Anopheles gambiae (malaria mosquito): 1273854
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Entry
1273854 CDS
T01036
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
1273854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aga03019
]
1273854
Enzymes [BR:
aga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
1273854
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
1273854
mRNA degradation factors
3'-5' decay
Ski complex
1273854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
ResIII
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
Ski2_beta-barrel
ATPase_2
Spectrin_Anc-1
LIF1_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
1273854
NCBI-ProteinID:
XP_312880
LinkDB
All DBs
Position
2:33345281..33349555
Genome browser
AA seq
1223 aa
AA seq
DB search
MSFDPTWLKEPPPIVEDTEDLLRAFILEPKIPIHEPKPYFEPRHPSFDQLYDIPHAPIST
RIVPDRCPETGKVLDFIETQVQNAGSTAKNSMSLQREPTESIDSARGSASYFPFWPGGFD
EPESVLAGLVPSPLFETDLKSCPPGFATGVEFEAPPTGTDGARATEDSGKSGMVDLLSAI
ASEEAFVELLPEGLQTKLSTNDQSTQGTQQEPLPAGIDEEEGLLAVTGEQEAGEQVLKIS
TVTNNALQSAEWAEMLDISKPVDDFYVKIPTMAHRFPFELDIFQKQAILKLEEHSHVFVA
AHTSAGKTVVAEYAIALSKKHMTKTIYTSPIKALSNQKYRDFKTTFQDVGLITGDIQIDP
TASCLIMTTEILRSMLYCGSDITRDLEYVIFDEVHYITDSDRGHVWEEVLILLPDHVCIV
MLSATVPNTIEFANWVGKTKKKRVWVVSTAKRPVPLEHYLYTGFGGKSKDDSFLIVNAQS
QFVQDGYRRAKESYEAKQAKSTGRRTNGPYSQRQEQTLWVGLIDHLQKKEKLPVVAFTLS
RNRCDNNAEALMSCDLTTAREKYAITSFFQQCLQRLVPADRVLPQVQQIQSCLERGIGIH
HSGILPILKEIVEMLFARGLVKILFATETFAMGVNMPARTVIFDSTRKFDGQAFRPLQPS
EYTQMAGRAGRRGLDKTGTVIILCKQNLPLDGELKTMILGKPVRLESQFRLTYAMMLYLL
RVELVSVENMMLHSFREFDKRQQMPQSKLELNQVQEKMSALSKLSDHLQPLCEFYEAASE
YLNLRNELLPKQLCQPKAINELKVGRVVVVTDEHHYNKLGILLSVSVQSHKELKLVVLVL
DHCASGKTQPASPETLNRGPLWHQMLSLALPYQTFLPEGVGGHAVLTLAPVNLIELTKHT
IKCDANGIIRSWEYRLIPRFRDAPPSQSTIEAVAALAELNATVVQAGSVAGTLELVRFPR
DLTNLELTQQLQVAQGRLNRWLPYTGMADFEHEFAVVYDRKQLERKLDELKYQASYESLS
LYPDYCRKLQVLQELKYIDDMQQVAMKGRVACEMGQNELMITELVMRNILTDLQPAEIAA
LLSSLVFQAKSDVTPKLTETLQKAEAQFREVENDIRLVERQYGVTDVCKKEELNFGLTEV
VYEWARNKPFAEIMLLTDIKEGIIVRCIQQLNETLCNVKDAARIIGDPVLHSKMEEASNA
IKRDIVFAASLYTSSTPIVIGEV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgatccgacctggttaaaggaaccgccgccgatcgtggaagacacggaagac
ctgctgcgcgcctttattctcgagccgaaaatccccatccacgagcccaaaccgtacttc
gaaccgcgccatccctccttcgaccagctgtacgacattccgcacgcaccgatcagcacc
cggatcgtgccggaccgctgcccggagacgggaaaggtgctggactttatcgaaacgcag
gtgcagaatgcgggctcgacggccaaaaactccatgtcgctgcagcgcgaaccgaccgaa
tcgatcgattcggcccgtggttccgcctcgtactttcccttctggccgggagggttcgac
gagccggaaagtgtgctggccggactagtacccagcccgctgtttgagacggatttgaaa
tcgtgcccgcccgggttcgctaccggtgttgagtttgaggcaccgcccaccgggacggac
ggtgcgcgcgcgacggaagacagcgggaagagcggtatggtcgatctgctgtccgcgatt
gccagcgaggaagcgttcgtcgagctgctgcccgaagggttgcaaacgaaactgtccacc
aacgaccagtcaacgcagggcacacagcaagaaccactgccggcgggtatcgacgaggag
gagggtctgctggcggtgaccggtgagcaggaggccggcgaacaggtgctgaaaatttcc
accgtcaccaacaacgcgctccagagcgccgagtgggccgagatgctggacatttcgaaa
ccggtggacgatttctacgtgaaaatccccaccatggcgcaccggttcccgttcgagctg
