Antechinus flavipes (yellow-footed antechinus): 127564928
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Entry
127564928 CDS
T08818
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afz03009
]
127564928
Ribosome biogenesis [BR:
afz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127564928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
127564928
NCBI-ProteinID:
XP_051857733
LinkDB
All DBs
Position
5:275150515..275243285
Genome browser
AA seq
2868 aa
AA seq
DB search
MKPKPFAHKTENTYRFLTFAERLGNVNIDIIHRIDRTACYDEEVETYFYEGLQKWRELNL
TEHFGKFYKEVVGKCQSFNQLVYHQKEIVLSLKSHLQIKHSLAYQPLLDLVVQLARDLQT
DFYPNFKDFFLAITAILETQDTELLEWAFTALSYLYKYLWRLMVKDMPNIYSLYSTLLAH
HKSHIRNFAAESFTFLMRKAPCVLASRSRLCVPWCRTPHSPFSMSPGPLQVSDEDTLFNL
MFLDLGKYPTKAEGVGQLLFEMCKGVRNMFHSCTSKAVRAILKKLGPVTETEAQLPWHLV
AEALRQMVRASAAYVYKDHFGVFWECLQEALLELQDRVSKAPSSDGSDQMERLLQVYLIL
VRHASGSKIGQPEAICTTILQTLDIPDLSTSCRKVLLEVIAALVLGENVSLPETLVRKSV
EKTFASGFERRLIFDFSGGMFSMKQFEQIFLPTLLEYVENCFLADEAAAKEEALAILAKL
ILNKAPPPTMGSMAIEKYPLTFKAKSLAPRTRQKRTKTGAESEQLLVLGHVLSQIQLPPS
AETGSLSHLWAALVVLPHLRPMEREKIVPLVTELIDSFFAASSSPESVGKEELFVLCQAV
NTLLSLEESSEILQLVPVERVKKLLETFPAEPSVLLLADLYYQRLSLLGCSEPLAEETLM
SLFVSLQPNISAGVSKIRLLTIRILNHFKVQLPEAMEVDGIGEHQSIFATLLQSELVPAT
VNDYREKLLHLRKLRHDLVQASIPDGPLHEVPLRYLLSMLYINFSVLWDPVIELIASYAN
EMENKMFWKVYYEHLEKAATRAEKELQNDFRDKRLRSKVVEKTKMGDVDTLYHEQLEQRT
DCRERLDHTNFRFLLWKALAKFPERVEPRSRELSPLFLRFISNEYYPADHQVAPTQDLLK
KGDAASEEEKEEGAAAEGNEGAANGEELPDETVVLGFQKKKTRRAAAKQLIAHLQVFSKF
SNPRSLYLESQLYELYLQLLLHPEQDVQKMALECIMTYKHPHILPYKENLQRLLEDKSFK
EEIVHFSISEENTIVKTAHRADLFSVLLRILYGRMKNKTGSKTQGKSASGTRMSIVLRFL
AGSSSEEVHMFLDLLFEPVKHFKNGPCHSAVLRAVEDLDLSRVIPLGRQHGVFNSLELVL
KNIGHLASPYLSEILQILLCMTATVSHALQQREKIQLRVINPLKHLRRLGLKLIDEFFSE
QETYNFSTDEIDAVFQGAIWPQITRLASESQYSPTLLLKLIHTWSKNPRYFPLLAKQKPG
EPEYDILSNVFAVLSAKIMSEVTASVVMDIADNLLNTPDFEPTDTVSELSVTGCVYTEIT
ENVDESITVGGRLMLPQVPAILKYLSRTMVNVEKVRKKKYRAQVSKELSILSRISKFMKD
KEQSSVLITLLLPFLHRSNIVEDTEIDILVTIQNLLKNCLEPTSFLKPLSRLFSVIQSKM
SRQMLCTVFKTLSDYDSRLEYITEVVKLNAFDQRHLDDINFDVRLSAFQKITSRIKEMET
VDIAFLIPVMHNCFYTLQLKDMALSDSASLCLTTIIHRLAAADVTEAQYREVIQRTLLET
LRKGLKNPAESIQQEYTTLLSCLIQTFPNHPEFKDLVQLSDFNDPEMDFFENMKHIQIHR
RARALKKLGKRLTEGKFVLSSKSLQNYIMPYATTPIFDEKMLKHENITTASMELIGAICR
HLTWPGYMYYLKFFIHVLHTGQINQKLGVSLLVIVLEAFHFDHETLEKQMEKIQSEENAM
EVDVPTEQEPMEVDPPSEEGKKEEEEEKGPRPCEAGESLPGPAPEISAPEISAPETSAPE
TSAPETSAPETSAPEISAPETSAPEPEEGLQVLPGLPKSKQELECLVKQIHKTINSSVLP
KLHKCLSATTKREEEHKLIKSKVVNDEEIVRIPLAFAMVKLMQSLPQEVMEANLPSILLK
