Antechinus flavipes (yellow-footed antechinus): 127564918
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Entry
127564918 CDS
T08818
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03082
ATP-dependent chromatin remodeling
afz05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127564918
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127564918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127564918
03021 Transcription machinery [BR:
afz03021
]
127564918
03036 Chromosome and associated proteins [BR:
afz03036
]
127564918
Transcription factors [BR:
afz03000
]
Eukaryotic type
Helix-turn-helix
ARID
127564918
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127564918
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
127564918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
127564918
NCBI-ProteinID:
XP_051857727
LinkDB
All DBs
Position
5:complement(201939970..202138507)
Genome browser
AA seq
1838 aa
AA seq
DB search
MANSTGKAPPDQRRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDKNKSQENTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPEALTAVKLVEHQSSNHQVLSE
IRPQAVEHVQSQNHVAAVPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNSDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPNNNGQAHIHVVGVK
RRAIPLPIQMYYQQQSTSTPVVRVESVPDVSPTPSPAGIPHGPQTIGNHFQRTPVNSQSS
NLTATQMSFPIQGVHTVAQTVSRIPPNPSVHTQQQQNATVTVIQNKAPISCEVVKAAVIQ
STIPPTAVPGSIAVGGGAAQASLVQNHTAGPQPVTVVSSQTLLHHPPVIQQQSPLHAVVP
GQISSGTPVTVIQQAVPQSHIFGRVQNLPACPSTVSQGQQLITTSSQPVQTSSQPSSSSN
QQQDTVIITPPQYVTTSASNIVSATSVQSFQVAAGQMVTIAGVPSPQTSRVGFQNIAPKP
LPSQQVTSTVVQQPIQQSQQQTQQSVVIVSQPAQQGQTYAPAIHQIVLANPTTIPANQTV
QLPGQPNLTPSSSPSPGPVTNSQVPTVMSSPPSTPQSQGPPPTVSQMLSVKRQQQQQHSP
ASQPQQVQVQVQQPQQVQMQVQPQQTSTGVGQPASGESSLIKQLLLPKRGPSTPGGKLIL
PAPQIPPPNNARAPSPQVVYQVTNNQTSGFGVQGQSQGQQLLVGQQNVQLVQSAIPPPGG
VQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQIIAPA
GITMSGTQTGVGLQVQTLPATQAPPAGQSPCATAAAPPFKGDKIICQKEEEAKEATGLHV
HERKIEVMENPSCRKGVANTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKSQNETTQ
GSQISNGPSLDLGENGAPGKQNLEQMDTQEFKSDLKKPLVNGICDFDKGDGSHLSKNIPN
HKTSNHVGNGEISPVEQGNLDATQQDTAKGDQIERISNGPVLTLGGSPSVSSIQEATNVI
TQQLSGTNTDLPNGPLASSLSSDVPQQRPSVVVSPHTAASVIQGHPIIAVPHSGSRSSQS
PLSSEVRSTNGTAECKTVKRPAEDIDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVP
AGADPSTVAKVAIESAVHQKQQHPSSYVQNIATQSTPVTPVPTVQVQGQHNSSQPSPFST
SSQHGEQMKKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQR
QRFSFITHLQDKHCSKDALLAGLKQDEPGQMGNQKPSNKQPTAGGTTSTPRTQKAIVNHP
SAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNL
SVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgactgggaaggcgccgccggaccagcggagaaagggacttgctttcctg
gacgagctgcggcagttccaccacagcagagggtctccttttaagaagatccctgctgtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgaaaagaatcagtggggagaaattgtagaagagtttaactttcccaga
