Anopheles gambiae (malaria mosquito): 1269783
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Entry
1269783 CDS
T01036
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
1269783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aga03019
]
1269783
Enzymes [BR:
aga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
1269783
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
1269783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
1269783
NCBI-ProteinID:
XP_308433
UniProt:
Q7PT32
LinkDB
All DBs
Position
2:115092619..115095350
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AA seq
633 aa
AA seq
DB search
MDITKQNFLEQLPSIREAIQNATFFAMDCEFTGLASDRTIFPFDTPEEVYLKMVENSPPY
IIVQFGLCAFRVEPPGEEEENEKKDGQPRVSYQCYNFYCYPKGRTNVFSCQGESMRFLAD
NGFDFNRLFREGLSYANETEEQRYRADLKDRQATRAANILAAAESDLTEEEPKLGEVNDV
NMIPVPPEHQQQVDDTAASIEEFLQSDRQELIVGSCNAFQRKLIYQMIEQRYQRKVSTST
VSLENNQKAIKVERKRSTEEEQALDEQRRTRENDDLETNVGLSLVLQELAKARKLIIGHN
MLLDLFYVLRQFFKPLPADYQEFKKLTKEYFPLLLDTKYLCTNAEIKVNVNSSVLAHVYD
AVSKAPFSIPKVHPELPDYQYSVDDEKKHEAGYDAYLTGLCFLGLVSKFKANLLQLPKDP
NLKHYLNRIFITRLTDVNYIYLNGKEPTQTREHIFYATFPETWRTGDIQNKFKPFGPVHV
SWLDNTSAFVALHNRSAASSVLKMIGYHSGFKVYNFAQFTQMKLQRPGAKRGRNGSSSAG
PGEDAGVRSAQPVNQRPSGEEKGQKEGQKIERPQTITTAAKRKGTDEATPPTNEADKDAT
AAKDDEHDNDEDNGGGWRTVKKARKTFTDNNDW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaccaagcaaaatttcctcgagcaactcccgtctataagggaagcgatacag
aatgcaacgttctttgcgatggactgtgagttcactggacttgcctcggatcgtaccatt
ttccccttcgatacgccggaagaagtgtatctgaagatggtggaaaacagccccccgtac
atcatcgtacagttcgggctgtgtgcgttccgggtggaaccgcccggcgaggaggaggag
aacgagaagaaggatggtcaaccgcgcgtatcctaccagtgttacaacttctactgctat
cccaagggccgcacgaatgtgttcagctgtcagggcgagagtatgcgcttcctcgccgac
aatgggttcgactttaatcgtctcttccgcgaaggactttcgtacgccaacgaaacggag
gagcaacgctatcgggcggatttgaaagaccggcaagctacgcgggcggccaacattctc
gctgcggcggagagtgacctgacggaggaagaaccgaagttgggggaagtgaacgatgtc
aacatgataccggtgcctcccgaacaccagcaacaggtggacgatacggcggccagtatt
gaggagtttttgcagtccgatcggcaggagctgatcgtcgggagttgcaatgcgttccag
cggaagctcatctatcagatgatcgagcaacggtaccagcgaaaggtgtccacttcgacg
gtttcgctcgagaacaaccagaaagcgatcaaggtggaacggaaacgttcgacggaagag
gagcaggcgctggatgagcagcggcgaacgcgcgagaacgacgatctcgagacgaacgta
gggttgtcgctggtgctgcaggagctggcaaaggcacggaaactaatcattggccacaat
atgctactggatttgttctacgtgctgcgccaattctttaaaccactgccggcggactat
caagagtttaagaagctgacgaaggaatatttcccactccttctagataccaagtatcta
tgcacgaatgcggagattaaggtgaatgtcaactcctccgtactagcacacgtgtacgat
gcggtaagcaaggcaccattctcgatccctaaggtgcatcccgagctgccggattatcag
tacagcgtggatgacgagaaaaagcacgaagcaggctacgatgcttaccttacggggtta
tgtttcttggggctggttagcaaattcaaagctaatctgctgcaacttcccaaagatccc
aacttgaaacactatctaaacagaattttcatcactcgcctaaccgacgtgaactatatt
tatttgaacgggaaagaacccacacaaacgcgggaacatatcttctacgcaacgttccca
gaaacctggcgcaccggggacatccagaacaagttcaaaccgttcggccccgtgcacgtt
agctggctggacaatacgtccgcgtttgtggcattgcacaaccgtagtgccgcgagctcg
gtgctgaaaatgatcggctatcactccggcttcaaagtgtacaactttgcacaatttacg
caaatgaaactgcaacgccctggagctaaacgaggacgaaacggttcgagtagtgctggc
cccggagaagatgcaggagttcgaagcgcacaaccagtcaatcaacggccgagcggggaa
gaaaaaggacaaaaagaaggccaaaaaatagagcgtccgcaaacgatcaccactgccgcc
aagcggaagggtacggatgaggcaacgccgcctacgaacgaggcggacaaggatgctact
gctgccaaggacgacgagcacgacaacgacgaagacaacggtggcggctggagaacggtt
aaaaaggcgcgcaaaacattcaccgataataacgattggtag
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