Anopheles gambiae (malaria mosquito): 1270778
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Entry
1270778 CDS
T01036
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
1270778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aga03041
]
1270778
03009 Ribosome biogenesis [BR:
aga03009
]
1270778
Enzymes [BR:
aga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
1270778
Spliceosome [BR:
aga03041
]
Complex A
U2 snRNP components
U2 related factors
1270778
Complex B
1270778
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
1270778
Ribosome biogenesis [BR:
aga03009
]
Eukaryotic type
90S particles
Helicases
1270778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
nSTAND3
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
ResIII
ABC_tran
TsaE
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
1270778
NCBI-ProteinID:
XP_061518278
VectorBase:
AGAP011149
LinkDB
All DBs
Position
3:75631494..75635196
Genome browser
AA seq
745 aa
AA seq
DB search
MSKRRIEVMDPFIKKRREEKAAAEGAAGASSSKLDAAGSSSSGPSSASKAAAAAAAAGSA
TESGGKNPLNGIAYTQNYYKLYKKRITLPVFEYKTDFMRLLSEHQCIVLVGETGSGKTTQ
IPQWCVEYALQTSSKGVACTQPRRVAAMSVAQRVSEEMDVMLGQEVGYSIRFEDCSSPRT
LLKYMTDGMLLREGMSDPMLEAYQVILLDEAHERTLATDLLMGVLKEVIRQRKDLKLVVM
SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGD
ILMFLTGQEEIEEACKRVKREIDNLGPDVGELKCIPLYSTLPPPMQQKIFEPAPPKRPNG
AIGRKVVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG
RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPP
APETLMRALELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSIT
AMLSVPQCFVRPNEMKKAADDAKMRFAHVDGDHLTLLNVYHAFKQNNEDQGWCYDNFINY
RSLKSADNVRQQLARIMDRFQLQRTSTDFTSREYYFNIRKALVQGFFMQVAHLERTKHYQ
TIKDNQVVQLHPSTCLDHKPEWVIYNEFVLTTKNYIRTVTDVKPEWLLQIAPQYYDMNNF
PLCEAKRQLELILARMDSKQFQQGF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcgtatcgaggtgatggaccctttcattaagaagcgaagggaggagaag
gcagcggccgaaggggcggctggcgccagctcgtccaagctcgatgcggccggctcgtcc
tccagcgggcccagctccgcctcgaaggcggcggcggcagcagcggccgccggttccgcc
accgagtcgggcggcaagaacccgctgaacggtatcgcctacacgcagaactactacaag
ctgtacaaaaagcgcatcacgctgccggtgttcgagtacaagacggactttatgcggctg
ctgtcggagcaccagtgcatcgtgctggtcggtgagaccgggtcgggcaaaaccacccaa
atacctcagtggtgcgtggagtacgcgttgcagacgagctcgaagggggtggcgtgtacg
cagccgcgccgtgtcgccgccatgtccgtggcccagcgcgtctcggaggagatggacgtg
atgctcgggcaggaggtgggctacagcatccgtttcgaggactgctccagcccgcgcacg
ctgctcaagtacatgacggacggtatgctgctgcgcgaggggatgagcgatccgatgctg
gaagcgtaccaggtcatcctgctcgacgaggcgcacgagcggacgctcgcgaccgatctg
ctgatgggcgtgctgaaggaggtgatccggcagcgcaaggatttgaagctggtggtcatg
tcggccaccctcgatgcgggcaagttccagcagtacttcgacaacgcgccgctcatgaac
gtccccggccggacgcacccggtcgagatcttctacacgcccgagccggagcgcgactat
ctggaggccgcgatccgcaccgtcatacagatacacatgtgcgaagagatcgagggcgac
atactgatgttcctgaccgggcaggaagagatcgaggaggcgtgcaagcgggtgaagcgc
gaaatcgacaacctcggcccggacgtgggcgagctgaagtgcatcccgctctactcgacg
ctgccgccgccgatgcagcaaaagattttcgaaccggcaccgccgaaacggccgaacggt
gcgatcggccgcaaggtggtcatctcgacgaacattgcggaaacgtcgctcacgatcgac
ggcgtggtgtttgtgatcgatcccgggttcagcaagcagaaggtgtacaatccgcgcatc
cgggtggaaagtttgctcgtgtcgccgatcagcaaagcatcggcccagcagcgggccggc
cgggccggccgaacgcgccccggcaagtgtttccgcctgtacacggagaaggcgtacaag
acggagatgcaggacaacacgtatccggaaattttgcgttccaatttgggcacggttgtg
ctgcagttaaagaagcttggcatcgatgatttggttcacttcgattttatggatccgccg
gcgccggaaacgctgatgcgtgcgctcgagcttctcaactatctggccgccctggacgat
gacggtaacctgaccgatctcggtgcagttatggccgagtttccactggatccgcagcta
gcgaaaatgctaattgccagctgtcagcacaactgctccaacgaaattctttccatcacc
gctatgttgtcggttccacagtgcttcgtgcgaccaaacgagatgaagaaagcggccgat
gatgctaagatgcgcttcgcgcacgtcgatggcgaccatctgacgctgctgaacgtgtac
catgcgtttaagcagaacaatgaagatcagggatggtgctatgataacttcatcaactac
cgctccctgaagtcggcggacaacgtgagacagcagctggcccgcattatggaccgcttc
cagctccagcgcaccagcacggacttcacctcgagagagtactattttaacattcgcaaa
gcattggtacagggcttcttcatgcaggtcgcacatttggaacgaaccaagcactatcag
acgataaaggacaaccaggtggtgcaactgcatccgtccacttgtctggaccacaaaccg
gaatgggtaatttacaacgagtttgtgctgacgacgaaaaactacatcagaactgtcacg
gatgtaaagccggaatggttactgcagattgccccacagtactacgacatgaataacttc
cctctatgcgaggcgaaacggcagctcgagctgatactggcgcgcatggactcgaagcag
ttccagcaaggattttaa
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