agttgttctaatgctgcctttgctttaaaacagtattacttacgttatttagaaaagtac
gagaaagttcatcactttggggaggatgatgatgaggtaccgccaggcaatccaaagcct
caacttcctattggtgcaattccatcttcctataattaccagcagcacagtgtgtcagat
tatcttcgtcaaagctatgggctatctatggacttcaattcgccaaatgattataataaa
ttggtgctttccctgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actcttctgtcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgctggggtgtttgacgacactttaggatcattttctactgta
tttggagaagaatggaaggagaaaactgatagagattttgttaagttttggaaagatatt
gtagacgataatgaagtacgagatctcatttctgacaaaaacaaatctcaagaaaataca
tctggagaatggatttgggaatctttatttcatccacctcgcaagctgggcattaatgat
attgaaggacagcgagtacttcagatagcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaaacttttggcagctaatcgtacttgtcttcgtttcttattactttctgct
catagtcattttatttctttaaggcaattgggacttgatacattaggaaatattgcagca
gagcttcttttggatcctgttgatttcaaaactactcatctaatgtttcatactgttaca
aaatgcttaatgtcaagagatagatttttaaaaatgagaggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttaatctgtgaatatgttgatcaggaatcttac
aaagagatcatttgtcatctcactttgcctgatgtactacttgtaatttcaactcttgag
gtgctatatatgctcacagaaatgggagatgttgcttgtacaaaaattgcaaaagtggaa
aaaagcatagatatgttagtatgtctagtttccatggatatccaaatgtttggacctgaa
gcactaactgcagtaaaacttgttgaacatcaaagctctaaccaccaagttttatcagaa
attaggccacaggcagtagaacatgttcaatcccagaaccatgtagcagctgtcccagct
tccagagcagttgtagcacagcatgttgctccaccaccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggttgaatgcacattttgaagtgaattcagattgttcagtc
tcccgagcagaaatgtactctgaatatctttcaacctgtagtaaattagcccgtggtgga
atcctgacatcaactggattttataaatgtcttcgaacggtctttccgaatcatacagtg
aagagagtggaggatccaaataacaatgggcaggcacatatacatgtagtaggggtaaaa
cggagggcaataccacttcccattcagatgtactatcagcagcaatcaacttctacacct
gtggttcgtgttgagtctgttccagatgtgtctccaactccttcaccagcaggaatccca
catggaccacaaactataggaaatcattttcagcggactcctgttaatagccagtcttca
aatttgactgcaacacaaatgtcttttccaatccaaggtgttcatactgtggcacagact
gtttctagaattccaccaaatccttcggttcatacccagcagcaacaaaacgctacagtg
actgtgatacaaaataaagctccaatttcttgtgaagtagttaaggctgcagtaattcag
agtactattccaccaacggcagttcctggtagtattgctgttggagggggagctgcacag
gcctcccttgttcagaatcatactgcaggaccacagccggtgactgttgtcagctctcaa
acattgcttcatcatcctcctgtcatccagcagcaatccccactacatgcagtagtccca
ggacaaatctcctcaggcactcctgttacagtaattcagcaagctgtaccacagagccat
atatttggcagagtacagaacttaccagcatgcccttcaacagtttcacaaggtcaacag
ttaatcacgacatcatcccaacctgtgcaaacttcatctcagccatcatcttctagtaac
cagcaacaagacactgtcatcatcacgcccccgcaatatgtaacaacttcagcatctaat
atcgtttctgctacttcagtacagagttttcaagtagcagctggccaaatggttacaata
gctggagtcccaagtccacagacctccagggtaggatttcagaacattgcgcccaagccc
ctcccctctcagcaagttacatccacagtagtacagcagcctatccagcagtcccaacag
caaacccaacagagcgtagtgatcgtgagccagccagctcaacaaggtcagacatatgca
ccagccattcaccaaattgtcctcgctaatccaactacgatcccagctaatcaaacggtc
