Antechinus flavipes (yellow-footed antechinus): 127564377
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Entry
127564377 CDS
T08818
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127564377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afz04515
]
127564377
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afz00537
]
127564377
Cell adhesion molecules [BR:
afz04515
]
Immunoglobulin superfamily
Contactins
127564377
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afz00537
]
Others
127564377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
127564377
NCBI-ProteinID:
XP_051856824
LinkDB
All DBs
Position
5:236626749..236877622
Genome browser
AA seq
1007 aa
AA seq
DB search
MKMWLLISYLITMCFISCLAVAEDGKGFGPIFEEQPIDTIYPEESPDGKVSLNCRARASP
FPVYKWRMNNWDIDLTNERYSMVGGNLVINNPDKLRDAGKYFCLASNIYGMVRSTEATLS
FGYLDPFPPEERVEVKVKEGIGLVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRYVSQ
TNGNLYIANVEESDRGNYSCFVSSPSITKSVFSKFIPLIPLSDRTTKLYPADIKVQFKDT
YALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMSGAVLKIFNIQLEDEGTYECE
AENIRGKDRHQARIYVQAFPEWVEHINDTEADIGSDLYWPCVATGKPIPTIRWLRNGYAY
HKGELRLYGLTFDNAGMYQCIAENAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGGR
VLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNRG
KANNTGTLLITDATRITLPPANADVTVGENATMQCAASHDPALDLTFIWSLNGYVIDFNK
ENSHYMRNFMIDSNGDLLIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVR
IEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDSKTDPPNIEGNMESARAVDL
IPWMEYEFRVIATNILGTGEPSLPSNRIKTEGAAPNVAPSDVGGGGGSNRELTITWVPLS
REYHYGNNFGYIVAFKPFGGKEWKKVTVTNPDIGRYVHKDETMSPSTEFQVKVKAFNNKG
DGPFSLTAVIYSAQDAPSEAPTDISIKVLSSSEISVSWKHVLEKTVEGYQIRYWAAQDKE
AAAQRVQVSSQDYSAKLENLLPDMQYSVEVRAYNSAGYGPPSDVVDVYTKKAPPSQPPRI
ISSVRSGSRYIITWDHVRAMSNESTVTGYKVLYRPDGEHEGKLYSTHKHSIEVPIPRDGE
YIVEVRAHSDGGDGVVSQIKISGASEVSPSFFGLLLPAFGILAFWEF
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtggcttttgattagttacctaattacaatgtgcttcatatcctgtctagca
gttgcagaagatggcaaaggatttggaccaatttttgaagagcaaccaattgataccatt
tatccagaagaatcaccagatggaaaagtatcattgaactgccgggcacgagctagcccc
tttcctgtttacaaatggagaatgaataactgggatattgatctgacaaatgagcgctac
agcatggtaggaggtaacctggtaatcaacaaccctgacaaattgagagatgctggaaag
tatttctgcttagcttcaaatatctatggaatggttagaagcactgaagcaactttaagt
tttgggtatcttgatccttttccgccagaggaacgagtggaggtaaaagtaaaagaaggg
ataggtcttgttcttctgtgtgatcctccttaccactttccagatgatcttagctatcgt
tggcttctaaatgagtttcctgtattcatcacaatggacaaacgacgatatgtgtctcag
accaatggaaatctctatatagcaaatgtagaagaatctgatagaggcaattattcatgc
ttcgtatcaagtccttcaatcacaaaaagtgtatttagcaaatttatcccactcatccct
ctttctgaccgcacaacaaaactctatcctgctgatatcaaagtccagttcaaggacaca
tatgcactgatgggccataatgtaacattagagtgttttgcccttggaaaccctgttcct
gagatccggtggagaaaagttctggaaccaatgccaagtacagctgagataagtatgtct
ggggcagttcttaagattttcaacattcagcttgaagatgaaggcacttatgaatgtgaa
gctgagaacatcagaggaaaagatagacatcaggcaagaatttatgttcaagcatttcct
gaatgggtagaacatatcaatgacactgaagcggatataggcagtgatctatactggcct
tgtgtggctacaggcaaacctatccctacaatcagatggttgagaaatggatatgcgtac
cataaaggtgagctgagactgtatggattgacctttgataatgctggaatgtaccaatgt
atagctgaaaatgcacatggagctatatatgcaaatgcggagctcaagattctggccatg
gctcccacctttgaaatgaatcctatgaagaagaagaccttagcagctaaaggaggacgt
gttttaattgaatgcaagcctaaggctgcacctaaaccaaaattttcatggagtaaagga
acagaatggcttgtcaatagtactcgaattctcatttgggatgatggtagccttgaaatc
agaaacattacaagggctgatgaaggcacttacacatgttttgcagaaaataacagagga
aaagctaataatactggaactctattaattacagatgccacaaggattactttgccccca
gctaatgctgatgtcactgtgggtgagaatgctaccatgcagtgtgctgcatcccatgat
cctgcattggacctcacatttatttggtctttgaatggatatgtgattgattttaacaaa
gaaaatagtcattacatgaggaattttatgatagattccaatggtgatttgcttattaaa
aatgcccagctgaaacatgctggacgttatacttgcactgctcagacaattgtggataat
tcctctgcatcagcagaccttgttgttcgaggcccaccaggtccaccagggggtgtgaga
atagaagacattagagatacttctgttgcactcacatggagccgtggctcagataatcat
agtccaatatctaaatattctattcagaccaaaactattctttctgatgactggaaagat
tctaaaacagatccaccaaatattgaagggaatatggaatcagcaagggcagtagaccta
atcccatggatggagtatgaattccgggtaatagcaaccaatattttgggaacaggagag
cccagtttaccatcaaacagaatcaaaacagagggtgctgcacctaatgtggctccttca
gatgtaggaggaggagggggaagcaaccgtgaattgacaataacatgggtgcctttgtca
cgggaatatcactatggcaataattttgggtacatagtggccttcaagccatttggtgga
aaagagtggaaaaaagtaacagttactaatccagacattggtcggtatgttcataaagat
gaaacaatgtctccttccactgagtttcaagtaaaagtgaaagcctttaacaacaaagga
gatggaccattcagtcttacagcagtcatttattctgcacaagatgcacctagtgaagct
cctacagatataagcataaaagtcctatcttcttctgaaatctctgtttcttggaaacat
gttttagaaaaaacagtggaaggctatcagattcgttactgggctgcacaggataaggaa
gcggctgcacagagagttcaagtcagcagtcaggattattctgccaaactggaaaacttg
ctgcctgatatgcagtattctgtggaggttagggcctataacagtgcaggatatgggccc
cccagtgatgtggttgatgtctatacaaagaaagcacccccaagtcagcctccaaggatt
attagttcagtaaggtctggttcaagatatattatcacctgggatcatgtcagagcaatg
tcaaatgaatctacagtaacaggatataaagtgctctacagacctgatggtgaacatgag
ggcaagttatattcaactcataagcattcaatagaggtcccaatcccaagagatggagag
tatattgtggaggttcgagcacacagtgatggaggagatggagtggtatcacaaattaaa
atttcaggtgcatctgaagtttcgcctagtttctttggcttattgctgcctgcctttggc
atcctagctttttgggaattctga
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