VCTLLRNRAQEIRDVARNTLTKIIETLGVHYLQYILKELQSTLVRGYQVHVLTFTVYILL
KGLANSLKVGELDPCLDIMIGIFNHELFGSVAEEKEVKGIISKVMEARRSKSYDSYEILG
RFVGKDQVTKLILPLKEILQNTTSLKLARKVHEALRRIVAGLIVNAGMTAECVLLLGHGL
ISENLPLLTEKERSQAEPLPDPRLPPQSCLLLPPTPSRGGPKAAVSRRTNMHILVEAGLR
LLHMSLKRSKVNSSDERVLEMLDPFTSLLIDCLKSRDAKVITGALQSLIWVLKFPLPSVT
KNSEKLTKQLFLLLKDYARLGAARGQNFHLVVNCFKCMTFLVKKVKCHKITERQLQVLLA
YAEEDIYDSSRQATAFGLLKAILSRKLMVPEIDDVMKKVSQFAITGQSEPVRVQCRQVYL
KYLLDYPIGTKLKSNLEFMLAQLNYDYEAGRESALEMIAHLFETFPQGLLHENCGLFFVP
LCLMMINDNSAKCKRMASMAIKLLLTKVSLEDKDLMYVLVAKWFGSQKSLQKRLAAQTCG
LFVEAEGPAFERRFATVLPVIERELEPSQLRDLIEETDEKASDRLLFGFLILITKLIKES
NFLQLTKYPESLNNIWSHIQTHLSHPHSWVWLTSAQIFGLLFASCKPEDLIKRWAAQQSK
KKQSGPVAINFLTKDLDHKMKRLALAFCFQLQSKFLDMSLGEQIVKNLLFVAKVIYLLVL
HAAEKEQAPEETGEAAAPETSQAASSEEGAGRSEEAPDNENEAAGSAEKAGAEEELGRPA
NLFWLIHKLSVMAKREAAYSPKNPLKRTCIFKFLGALALDLGPDKVRPFLPMILAPLFRE
LNSTYSEQDPSLKNLSQEILELLKKMVGLEAFSLAFASVQKRARDKRALRLRRKAMQFVT
NPDIAAKKKMKKHKNKSEAKKRKIEFLRPGYKAKRPRSQGLRDLAMVE
NT seq
8607 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaaccctttgcccacaaaacggagaacacgtatcggtttcttacgtttgct
gagcgacttgggaatgttaatattgatatcatccatcggattgataggactgcctgttat
gatgaggaggtggaaacctatttttatgaaggactacagaaatggagagaattgaatctc
accgaacattttgggaaattttacaaagaagttgtcggcaagtgccagtcattcaatcag
ctggtttaccatcagaaggagattgtcctgagcttaaagtcccacctgcagatcaagcac
agcctggcctatcagccacttttggacctggttgttcagttggctcgggatctgcagact
gacttctatccaaattttaaagattttttcctggccatcacagcgattctagagacccag
gacaccgagctgttagaatgggcttttacggccctctcttacctttacaagtacctctgg
agacttatggtcaaggacatgccaaacatatacagtttatacagtacactcctggctcac
cacaaatcacatataagaaattttgcagcagaaagttttacctttttgatgagaaaggcc
ccttgtgtccttgcctcccgcagtaggctttgtgtaccctggtgcaggacacctcattcc
cctttctctatgagtcctggacccctccaggtttcggatgaagacaccctctttaattta
atgtttcttgaccttggcaaatatcccacaaaagcggaaggtgttggacagttacttttt
gaaatgtgcaaaggagttagaaatatgttccactcctgtacatccaaggcagtccgggca
atcctgaagaagctgggcccagttacagagaccgaagcacagctgccctggcacctggtg
gccgaggcgctcaggcagatggtcagggcgtcggctgcctatgtctacaaggaccacttt
ggcgtgttttgggagtgcttgcaggaagcgctcctggagctccaggacagagtgtccaag
gccccctcctcagacggttcagaccagatggagaggctgctgcaggtctacctcatcctg
gtgagacacgccagcggctccaaaatcgggcagcccgaagcaatctgcacgaccatactg
caaaccttggacatccccgatctctccacttcttgccgtaaggtcctcctcgaggtgatt
gccgcgttagtcttgggtgagaatgtttccttgccagagaccctcgtccggaaaagcgtg
gaaaagacttttgcaagcggctttgaaagacgtctgatttttgatttctccggagggatg
ttctccatgaagcagtttgagcagattttcctgcccactttgttggagtatgtggagaac
tgcttcctggccgatgaggcggctgccaaggaggaggccttggccatcctggcgaagctc
