KEGG   Anopheles gambiae (malaria mosquito): 1269414
Entry
1269414           CDS       T01036                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aga  Anopheles gambiae (malaria mosquito)
Pathway
aga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    1269414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aga03041]
    1269414
Spliceosome [BR:aga03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    1269414
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C PRP4 NBCH_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR75_2nd WD40_RFWD3 WD40_like Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NWD2_C WD_LRWD1
Other DBs
NCBI-GeneID: 1269414
NCBI-ProteinID: XP_308051
UniProt: Q7QK43
LinkDB
Position
2:16073817..16076250
AA seq 505 aa
MSDSEQSVYAKRTKTIHYGSLEESDRWHVDRKDNDADGSGRTEYSQLTTADYMALDEDVA
KEKAALLEEFERRKKARLIHVSTDDGEVKSALRKLNEPICYFGEGPADRRLRLKELLSAL
GEKGLPAAKPAKEEEKPKSQQKETNESTWYHEGPESLRVARFWIANYSLARAKKRLEEAS
EKVRQHSATKAGRMVELQKRIQQLAPQCSQVGDTRPITGCTINEDSTLLLTCSLSSLCKV
WSVPDCTLKQTLRGHKCNVSDVAFRPGVANDSKSEVAMASCSFDGSVKLWAYDNEESIAD
ISGHVPHRVAKLAFHPSGRFLGTACYDASWRLWDLEQKQEVLHQEGHTKAVHCIAFQVDG
SVCVTGGVDGFGRVWDLRTGRCIMFLEGHLSAIYGVDFSPNGYHIASGSQDNSCKIWDLR
RRQMVYTIPAHLNLISDVKYQKNGGNFLVTSSYDKTAKIWSDKTWQPLKTLSGHDGRLVG
VDISHDSQYIVTASYDRTFKLWAWD
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtccgacagtgagcagagcgtgtacgcaaagcggacgaaaacaatccactacggttcg
ctggaggaatcggatcgatggcatgtggaccggaaagacaacgatgcggatggttcggga
aggaccgaatacagccagctaaccaccgcagactacatggccctggatgaggatgtcgcc
aaagagaaagcagcactgctggaggaattcgagcgaaggaaaaaagcgcgactgattcac
gtcagcacggacgacggcgaggtgaagagtgcactgcggaagctgaacgaacccatctgt
tactttggcgaaggtcccgccgaccgacggttacgattgaaagaactgctctcggcactg
ggtgaaaagggtttgccggcagcgaaaccggctaaggaagaggagaaaccgaaaagccag
caaaaggaaacgaacgaatcgacctggtatcacgaggggccggaaagtttgcgtgtggca
cggttctggatagcgaactattcgctggcccgggccaagaagcggctggaggaggcgagc
gaaaaggtacgccaacattcggccaccaaggcgggccggatggtggagctgcagaaacgg
atccaacagctggcgccgcagtgcagtcaggtcggcgatacccgaccaatcaccgggtgc
accatcaacgaggactctacactactgctgacctgcagcctgagctccctgtgcaaagta
tggtccgtacccgactgcaccctgaagcagacgctccgtgggcacaagtgcaacgtaagt
gatgtggccttccggccgggtgttgccaacgatagtaaatcggaagtagcgatggcttct
tgtagcttcgacggttccgttaagctctgggcgtacgacaacgaagagtcgattgccgac
atcagcgggcacgtgccgcaccgggtggcgaaactcgcattccatccctccggccggttc
ctagggacggcctgctacgacgcgtcctggagactgtgggacctggaacagaagcaggag
gtgctgcatcaggaaggccacacgaaggcggtccactgtatcgctttccaggtggacggt
agcgtgtgcgttactggtggtgtggacgggtttggcagagtgtgggatttgcggacgggc
agatgtatcatgtttctcgagggccatctgagtgccatttatggggtggatttttcgccc
aatggttaccacattgcgtcgggcagtcaggacaattcgtgcaagatctgggatttgcga
agacgacaaatggtgtacacaattcccgcccacctcaaccttatttcggacgtgaaatat
cagaaaaatggtggtaacttccttgtgacgagcagttacgacaaaactgcaaagatttgg
tccgataaaacatggcaaccgcttaaaacactttccgggcacgacggacggttggttggt
gtagacatttcgcacgattcccagtacatagtgactgcgtcgtacgatcgcacgtttaag
ctgtgggcatgggactag

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