Antechinus flavipes (yellow-footed antechinus): 127564482
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Entry
127564482 CDS
T08818
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04082
Neuroactive ligand signaling
afz04721
Synaptic vesicle cycle
afz04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127564482
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
127564482
04721 Synaptic vesicle cycle
127564482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afz02000
]
127564482
Transporters [BR:
afz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127564482
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127564482
NCBI-ProteinID:
XP_051857000
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Position
5:complement(196013860..196053568)
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AA seq
610 aa
AA seq
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MDGKVVIQEDGPPVVSWGPEGEEKEEEEENIGDRGQWTNKMEFVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYFIFFFTCGIPVFFLETALGQYTSQGSITAWKKICPLFEGIGVAS
VVIEAYLNVYYIIILAWALFYLFSSFTSQLPWTTCTNFWNTEHCVDFLNCSGSSNPELSD
NSTSPVIEFWEKRVLGITTGIHDLGALRWELALCLLLAWIVCYFCIWKGIKTTGKVVYFT
ATFPYLMLIILLIRGVTLPGAYEGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCL
TALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMAQEQGIPISEVAESGPGL
AFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASMDMFPRQLRKSGRRE
FLILFIAVVCYLIGLLLVTEGGMYIFQLFDYYASSGMCLLFLSFFEVICISWVYGADRFY
DNIEDMIGYRPWPLVKICWLFLTPGLCLATFLFSLIKYTPLKYNNVYTYPPWGYSIGWML
ALSSMVCVPLFFIIALLKMQGSFKKRFQQLISPALDLPQPKQCSDGVHSLGYSPSPAKEG
LMTLEKETHL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaaagtggtgatccaggaggatggtcccccagtggtttcttggggccctgaa
ggagaagagaaagaggaggaggaggagaatatcggagatcgtggccaatggactaataag
atggaatttgtgttgtcggtggctggagagatcattggcttaggcaatgtttggaggttc
ccatatctttgctataagaatggaggtggtgccttttttatcccttatttcatcttcttc
ttcacttgtggtatcccagttttcttcctggagacagcattgggtcaatataccagccag
ggcagcataacagcctggaaaaagatctgtcctctatttgagggtattggtgttgcttct
gtagtcattgaagcctatctaaatgtctactacatcattatccttgcctgggctctcttc
tacctgttcagctctttcacctcacagctgccttggacaacttgtaccaatttctggaat
acagaacactgtgtggattttctgaattgttcaggctcaagtaatccagagttatctgac
aatagcacctctccagtcatcgagttctgggagaagagagttctgggcatcaccacgggc
atccatgacctaggggccctgcgatgggagctggccctgtgcctcctgcttgcatggatt
gtgtgctatttctgcatctggaagggaattaagaccacaggaaaggtggtttatttcaca
gccacattcccctatttgatgttgatcattttgctaattcgaggggtcacccttcctggg
gcctatgaagggatcatttattacctgaaaccagacttgtttcgcctcaaggatccccag
gtgtggatggatgcaggcactcagatcttcttctcctttgccatctgtcagggttgcctc
acagccctgggcagctacaacaaatatcacaacaactgttacaaggattgcatcgccctc
tgctttctgaatagtgcaaccagctttgtagctggctttgttgttttctccatcttgggc
ttcatggctcaggagcaggggatacccatttctgaggtagcagaatcaggtcctgggcta
gctttcattgcattccctaaggcagtaaccatgatgcccttatctcaactctggtcatgt
ctcttcttcattatgctgatattcctgggactggatagccagtttgtctgtgtggagtgc
ctggtgacggcctccatggacatgttccccaggcagctacggaagtcagggaggcgagag
ttcctcatcctttttattgctgtcgtgtgctacttgattggactgcttcttgtcaccgag
ggtgggatgtacatatttcaactatttgattattatgcctccagtggaatgtgcttactc
ttcctttcatttttcgaggtgatctgcattagctgggtatatggagctgaccgtttctat
gataatattgaagatatgattggctaccggccatggccactggtgaagatctgctggctc
ttcctaactccaggactttgcctggccacatttctgttctctttgatcaagtacacacca
ctcaaatataataacgtctacacgtacccaccatggggatactcaattggttggatgctg
gcactctcttccatggtctgtgttccactcttcttcattatagccttactgaagatgcaa
ggctctttcaagaagcgctttcaacaacttatctctccagccttggatctgccacagccc
aagcagtgttctgatggtgttcatagcctgggttattcaccttctccagctaaagaggga
ctgatgaccttggagaaggagactcacctgtag
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