attctgaacaaagccccgccgcccaccatgggctccatggccattgaaaagtaccccctg
actttcaaggcgaagtccttggcaccccgtacgagacagaagaggaccaagaccggcgca
gagtcggagcagctgctggtgttgggccacgtcctctcccaaatccagctcccgcccagc
gcggagacgggctctctttcccacctgtgggcggcgctcgtggtgctgccccatcttcga
cccatggagagagagaagatagtgcctctggtcacagaactcatagactccttctttgcg
gccagcagcagcccagagagcgttggtaaagaggagttattcgtcctgtgccaggcagta
aatactctgctaagtttagaagagtcttctgaaattctccagttggttcctgtggaacga
gtgaagaaactgttggagaccttccccgcggagccctccgtgctgctgctggccgacctc
tactaccagcgactgtcgctcctcggctgttcggagcctctggcggaggagactttgatg
agcctgtttgtcagtctgcaaccaaacatctcggctggcgtgtccaagattcgacttttg
acgataagaatcctgaatcactttaaggtccagcttcccgaggcgatggaggttgatggg
ataggggagcaccagtctatctttgctaccttgctgcaatctgaacttgtcccagcaact
gtgaacgattaccgagagaagcttttgcatttgagaaaactgagacatgacttggtccag
gcgtccatccctgacggacctttacatgaggtcccgctccggtacctgctcagcatgctg
tatattaacttcagcgttctctgggatcccgtcattgaactcatcgcttcttatgccaat
gagatggaaaacaaaatgttttggaaagtctactatgaacatttggagaaagccgctaca
cgtgctgagaaggaactacagaatgacttcagagataaacgtcttcgcagtaaagttgtc
gagaagaccaagatgggagatgtggacaccctttatcacgaacagctggaacaaagaacc
gattgtcgggagaggctggaccacaccaactttcgctttttgctctggaaggccctggcg
aaattcccagagagagttgagccccggtcccgggaactctcccctcttttcctgagattt
attagtaatgagtattatccagcagaccatcaagtggccccaactcaggatctcctcaag
aaaggggatgcagcctctgaagaggaaaaagaggagggggctgctgccgagggcaacgag
ggagctgcaaatggggaggagctgcccgatgagactgtggtactgggcttccagaagaag
aagaccaggagagccgcagccaagcaattaattgctcatctgcaggttttctctaaattt
tcaaatcctcggtccttatatctggagtcccagctgtatgaactgtatctgcagttactg
ttgcatcctgaacaagatgtgcaaaaaatggccctggagtgtatcatgacctacaagcac
ccccacattctgccttacaaggagaatttgcagaggttgttggaagacaagagctttaaa
gaagaaattgtccattttagcatttccgaggagaatacaattgtgaaaacagctcacaga
gccgatcttttttcagtgcttctgagaattctttatggacgaatgaaaaacaagactggg
agtaagactcagggcaagtcggcctcggggacgcgcatgtcgattgtcttgcggttcctc
gcggggtcttcgtccgaagaggtccacatgttcttagacctgctctttgagcccgtgaag
cacttcaaaaacgggccctgccactctgcggtcctgcgagctgtggaggacctggatctg
tccagggtcatccccttgggccgtcagcacggtgtcttcaacagcctggagctggtctta
aagaacatcggtcacctggccagcccctacctgtcggagatcctgcagatcctgctctgc
atgacggcgaccgtgtcccacgcccttcagcagagggagaagatacaactgagggtcatt
aatcccctaaaacatctgaggcgtctcggactcaagctgatagatgagtttttttccgag
caggaaacttacaacttcagcactgatgaaatcgatgctgttttccaaggtgccatttgg
cctcagatcaccagacttgcatctgagagccagtattcaccaactcttctgctgaaactt
attcatacttggagtaaaaaccccagatacttccctttgctggctaaacagaaacctggg
gagccagagtacgacatcctcagtaatgtgtttgccgttctctcggccaagatcatgtct