gacatcttccagaagcaggcgatcctgaagctggaggagcacagccacgtgttcgtggcg
gcgcacacgtccgccggcaagacggtcgtggcggagtacgcgatcgccctgtcgaaaaag
cacatgaccaaaacgatctacacgtccccgatcaaggcactgtcgaaccagaagtatcgc
gacttcaagaccaccttccaggacgtcgggctgatcaccggggacatacagatcgatccg
accgcgtcctgcctcatcatgacgaccgagatcctgcgctcgatgctgtactgcggcagc
gacattacgcgcgacctcgagtacgtcatcttcgacgaggtgcactacatcaccgactcc
gaccgggggcacgtgtgggaggaggtgctgatcctgctgcccgaccacgtctgcatcgtg
atgctgagcgccaccgtgccgaacacgatcgagttcgccaactgggtgggcaagacgaag
aagaagcgcgtgtgggtcgtcagcacggccaagcggccggtcccgctcgagcactacctg
tacaccgggtttggcggcaagtcgaaggacgactcgttcctgatcgtgaacgcgcagagc
cagttcgtgcaggacgggtaccggcgggcgaaggaaagctacgaggcgaagcaggcgaaa
agcacgggccgccggaccaacggcccctacagccagcggcaggagcaaaccctgtgggtc
gggctgatcgatcatctgcagaagaaggagaaactgccggtggttgcgttcacgctgtcg
cgcaaccggtgcgacaacaacgcggaagcgctcatgtcgtgcgatctgacgacggcgcgc
gagaagtacgccatcacgtcgttcttccagcagtgcctgcagcggctggtgccggccgac
cgtgtgctgccgcaggtgcagcagatccagagctgcctcgagcggggcatcggcatccat
cacagcggcatcctgcccatcctgaaggagatcgtggagatgctgtttgcccgcgggctc
gtgaagatactgttcgcgacggagacgtttgcgatgggcgttaacatgcccgcgcgcacc
gtcatctttgacagtacgcgcaagttcgatgggcaggcgttccggccgctgcaaccgtcc
gagtacacgcagatggcgggccgggccgggcggcgcggtctcgacaagaccggcacggtc
atcatcctgtgcaagcagaacctgccgctcgatggcgagctgaagacgatgatactcggc
aagccggtccggctggagtcgcagttccggctgacgtacgcgatgatgctgtacctgttg
cgggtggagctggtctcggtggagaacatgatgctgcacagcttccgggagttcgacaag
cgccagcagatgccccagagcaagctggagctgaaccaggtgcaggagaagatgtccgcg
ctgagcaagctgagcgatcatctgcagccgctgtgcgagttttacgaagcggccagcgag
taccttaaccttcggaatgagctgctccccaagcagctgtgccaaccgaaggcaatcaac
gagcttaaggtaggccgcgttgtcgtggtaacggacgagcaccactacaacaagctcggc
atactgctctccgtctcggtgcagtcgcacaaagagctgaagctggtcgtgctggtgctg
gatcattgcgcgagtggcaaaacccagccggcatcgccggaaacgctcaaccggggaccg
ctctggcatcagatgctgtcgctcgccctgccctaccaaaccttcctgcccgagggtgtc
ggtggccacgccgtgcttaccctcgctccggtgaatttgatcgagctgaccaagcacacg
atcaagtgcgacgcgaacggtatcatccgcagctgggagtatcggctcataccgcggttc
cgcgatgcgcccccgtcccagtcgacgatcgaggccgtcgctgcgctggccgagctgaat
gcgacggtggtgcaggccgggtccgtcgctggcacgctcgagctggttcggttcccgcgc
gatctaaccaatctcgagctaacgcagcagctgcaggtagcccagggccggctgaaccgt
tggctgccgtacactgggatggccgactttgagcacgagtttgctgtggtgtacgatcgc
aagcagctcgagcggaagctggacgagctcaagtaccaggcgtcgtacgaaagtctctcg
ctgtacccggactactgccggaagctgcaggtgctgcaggagctcaagtacatcgacgat
atgcagcaagtggcaatgaagggccgtgtcgcttgcgagatgggtcagaacgagctgatg
ataacggagctggtgatgcgcaacatactgaccgatctgcagccggccgaaatcgctgcc
ctgctctccagcctggtgtttcaagcgaaatcggacgtcactcccaagctcaccgagacg
ctccaaaaggccgaggcccagttccgcgaggtggaaaacgacatccggctggtggagcgc
cagtacggcgtgacggatgtgtgcaaaaaggaggagctcaactttggcctgaccgaggtg
gtgtacgagtgggcgcgcaacaaaccgttcgccgaaattatgctgctgaccgacatcaag
gagggcattatcgtgcgctgcatccagcagctgaacgagacgctgtgcaatgtgaaggac
gcggcgcgcatcattggcgatccggtgctgcacagcaagatggaggaagcgtccaacgcg
atcaagcgcgacatcgtgtttgcggccagtctgtacacctccagcacaccgatcgtgatt
ggggaagtgtaa
DBGET
integrated database retrieval system
