry
127564337 CDS
T08818
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04613
Neutrophil extracellular trap formation
afz05034
Alcoholism
afz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127564337
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127564337
09165 Substance dependence
05034 Alcoholism
127564337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afz03036
]
127564337
Enzymes [BR:
afz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127564337
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127564337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
127564337
NCBI-ProteinID:
XP_051856766
LinkDB
All DBs
Position
5:9238001..10105097
Genome browser
AA seq
1003 aa
AA seq
DB search
MSSPAQPDGVAGREQLLAQQRMHSLINSVEVKSEVPVTLDPVSPLDLRTDLRMMMPMVDP
VLREKQLQQELLLIQQQQHLQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ
QELLEKEQKLEQQRQEQEVERHRREQQQLPPLRGKERGRERAVASTEVKQKLQEFLLSKS
ATKDSPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYPLPGAQDTKDDFPL
RKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVVTSFKKRVFEVTESSVSSSSPGSGP
SSPSNGPSTNMAESSETLLIPPAPHPEQIVSQQRLLIHEESMNLLSLYPSPSLPNITLGL
PAVPSQLSASSSIKDKQKCEAPALRPPGVTLPGQYTGSIPASSSHPHSALEGKPNSSHQA
LLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERVSPGLRGAHKLPRHRPLNRTQSAPL
PQSTLAQLVIQQQHQQFLEKQKQYQQQVHMNKPFLEAQPGHALPTYQAPLAAVGAEAFDQ
HLLISRTRSSPAVPTVPRPAMDPSLQRASETGVVYDALMLKHQCICGRSALHPEHAGRIQ
SIWSRLQETGLLSKCERIQGRKASLEELHLVHSDHHSLLYGTDPLSRQKLDPRMLQGPTS
QKAFSLLPCGGLGVDSDTIWNELHSAAAARMAVGCVIELASKVVSGELKNGFAVVRPPGH
HAEESTAMGFCFFNSVAITAKYLREQLNVGKILIVDLDVHHGNGTQQAFYADPSILYISL
HRYDEGNFFPGSGAPNEVGSGLGEGYNVNIAWTGGLDPPMGDVEYLAAFRTVVMPIAREF
GPDIVLVSAGFDAVEGHAPPLGGYKVTAKCFGNLTRQLMQVADGHVVMALEGGHDLTAIC
DASEACVNALLENELDPVPEDVLHQTPNRNAIISLQKTTEIQSKYWKSVERFSGCALTGT
QEQEQEETETVSALASLSVDVDQCFAKEDSRPAGEPMDEDPAL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagctccccagcacagccagatggggtggctggtcgcgagcagctgttggctcaacag
agaatgcacagcttgatcaactcagtggaagtgaagtcagaggttcctgtgaccctggac
cccgtctcccccctggacctgaggacggatctcagaatgatgatgcccatggtagacccc
gtgctccgggagaagcagctgcagcaggaactgctcctcatccagcagcagcaacacctg
cagaagcagctgctcatcgccgagttccagaagcagcatgaaaacctgacgaggcagcac
caggctcagctccaggagcacatcaagttgcaacaggaacttctagctataaagcagcaa
caggaacttctggagaaggaacagaaattggagcagcagcgtcaggagcaggaggtggag
agacaccggcgggagcagcagcagcttccccctctccgaggcaaggagagagggcgagaa
agagctgtggccagcaccgaggtgaagcagaaacttcaggagttcctgctgagcaagtcg
gccaccaaggactctcccaccaacggaaagaaccattccgtgagccgccaccccaagctc
tggtacacggcggctcaccacacctccctagatcaaagctctccacctttgagcggaacc
tcgccgtcctacaaatacccgctgcctggagcccaagacaccaaggatgacttcccactg
cgcaaaactgcctcagagcccaacttgaaggtgcgatcccgattaaaacagaaagtgaca
gagaggagaagcagccccttactcaggcggaaggatggaaatgttgtcacttcattcaag
aaacgagtgtttgaggtgacagagtcctcggtcagcagcagctctcccggatctggcccc
agctcgcccagcaatgggccttccaccaacatggcagaaagcagtgagacgctgctcatc
ccgcctgctccacacccagagcaaattgtttcccagcagcgtcttctgattcatgaagag
tctatgaatcttctaagcctctatccatccccgtctttgcccaacattactctgggtctc
cctgctgtgccatctcagctcagtgcttcatcttcgatcaaagacaaacagaagtgcgag
gccccagcactgaggccgccgggagttacattgccggggcaatatacgggaagcatcccg
gcatcttcgagtcatccccactctgctctggaaggaaaacccaacagcagccatcaggcg
cttctgcagcacttgttactgaaggagcagatgaggcaacagaagctgcttgtggctggt
ggggttcctctccatcctcagtcccccctggcaacgaaggagagagtatcacctggcctc
cgaggtgcccacaagttacctcgccacaggcccctgaaccgtacccagtctgcccctttg
cctcagagcacgttggcccagttggtcattcagcagcagcaccagcagttcctggagaaa
cagaaacagtaccagcagcaggtccacatgaacaaaccgttcttggaggcccagcccggg
cacgcgctcccgacgtaccaagctccgctggcagccgtgggagcagaagcctttgaccag
cacctactgatctccaggacccgctcgtcccccgcggtccccacggtgcctcgtccagcg
atggatccgagcctccaacgtgcctctgagactggcgtggtgtacgacgctctgatgctg
aaacaccagtgcatctgcggccgctctgcccttcatcccgagcacgctgggagaatccag
agcatctggtcacgtctgcaagaaacggggctcctgagcaagtgtgagaggatccaaggt
cgaaaagcttctctagaagaattgcacctggtccattctgatcatcattctcttctatat
ggcactgaccctttgagcagacagaagctggaccccaggatgctccaagggcccacatct
cagaaggccttctccttgctgccttgtggtggacttggggtggacagtgacaccatttgg
aacgagctgcactcggctgccgctgcacgcatggctgttggctgtgtcatcgagctggct
tccaaagtggtctcaggagagctgaagaatgggtttgctgttgtaaggcccccaggccat
catgctgaagagtcaacagccatggggttctgcttttttaattcggtggcaattactgcc
aaatacttgcgagagcagctcaatgtaggcaagatattgattgtagacctggatgtccac
catgggaacggtacccagcaggctttttacgctgaccccagcatcctgtacatttccctc
catcgctatgatgaaggcaacttcttccccgggagtggagccccaaatgaggttggaagt
ggccttggagagggatataatgtgaatattgcctggacaggtggcctggacccccccatg
ggagatgtggagtaccttgcagcgttcagaactgtcgtgatgcccattgccagagaattt
ggaccagatatagttcttgtttccgcgggctttgatgctgtggaaggccacgcccctcca
ctgggtgggtacaaggtaacagcgaaatgttttgggaatttgacaaggcaactaatgcag
gtggctgatggacatgtagtgatggctctggagggaggacatgatctcactgccatttgt
gatgcatcagaagcctgtgtgaatgccctgctagaaaatgagctggatcctgtcccagaa
gatgttctgcaccaaactccaaatagaaatgccattatttctctacaaaagaccacggaa
attcaaagtaagtactggaagtcagtggagaggttttcaggttgtgctctgactggaact
caggaacaagaacaagaggaaacagagactgtctctgccctggcttctctgtctgtggat
gtggaccagtgctttgctaaggaagacagcagacctgctggcgagcccatggatgaagat
ccagccctgtga
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