cagctacctggacagccaaacttaactccatcttcctcaccgtcacctggacctgttaca
aatagccaagttccgactgttatgtcatctccgccttctactcctcaatcacaggggcct
cctccaactgtcagtcagatgctatctgtgaaaaggcagcaacagcagcaacattcacca
gcatctcaaccacagcaggtacaagtccaagttcagcagccacaacaggtacaaatgcaa
gttcagccacagcaaactagcacaggagttggtcagcctgcttctggtgaatctagtctg
ataaaacagttattacttccaaagagaggtccttccaccccaggtggtaaactgatactc
ccagctccacagattcctcctcctaataatgcaagagcccctagccctcaggtggtttat
caggtgaccaataaccaaacatccggttttggagtgcaaggacagtctcaaggtcagcag
ctattggttgggcagcaaaatgttcagctggtccaaagtgcaatccccccaccaggggga
gtacagacagtacctatctctaacttacaaatattgccaggcccactgatctcaaatagt
ccagcaactatctttcaagggacttctggcaaccaggttaccataacagttgtgccaaat
actagttttgctactgcaactgtgagtcagggaaatgcaactcagatcattgctccagca
ggaattaccatgagtggaacacaaacaggagttggacttcaggtgcaaacacttccagct
actcaagcacctccagctggacaatcaccatgtgctactgctgctgctcccccattcaaa
ggtgataaaataatttgccaaaaggaggaggaagcaaaggaagcaacaggtttacatgtt
cacgaacgtaaaatagaagtcatggaaaacccatcctgtcgaaaaggagttgcaaacacc
agcaatggggatacaaaagaaaatgaaatgcaggtgggaagtcttttaaatggaagaaag
tatagtgactcaagtctacctccttcaaactcagggaaaagtcaaaatgagaccacccag
ggctcacagatcagtaatgggccttcattagatttgggtgagaatggagctcctggaaag
cagaacttggaacagatggatacacaagaattcaaaagtgatttgaagaaacccctagtt
aatggaatctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaat
cacaaaacttccaatcatgtgggaaatggtgagatatctccagtggaacaaggaaattta
gatgccactcagcaagatactgccaaaggtgatcaaatagaaagaatttccaatggacct
gtattaactttgggtgggtcaccatctgtaagcagtatacaggaggccacaaatgtgata
acacagcaacttagtggtaccaacactgatttgcctaatggacctttagcttcaagtttg
agttcagatgtgcctcagcaacgcccaagtgtagttgtctcaccacatactgcagcctct
gttatacagggacatccaatcatagcagtaccccactcaggatctagatcatcccagtct
cccttatcatctgaagttcggtctactaatggcacagcagaatgcaaaactgtaaagagg
ccagcagaggatattgatagggaaacggtcccaggaattccaaataaagtaggagttaga
attgttacaatcagtgaccccaataatgctggctgtagtgcaacaatggttgcagtacca
gcaggagcggatccaagcactgtagctaaagtagcaatagaaagtgctgttcaccaaaag
cagcagcatccatcatcatatgtacagaacatagccacgcagagcacacctgtgacacca
gtaccaactgttcaagtacagggccagcataacagttctcagccatctccattcagtaca
tccagtcaacatggggaacaaatgaaaaaacctggacaaaacttcatgtgtctgtggcag
tcttgtaaaaagtggtttcaaacaccatcacaggttttttaccatgcagcaacagaacac
ggaggaaaagatgtatatccagggcagtgcttatgggaaggttgtgagccctttcagcgt
cagaggttttcctttatcacccacttacaggataagcattgctcaaaggatgctctgctt
gcaggattaaaacaagatgaaccaggacaaatgggaaatcaaaaaccttccaacaaacag
ccaactgcagggggtacaacctcaactcctagaacacaaaaggccattgtgaatcatccc
agtgctgccctcatggcacttaggaggggatcaagaaaccttgtctttagagatttcaca
gatgaaaaagagggaccaataactaaacacattcgactaactgctgccttaatattaaaa
aatattggtaaatattcagaatgcggtcgaagattacttaagagacatgaaaacaaccta
tcagtgctagccattagtaacatggaagcttcctctacacttgccaaatgcctttatgaa
cttaattttacagttcaaagtaaagaacaagaaaaagactcagaaatgctgcagtga
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integrated database retrieval system
