Antechinus flavipes (yellow-footed antechinus): 127564493
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Entry
127564493 CDS
T08818
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127564493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127564493
04121 Ubiquitin system [BR:
afz04121
]
127564493
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127564493
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127564493
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127564493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127564493
NCBI-ProteinID:
XP_051857011
LinkDB
All DBs
Position
5:20460359..20545442
Genome browser
AA seq
984 aa
AA seq
DB search
MASLSQPDLQLCPQCKKCGSRARISSASATSPPSSQTSKSAGGGGGAGGGGGPASASSSS
SSSCSSSSSRRLHVLPCLHALCRQCLEAQRHPAAAGGPPGEPLHLRCPICDQKVVLCDSP
GMDALPSSNFLLSNLLDVVAAAEEPPPPKNNGRGVVVVGGGGGGGGGGGGNGGGGSGGSG
GGGNNRHHHHHHHHHHPRAPPPPQPQPPPTAGSPLQPPQPPPSSSSSSSSSSSSSSSQQQ
QPPSSSSSQQPQPPAQHQHRDHPHRDHPHAPRAPSAPSSAPSSSSSSLMLRRPHSQSEAR
CSSCDEGNPASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERFGSPAAAAAAAAAAAVAN
NTAAAAAAQLALSQTFPGSPFSILSVFPERVSYCQQHDDEVLHFYCDTCSVPICRECTMG
RHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQSEV
KAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTISAVQQVLEE
GRAMDVLLARDRMLAQVQELKNVRSLLKPQEDDRVMFTPPDQALYLAIKSLGFVSSGAFA
PLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVMGPDGNLFGADVSDQQ
NGTYLVSYRPQLEGEHLISVMMCNQHIKNSPFKVLVKSGRSYVGIGLPGLAFGSEGDSDG
KLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFYHKFGTLGSRPGQFDRPAGVACDSS
RRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRV
QLFGPDGAFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFL
GSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFICKFGAQGSGFGQMDRP
SGIAVTPDGMIVVVDFGNNRILIF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctttcccagccagatttgcagctctgcccccagtgcaagaagtgcggctcg
cgagctcgcatctcctccgcctcggccacgtcgccgccgtcctcgcagacctccaagtcg
gccgggggcgggggcggggctgggggcgggggcggcccggcctctgcgtcctcctcctcc
tcctcctcctgctcctcctcgtcctcacggaggctgcacgtcctgccctgtctccacgcc
ttgtgccgccagtgtctggaggcgcagagacacccggcggcggcgggcgggccgcccggg
gagcccctccacttgcgctgccccatctgcgaccagaaagtggtgctctgcgactcgccg
ggcatggacgcgctgccctcctccaacttcctcctgagcaacctgctggacgtggtggcg
gcggccgaggagccgccgccgcccaagaacaacggccgcggggtggtggtggtgggcggc
ggcggaggaggcggcggcggaggcggcggcaacggaggcggcggtagcggcggcagcggc
ggcggcggcaacaaccgccatcaccaccatcaccatcaccaccaccacccccgtgcgccc
ccgccgccgcagccgcagccgccgcccacggccggctctccgctgcagccgccgcagccg
ccgccctcctcctcctcctcttcttcttcctcctcttcttcctcctcctcgcagcagcag
cagccgccttcttcctcctcctcccagcagccgcagccgccggcccagcaccagcaccgg
gatcacccgcaccgcgaccacccgcacgcgccccgcgccccgtccgccccgtcctccgcc
ccttcctcgtcctcgtcctcgctgatgctccggcggccgcacagccaaagcgaggcgcgc
tgcagctcgtgcgacgagggcaacccggccagctcgcgctgcctcgactgccaggagcac
ctgtgcgacaactgcgtccgcgcgcaccagcgggtgcgcctcaccaaggaccactacatc
gagcgcttcggcagcccggcagccgccgccgccgctgccgccgccgccgccgtggccaac
aacacggcggcggcggcggcggcgcagctcgcgctcagccagaccttccccggctcgccc
ttctccatcctctccgtgttccccgagcgggtcagttactgccagcagcacgacgacgag
gtgcttcatttctactgtgacacctgctccgtgcccatctgccgagagtgcaccatgggg
cgccacgtcggccacagcttcatctacctccaggacgccctgcaagactcccgaaccctc
accattcagctgctggccgacgctcagcaaggtcgccaggccattcagctgagcatcgag
caggcccaggctgtggcggagcaggtggaaatgaaagcgaaggtggtccagtcggaagtc
aaggcggtcaccacgaggcacaagaaggccttggaggagagggagtgtgagctgctgtgg
aaggtggagaagatccgccaggtcaaggccaagtctctgtacctgcaggtggaaaagctt
cgtcagaacctcaacaagctggacagcaccatcagcgccgtgcagcaggtcctggaagag
gggcgcgccatggacgtgctgctggcccgagaccgcatgctggcgcaggtccaggagctc
aagaacgtccggagcctcctcaagccgcaggaagacgacagggtgatgttcacccccccg
gaccaggccctctacctggccatcaaatccttaggcttcgtcagcagcggggcttttgcc
cccctgaccaaggccaccggggaaggcctcaaacgcgccctccagggcaaggtggcgtcg
ttcacggtgatcgggtacgatcacgacggggagccgcgcctctcgggcggcgacctgatg
tccgcggtggtcatggggcccgacgggaacctgttcggcgccgacgtcagcgatcagcag
aacggcacctacctggtcagctaccggccgcagctggagggcgagcacctcatttccgtt
atgatgtgcaaccagcacatcaagaacagccccttcaaggtgctggtcaagtccgggcgc
agttacgtgggcatcgggctgcccgggctggccttcggcagcgagggcgacagcgacggg
aagctctgccgcccgtggggcgtcagcgtggacaaggaaggctacatcatcgtggccgac
cgcagcaacaaccgcatccaggtgttcaagccctgcggcaccttctatcacaagttcggc
acgctgggctccaggcccggccagttcgaccgcccggcgggagtggcttgcgactcctcg
cgcaggatcgtggtggcggacaaggacaatcatcgcatccagatattcaccttcgaaggg
cagttcctcctcaagttcggggagaagggcacgaagaacggacagttcaactatccttgg
gacgtggcggtgaattcggaaggcaagattctggtctctgatacacggaaccaccgggtc
cagctgttcgggcccgatggggccttcctgaacaagtacggctttgaaggggccctctgg
aagcactttgattccccccggggtgtgaccttcaaccacgaaggccatctggtggtgacg
gacttcaacaaccaccgcctgctggtcatccacccagactgccagtctgcacgcttcctg
gggtcggagggcaccggcaacgggcagttcctgcgcccccagggggtcgccgtggatcaa
gagggacgaatcatcgtggcggattccaggaatcatcgggtgcagatcttcgaatccaac
ggcagtttcatatgcaaatttggtgctcagggaagtggctttggccaaatggaccgcccc
tcgggcattgccgtcactccagatggcatgatcgtcgtggttgattttggaaacaatcgg
atcctcatcttttaa
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integrated database retrieval system
