Anopheles gambiae (malaria mosquito): 11175715
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Entry
11175715 CDS
T01036
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11175715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aga03021
]
11175715
03019 Messenger RNA biogenesis [BR:
aga03019
]
11175715
Transcription machinery [BR:
aga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
11175715
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
11175715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_4
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
11175715
NCBI-ProteinID:
XP_003436228
UniProt:
F5HKN3
LinkDB
All DBs
Position
2:26170185..26171740
Genome browser
AA seq
296 aa
AA seq
DB search
MDMLIANVDSWTFKIEKDLNEQYGALALPFPGMDKSTAAVCLFFNASDGTECKKGNSCPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP
ESKIKDCPWYDRGFCRHGPNCRHRHVRRVLCNNYLAGFCPDGPECKYMHPRFELPPPPEI
KDQTPKRPTTCHYCGEVGHKASYCPKMPLEQREATQRMEDAKYRALGYFKHRIHQDGGNN
PGAGGAGGEEGNFMPQKPPPRPIEEITCFKCGIKGHYANKCTKGPLAFLSNNVQRK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggacatgctgatagcgaacgtcgacagttggacttttaagatagaaaaggatctcaac
gaacagtatggagctttggcgcttcccttccccgggatggacaaatccaccgcggccgtg
tgtctgtttttcaacgcctccgacgggacggaatgcaagaagggcaactcctgcccgttc
cgacacatccgcggcgatcgcacgatcgtgtgcaagcactggctgcgcggtctgtgcaaa
aagggcgatcagtgcgagtttctgcacgagtacgacatgaccaagatgccggaatgctac
ttctactcccgcttcaacgcctgccacaacaaggagtgcccgtttctgcacatcgatccg
gagagcaaaatcaaagattgcccctggtacgatcgggggttctgccggcatgggcccaac
tgccggcaccggcatgtgcggcgcgtcctgtgcaacaactatctggccggcttctgtccc
gacgggccggagtgtaagtacatgcatccgcggttcgagctgccgcccccgcccgagatt
aaggaccaaacgccgaagcgtcccaccacctgccattactgtggggaggtgggccacaaa
gcatcgtactgtccgaagatgccactggagcaacgggaagcaacgcaacgcatggaggat
gccaagtatcgtgccctcggttacttcaaacaccgaattcatcaagacggaggaaacaat
ccgggtgctggtggtgctggtggcgaggagggaaatttcatgccacaaaaacctccccca
cgcccaatcgaggaaattacatgcttcaagtgcggcatcaaaggacactacgccaacaag
tgcacgaagggcccgctggcattcctttccaacaatgtacaaagaaagtag
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