Anopheles gambiae (malaria mosquito): 1273349
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Entry
1273349 CDS
T01036
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
1273349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aga03021
]
1273349
03019 Messenger RNA biogenesis [BR:
aga03019
]
1273349
Transcription machinery [BR:
aga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
1273349
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
1273349
U7-dependent histone pre-mRNA processing factors
1273349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
Motif
Other DBs
NCBI-GeneID:
1273349
NCBI-ProteinID:
XP_312315
VectorBase:
AGAP002618
UniProt:
Q7QCG6
LinkDB
All DBs
Position
2:complement(23995618..23999826)
Genome browser
AA seq
1190 aa
AA seq
DB search
MENLLRGSSSFSEAAMLFTDEKIASARTKIVEALNEAQLATSGQKCEIIAKVQELLLHTD
VELLNEFLENMLVLAHDPVAEVRKAIAGFIDEICKQHIAMLPKVVGPMFSLLRDSAPVVT
KRVIQGCGSIYRLAIQWICQLDDIPEEVEQAWNTLCLMKISILDMIDHDNDGIRTNAIKF
LEGVVILQTYPDEDSQKRENDFSLEDVPLTMKQIRRRKLEDEATNIFELLLQFHGASHIS
SVNLIACTGTLCTIAKLRPSTMTRVVEALKHLHSNLPPTLTNSQVSSVRKNLKMQFLNLL
KHPASFEHQATIAQILVDLGASNGEITRAIPKLDKREQQRRAKRALENSMASQLAAKRAK
VDGQARKERDDGGTVGESPRDQPRTMEIDYEELNEQKSRSTKQNEQFLLEVLPKTDLVVQ
LVLSNMDKLTEQMLQSAKPAAVLTVEQYIQKIAQTLAAQMSEVKAGPGASAFTKDPPMKV
RISDEEEKSIILSGKRKPVDPSATPLPPSIGEEDLPEGGAGLPEEDEDDEALSEEDRQKL
EATRKLRETLERVKGGTATGEPKLRQRIKMLKLQEITKPLPKATKETFLLDAVVRILKAE
RQALVGGVSMQRNRIITAFGASFINPVRDVIMEHILEDLPKRIELAFSWIFEEYGLMQGF
TRYTHVKHDNGPQYPYTQLLVRLVTNVTERPKDTFRQKESLLKRLYLEAPMLPQELIDML
VRMCELEELVDCGMQIVKDLLIRRPPREKQYLDILLKYAYYENGTIREKAIEYVMSVFAV
HRIMTEDIEKKALVWLAHLENELPPESMFAAEYGRAEHPRTWTEELAKVCLGLFLEVMVY
DQTLLMRFSEVYIKATSEMKRAVIRAIEGPIRKIGSESEELLRLIEQCPKGSETIIIRII
YILTEKSLPSPDLVERVRTLHQTKVSDVRLLIPVINGLTKKEILSALPKLIKLNPGVVKE
VFNRLLGIGVEYGPAELPLTSVELLVALHTIETSKVELKFIVKATSLCLAEKEVYTHDVL
GSVLQQLVEITPLPTLLMRTVIQSLTLHPRLAGFVTNLLQRLILKQVWKQKVVWDGFIKC
AQRLTPQSLGVLIQLPAQQLQDAITICPEFREPMLEHAREIMEHQIGHVSQQVMDVLLGI
SPYSTTESADLQIVGNYSEEAPMSSHMPVKIKQEKDVEPPAAPTPPQSKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctactgcgagggtcgtctagcttcagcgaggctgcgatgctatttaccgac
gaaaagattgccagtgctagaaccaagatcgtcgaagcgctgaacgaggcgcagctggca
acgagcggccagaagtgtgaaatcattgccaaagtacaggagctgctcctacacaccgat
gtggaactgttgaacgagtttctggaaaacatgctggtgcttgcgcacgacccggtggcc
gaagtgcggaaagcgatcgccggctttatagacgaaatctgcaagcagcacatcgcgatg
ctgccgaaggtggtgggcccaatgttttcgctgctgcgcgactcggccccggtcgtgacg
aagcgcgtgatacagggctgcggttcgatctaccggctggcgatccagtggatctgccag
ctggacgacataccggaggaggtggagcaggcctggaacacgctctgtctgatgaagatt
tccatcctggacatgatcgaccacgacaacgacggcatacggacgaatgcgatcaagttc
ctagagggtgtcgtcatcctgcagacctacccggacgaggatagccagaagcgcgagaac
gacttctcgctcgaggacgtaccgctcacgatgaagcagatccgccgccggaagctggag
gacgaagcgaccaacatctttgagctgttgctacagtttcacggtgcgtcccacatatcc
tcggtgaatctgattgcctgtaccggcacactgtgcacgattgcgaagctacgcccatcc
acgatgacgcgcgtggtcgaggcgctgaaacatctgcactccaacctgccgccaacgctc