gaagtcacagccagtgtcgtgatggatatagctgacaacctccttaatacgccagatttt
gaacccacagacacagtatcagagctgagtgtgactggatgtgtttatacagagataaca
gaaaatgtggacgagtccatcactgtgggcggaaggctgatgctgccccaggtgcctgcc
atccttaagtacctcagcaggaccatggtcaatgtggagaaggtgaggaagaagaagtac
cgggcccaggtcagcaaggagctcagcatcctttccaggatcagcaagtttatgaaagac
aaggagcagagctccgtcctcatcaccctcctcctccctttcttgcatcgcagcaacatt
gtcgaggacactgagattgatatcctggtgaccatacagaacttgttaaagaattgtctg
gagccaacgagtttcctgaagcccttgtcaaggcttttctctgtcattcaaagcaaaatg
tcccgacagatgctctgtacagtttttaagacactttctgattatgacagtagattggag
tacattacagaagtggtcaagctgaatgcttttgatcagagacacctggatgacatcaac
tttgacgttcgcttgtcagctttccagaaaattacttctcgcatcaaagagatggaaact
gtagacatcgccttcttaattcctgtgatgcacaattgtttctacacattacagctgaag
gacatggccctgagtgacagcgccagcctgtgcttgaccaccatcatccaccggctggcg
gccgcggacgtcacggaggcccagtaccgagaagtcattcagcgcacgctcttggagacc
ctgaggaaaggcctcaagaacccagccgagagtatccagcaggaatacaccactttactt
tcctgtttaattcaaacctttccaaaccacccagaatttaaagacttggttcagctgagt
gacttcaatgatcctgaaatggacttttttgagaacatgaaacacattcagatccacagg
agagccagagccttgaagaaacttggcaaacgcctgacagagggcaagtttgttctgtcg
tccaagtccctccagaactacatcatgccctacgccacgacgccgatttttgatgagaaa
atgcttaagcatgaaaacataacaaccgcttccatggagcttattggagctatttgcagg
caccttacctggccaggatatatgtattacttgaaatttttcattcatgtcttacacaca
ggacagatcaatcaaaagttgggcgtcagcttgttagtcatagtactagaagctttccac
tttgaccatgaaactcttgagaaacaaatggaaaaaattcagagtgaagaaaatgccatg
gaggtggatgtgcccaccgagcaggagcccatggaggtggatccccccagcgaagagggg
aagaaggaagaggaagaagagaaggggccgcgtccgtgcgaggctggcgagagcctcccg
ggcccggccccggagatctcggccccagagatctcagccccagagacctcggccccagag
acctcagccccagagacctcggccccagagacctcggccccggagatctcagccccagag
acctcggccccagagcccgaggagggcctccaggtgctcccgggcctccccaagagcaag
caggagctggagtgtttggtcaagcagatccacaaaaccatcaacagcagcgtccttccc
aagcttcacaaatgcctttctgccacgacgaaaagggaggaggagcacaagctcatcaag
tccaaggtcgtcaacgacgaggagatcgttcgcatccccctggccttcgccatggtcaaa
ctcatgcagtccctgccgcaggaagtcatggaagccaacctgccaagtattttgctgaaa
gtgtgtaccctcctacggaatcgagcccaggagatccgggatgttgctcgcaacaccctt
acaaaaataatagaaaccttgggtgtgcattatctgcaatacattttaaaagaattacag
agcacccttgttcgtggataccaggttcacgtgctcaccttcactgtttacatcttactg
aaagggcttgcaaacagcctcaaagttggagagttggacccttgcttggacatcatgatt
gggatctttaaccacgagctcttcggcagcgtcgctgaggagaaggaggtgaaggggatc
atctccaaggtcatggaggcccggcgaagcaagagctacgattcttatgaaatcctcggc
cggttcgtcgggaaggaccaggtcaccaagctcatccttcccctgaaagagatcctacag
aacaccaccagcctgaagctggcgcgcaaagtgcacgaagccctgcgccgcatcgtggcg
ggcctgatcgtcaacgcggggatgactgccgagtgcgtcctgctgctcggccacgggctc
