Antechinus flavipes (yellow-footed antechinus): 127564640
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Entry
127564640 CDS
T08818
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
127564640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afz04812
]
127564640
Cytoskeleton proteins [BR:
afz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
127564640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
127564640
NCBI-ProteinID:
XP_051857300
LinkDB
All DBs
Position
5:complement(108592442..108827158)
Genome browser
AA seq
742 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQREEEESLG
QVTEKVEVNAQNSVGDEETKTSTLSNTQVEGSDDAAFLERLARREERRQKRLQEALERQK
EFDPTITDESLSLPNRRAQNDAAENETSEKEEKNEIRQERYKLEETETITKSYQKNDWRE
PEENKKEEKEKEEEEEKPKQRIIEENQVEVIVEKKTEAQEEKVVTELENGQVYAEEPKTE
RERTVDTEEFTGNEKAEEQDQAEAEKLRLEAEERERIKAEQEQRAEEERMRLEAEERLAA
QEKERKEAEERERIKEKERQAAEERERAKAEEKRIAEEKAKLEEQMVKKQLEEKRGKATD
KQIQGGKGEEKIQDNKLQPAGLKTQGEEKGVKVEVKKEKSQEEKTTFKREEIKEEKINKD
KGPKEEIKSNWDRKKGFPEAKSQNGELSTHKLKHTENTFSRSGGKGSADVKETEATSQVE
AGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRKKQEEA
ERKVREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEERAE
FLNKSVQKSSGAKLSHPTAVVSKIDSRLEQYTSAIEGTKTSKPSKAAASDLPVPAEGVRN
IKSMWEKGNVFASPTGTGTPNKETAGLKVGVSSRINEWLTKTPEGNKSPAPKPSDLRPGD
VSSKRNLWEKQSVDKVTSPTKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttcgagcgccgcagagaacttaggaggcaaaaacgcgaggaaatgcgcctt
gaagcagaaagaatagcctatcagagaaatgatgatgatgaagaagaggctgctagagaa
cgtcgtcgcagagcccgtcaagagaggcttcgtcaaagggaagaggaggagtctttagga
caagtgactgaaaaggtggaggttaatgcccagaacagtgtgggtgatgaagagactaaa
accagcaccttatccaacacccaagtagaaggaagcgatgatgctgcattcttggagagg
ctggcccgtcgggaagaacgtcgccaaaagcgcctccaggaagccttggagcgccagaag
gagtttgacccaacaataacagatgaaagtttgtcactacccaacagaagagctcaaaat
gatgctgcagaaaatgagacttctgagaaagaagagaaaaatgaaatccgccaagaaaga
tataaactagaggaaactgaaacaatcaccaagtcctaccagaagaatgattggagggaa
cctgaagaaaacaagaaagaagaaaaggagaaggaagaggaggaagagaagcccaagcag
agaatcattgaagaaaatcaggtagaggtgatagtagaaaagaaaaccgaagcccaagag
gaaaaggtagtaacagaattggaaaatggtcaggtctatgcagaagaacccaaaacagaa
agggagaggacagtagatacagaggagtttacaggtaatgaaaaagcagaggagcaagac
caggctgaggcagagaagctcaggttggaggctgaggaaagggaacggatcaaggctgaa
caagaacagagagctgaagaagagaggatgagacttgaggcagaggaaagactggctgcc
caagaaaaggaaaggaaggaggcagaggaaagggaaaggattaaggaaaaagagaggcaa
gcagcagaggaaagggaacgggcaaaagcagaggagaaacgcatagctgaagagaaagct
aagctagaagagcaaatggttaaaaagcagttagaagaaaaaagaggcaaagcaacagat
aagcagattcaggggggaaaaggagaagagaaaatacaagataacaaacttcagccagct
ggcctaaaaactcagggagaagaaaaaggggtcaaagtggaagttaaaaaagaaaaatcc
caagaagaaaagacgactttcaaaagggaggagatcaaagaagaaaagatcaacaaggac
aagggacccaaagaggaaattaaaagcaattgggatcgcaagaaagggtttccagaagcc
aaatctcagaatggagaactttcaactcataaacttaaacacacagagaatactttcagc
cgaagtggtgggaaagggagcgcggatgtcaaggagactgaggcaacatcccaagtggag
gctggcaagagactggaggagctgcgccgccgcaggggagagacggagagtgaagagttt
gagaaactaaaacagaagcagcaggaggctgccttagagcttgaagagttaaagaagaag
cgggaagagcgcagaaaggttctagaggaggaggagcagaggaagaagcaagaggaggct
gagagaaaagtcagagaggaggaggaaaagaggaggctgaaggaagagattgaaagacga
agggcagaggctgctgaaaaacgccagaaaatgccagaagatggtctatcagatgacaag
aaaccatttaagtgtttcactcctaaaggctcatctctcaagatagaagagcgggcagaa
tttttgaataaatccgtccagaaaagcagtggtgccaagttaagtcaccctacagcagtt
gtctccaagattgacagcagactagagcaatacactagtgcaattgagggcacaaagact
tccaaaccatctaaggcagcagcctcagatctaccagttcctgctgaaggggtccgtaac
attaaaagcatgtgggagaaaggaaatgtgtttgcctcccctactgggacaggcacacca
aacaaggaaaccgctggcttgaaagtgggagtttccagccgcatcaacgaatggctaact
aaaaccccagaagggaacaagtcgcctgctcctaagccctcggacttaaggccaggtgat
gtatcaagcaagcgcaatctctgggaaaagcaatctgtggataaggtcacttcacccact
aaggtttga
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