accaactcgcaggtcagctcggtacggaagaatctgaagatgcagtttctgaatctgctc
aagcatccggccagcttcgagcaccaggcaacgattgcgcagatactggtcgatctcggt
gcgtcgaacggtgagattacgcgtgccattccgaagctggacaaacgggagcagcagcgg
cgggcgaaacgtgcactcgaaaactcgatggcatcgcagctcgcggccaagcgtgccaag
gtggacgggcaggcacgaaaggaaagggatgacggcgggacggtgggtgagtcgccgcgc
gatcagccgcgcacgatggagatcgattatgaggagctgaacgagcagaagagtcgctcc
accaagcagaacgaacagtttctgctcgaggtgctgccaaagacggacctcgtcgtccag
ctagtgctctcgaacatggacaagctgaccgaacagatgctgcagagtgcgaaacccgcc
gccgtgctgacggtcgaacagtacatccagaagatcgcccaaacgctggccgcccagatg
agcgaagtgaaggccgggcccggtgcgagcgccttcacgaaagatcccccgatgaaggtg
cgcatcagcgacgaggaggagaaaagtattatcctttccggcaaacggaagccggtcgat
ccgtcggcaacgccacttcctccctcgattggggaggaagatctgccggagggcggtgcc
ggtctaccggaggaggacgaagacgacgaggcactgtcggaggaggatcgccaaaagctg
gaagcgacccgcaagttgcgcgaaacgctcgaacgcgtcaagggcggtacggcgacgggc
gaaccgaagctaaggcagcgcatcaagatgctgaagctgcaggaaatcacgaaaccgctg
ccgaaagcgaccaaggaaacgttcctgctcgatgcggtcgtgcggatactcaaagcggaa
cggcaggccctggtcggtggggtgagcatgcagcggaatcgtatcatcaccgcgttcggt
gcgtccttcatcaacccggtgcgggacgtgatcatggagcacatactggaggatctgccg
aagcgcatcgagctggcgttttcctggatcttcgaagagtacgggctgatgcaggggttc
acgcgctacacgcacgtcaagcacgacaatgggccgcagtatccgtacacgcagctgctg
gtgcgcctcgtcacgaacgtgaccgagcggccgaaggatacgttccgccagaaggaatct
ctgctcaagcggctctacctggaggcgccgatgctgccccaggagctgatcgatatgctc
gtgcggatgtgcgagctggaggagctggtcgattgtggcatgcagatcgtgaaggatttg
ctgatccggcggccaccgagggagaagcagtatttggacattctgctcaagtacgcgtac
tacgagaatgggacgatccgggagaaagcgatcgagtacgtgatgagcgtgtttgccgtg
catcgcatcatgacggaggacatcgagaagaaggccctcgtctggttggcccatctggag
aacgagctgccgccggagtcgatgtttgcggccgagtacggccgagcggaacatccgcgc
acgtggacggaggagctggcgaaggtttgcctgggcctgtttctggaggtgatggtgtac
gatcagacgctgctcatgcgcttctcggaggtgtacattaaggcgacgtcggagatgaag
cgcgccgtgatacgggcgatcgagggcccgatccggaagattggctcggaaagcgaggag
ctgctgcggctgatcgaacagtgcccgaagggctcggaaacgatcatcatacgcatcatc
tacatcctcacggagaaatcccttccttcgccggatcttgtggagcgtgtgcgcaccctg
caccaaacgaaggtatccgacgtgcgattgctcatccccgtcatcaatgggctgacgaag
aaggagatcctatcggcactgcccaaactgatcaaactgaacccgggcgtcgtcaaggag
gtattcaatcggctcctgggcatcggcgtcgagtacgggccggccgagctgccgctcacc
tcggtcgagctgctcgtcgccctgcacacgatcgagacgagcaaggtggagctgaagttt
atcgtgaaagcaacctccctgtgcctggccgagaaggaagtgtacacgcacgatgtgttg
gggagtgtgctgcagcagctggtcgagattacgccgctaccaacgctactgatgcgcacg
gtgatccagtcgctaacgcttcacccgcggctggccggcttcgtgacgaacctgctgcag
cggctcatcctcaagcaggtgtggaagcagaaggtggtgtgggatggcttcatcaagtgc
gcccagcgcctgacgccccaaagcctcggtgtgttgatacagctgccggcgcagcagctg
caggacgcgatcaccatctgtcccgagttccgcgagccgatgctggagcatgcgcgcgaa
atcatggagcaccagattgggcacgtgtcgcagcaggtgatggacgtgctgctcggcatc
tcgccctactcgacgacggaatcggccgacctacagattgttggtaactacagcgaagag
gcgccaatgtcctcccacatgccggtgaaaattaagcaggaaaaggatgtggaaccacct
gccgctccaacaccgccacaaagcaaggagtag
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integrated database retrieval system