atcagcgagaacctccctctgttaacagagaaggagaggagccaagccgagccccttccc
gacccgcgcctgcccccgcagagctgcctcctgctcccgcccacccccagccgaggcggg
ccgaaggcggccgtcagccgcaggaccaacatgcacatcttggtggaggctgggctgcgg
ctgctgcacatgagcctgaagcggtccaaggtgaactcctccgacgagcgcgtgctggag
atgctggatcctttcacgtccctgctcatcgattgcctcaagtccagagatgccaaggtc
atcacgggagccttgcagtctctcatctgggtgctgaagttccccctgccctccgtcacg
aagaactcggagaagctcaccaagcagctcttccttctgctcaaagactacgccaggctc
ggggctgccagaggccagaacttccacctggtcgtcaactgcttcaagtgtatgaccttc
ctcgtgaagaaggtcaagtgccacaagatcaccgagaggcagctccaggtcctgctggcc
tacgccgaggaggacatctacgactcgtcgcgccaggcgaccgccttcgggctcctgaag
gccattttatcaagaaaattgatggtcccagaaattgatgatgtcatgaaaaaagtgtcc
cagtttgcaattactggacaaagcgaaccagtcagagtccagtgtagacaggtttatctg
aaataccttcttgactaccctattgggaccaaactgaaatccaacttggagttcatgctg
gctcagttgaactatgactacgaggcggggagagagtctgctttggaaatgattgcccac
ctgtttgaaaccttccctcaggggctgctccacgagaactgcgggctcttcttcgttccc
ctgtgcctcatgatgatcaatgacaactctgccaagtgtaagaggatggcttccatggcc
atcaagctgttgctcactaaagtcagcctggaggacaaagacctgatgtatgtgctcgtg
gccaaatggtttgggagtcagaagagtctgcagaagcgcttggctgcccagacctgtggc
ctcttcgtggaggccgagggcccagcttttgagaggaggttcgcgacggtcctccctgtg
atcgagagagagcttgaaccttcccagctccgggatctcattgaagaaactgatgaaaaa
gcgtcagaccgacttctctttggttttcttattctgatcactaaactcatcaaggagtcc
aattttctccagctcaccaaatatccggagagtctgaacaatatctggagtcacatccag
acccatctgtcacacccccacagctgggtatggctcacttcagcccagatttttggactg
ttgtttgcctcctgcaaaccagaggacctgattaagaggtgggctgcccagcagtctaag
aagaagcagtcaggcccggtagccattaacttcctcacaaaggacctggatcacaagatg
aaaagactggctttagctttttgctttcagttgcagtcgaagtttctggatatgtctctg
ggagaacagatcgttaagaatctcttgtttgtggccaaagtcatctatctgctggtgctc
catgcagcagagaaggaacaggccccagaggagaccggggaggcggctgccccagaaaca
tcccaggccgccagcagcgaggagggggccgggcgctccgaagaggcccccgacaatgaa
aacgaggcggctgggtcggcggagaaggccggggcggaggaagagctcggcaggcccgcc
aatctcttctggctgatccacaagctgtctgtcatggccaaacgagaagccgcctactcg
cccaaaaatcctttaaagagaacctgcatcttcaagttccttggagctctggcccttgat
ctgggcccggacaaggtgcggcctttcctccccatgatcctcgccccgctgttccgggag
ctgaacagcacctactcagagcaagacccttccctgaagaacctctcccaggagatcctg
gagctgctcaagaagatggtgggcctggaggccttctcgctggccttcgcctcagtgcag
aagcgggccagagacaagagggcgctccgcctgaggcgcaaagccatgcagttcgtcact
aaccccgacatcgcggccaagaagaagatgaagaagcacaagaacaagagcgaggccaag
aagaggaagatcgagttcctgcggccgggctacaaagccaagaggccccggagccagggc
ctgcgcgatctggccatggtggagtga
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integrated database retrieval system
