Anopheles gambiae (malaria mosquito): 1277999
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Entry
1277999 CDS
T01036
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aga03041
]
1277999
Enzymes [BR:
aga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
1277999
Spliceosome [BR:
aga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
1277999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
HA2_C
R3H
HA2_N
Ank_5
ATPase
Ank_2
nSTAND3
AAA_19
Ank
ResIII
AAA_22
Ank_3
T2SSE
AAA_16
AAA_7
Ank_4
NPHP3_N
TsaE
PhoH
ComR_TPR
AAA_11
Motif
Other DBs
NCBI-GeneID:
1277999
NCBI-ProteinID:
XP_061516783
LinkDB
All DBs
Position
3:3260706..3264665
Genome browser
AA seq
1089 aa
AA seq
DB search
MASKGKISVKIEEDIRISIHRQIDLFLQDETQVEFDFPVHLTNQHRAYIHEYVRNKRLKS
RSHGKGTNRYLTIYKTSLSDITHGDAVLDLTPESNDILNEIQKECGMFCKPGTSSTKGHP
IRLHPINVTSFPPSVPPFPTSSGEILAVRKSLPIAQFHEIILKCIQHNQVIIISGNTGSG
KTTQVPQFILEEAAQQNLPCRIICTQPRRISAVTVSERVCVERNEQLGDTVGYQIRLESR
AKSTTNALFCTNGVLLRCLMGKHSSKFLKNVTHIIIDEVHERDQYSDFLLIALKDKLSKN
AHLKIILMSATIESDTFSKYFNNCPVIEIPGRLFPIETFFLEDILLNVDTSNHNVKDIRK
KMMKSFEAQAVERTKPITVNMDDETILLMNDILEVCWIENNPEDFRNFFTLIEEENISID
FQHTETKMTALMIAAAKGYIAIVQKLLEMGADPSIQEKHNYNAFDWACFVHGSSTCSDIL
KQALNKSGLSVPRTMPLTPHSTKQILDAYHTSVGDDRIDHNLIIDVILHICRKHPEGGIL
VFLPGFEDIQEQYGLLNSKVSNIHCIRMFMLHSKMQTADQHSVFKPVPSGVRKIILSTNI
AETSITMDDVVYVIDSGKVKQKYYDSLTSTSSLAATWISQACATQRAGRAGRTRPGTCFR
LYSRMRHSEMDQYTLPEIMRVPLTEICLQTALIIKDESIQEFLNKAITAPSTTSIKQSIK
YLQKVGALDDEESVTDLGYTLAELPVDARLGKMLLYGILLKCYEPVLLVVCILSINDLFV
IPPFPGDKERAKKVRQDLAENSYSDCYCLLRAYQRWLDARSVQKRKELCNRLFLNHGKLT
MVSELRNKLHAHLCSIGVVKSYGPGSVKDLNEFANNWSLVKGILLVGLYPNVSYLEKYSK
TMKTRFEKKIFIHPSSVVGGKASKKQKTTDNALCLPSEWITFEEKCKSGRGSMIRCNTVI
SPITIAIFAGPLSLDDTECITKSDAMEQDHCRIAVDDWINLMAKESVAKSVLHTRRMVHG
LFLKFIENPRIHQSDSNERKLLDALGKVLAIEDHTIDVTNQLEYFTKNDKQKEQQHHRHY
RRREHYNRF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaaggaaaaattagtgtgaaaatcgaggaagacatcagaatatcaatccac
agacaaatagacttgtttctccaggacgaaacgcaagttgagtttgatttcccggtacat
ttaacaaatcaacatcgcgcatacattcacgagtatgtgaggaacaaacgcctgaagtcc
aggtctcatggaaaaggcaccaacagatacttaacgatatacaaaacaagtttatcggat
attacccatggcgatgctgtgctagacttaacacccgagtcgaatgatattctaaacgaa
atacagaaggaatgcggcatgttttgcaaacccggcacaagttcgacaaaagggcaccct
attcgattgcatcccatcaatgttacttcatttccgccttcagtaccaccgtttccgacc
agctctggggaaatactggcagtgcgtaaaagtttacctattgcccagttccacgagatc
attttgaaatgcatacagcataatcaagtgattataatatcgggaaacacaggatccggc
aaaacaacgcaggttcctcagtttatcttggaagaagctgcgcaacaaaatctaccttgc
cgaattatctgcacacagcctagacgcatcagtgctgtgaccgtgtcggaacgagtttgc
gttgagcggaacgagcagttgggagacacggtgggctatcaaatacgtttggaaagtcgt
gctaaatcaaccaccaatgcattattctgcaccaacggtgtattgcttcgctgcttgatg
ggaaagcatagttctaaatttctgaagaacgtcacacacataatcatcgatgaagtgcac
gagagagatcaatattcggattttctactgattgcgttgaaagataaattgtccaaaaat
gcccacctgaaaattatcctaatgtctgccaccatagagtcggacacgttttcgaaatat
tttaacaactgtccagtcattgagataccgggcagattgtttcccatagaaacgtttttc
ctggaggatattttgttaaacgtcgacacatccaaccacaatgttaaagatattcgaaaa
aagatgatgaaaagtttcgaagcgcaagccgtagagaggacaaaaccgataactgtaaat
atggacgatgaaaccatattactgatgaatgatatactggaagtttgctggatcgaaaac
aatcccgaagattttcgtaacttttttacgctaatcgaagaagaaaacatttccatagac
tttcaacacacggaaaccaaaatgactgcattgatgatcgcagcggcgaaaggttacatt
gcaatcgtgcaaaagctgctggagatgggagctgaccctagcatacaggagaagcataat
tacaacgcattcgactgggcttgcttcgtgcatggtagcagcacctgttcggatattctt
aaacaagcccttaacaaatcgggtttatcagttccacgcactatgccattgacgccgcac
agcacaaaacaaatactggacgcatatcatacctcagtcggagacgataggatcgatcat
aacttgattattgatgtaattctacatatatgcaggaaacatccggaaggaggcatacta
gtgtttctgcccggcttcgaagatatacaagaacaatacgggctgttaaacagcaaagta
tcgaacatccactgcataagaatgttcatgttgcacagtaaaatgcaaacagcagaccag
cattccgtgttcaagcctgtgccttcgggggtgcgcaaaataatcctttctacaaatatt
gccgaaacatcaatcacgatggatgatgtggtgtacgtgatagatagtggaaaggtgaaa
cagaaatactacgactcgcttacatctaccagttcgctagctgccacgtggatctcgcaa
gcttgcgccacacaacgcgccggtcgggcaggacgcaccagacccggcacttgcttccga
ttatacagtcgaatgcgacacagtgaaatggatcagtacacactgccggaaataatgcga
gtcccgctcacggaaatatgtctgcaaactgctttgattataaaagacgagtcaatacag
gagtttctaaacaaagcaataacagcaccgtcaacaaccagcatcaaacaaagcataaaa
taccttcaaaaggtgggcgctttggatgatgaggagagcgtaaccgatctgggttacacg
ctagcggagctaccggtagatgcgaggctggggaaaatgctgctttacgggatactgctg
aaatgctatgagcccgtcctgctggttgtttgtatattgagcatcaacgatctcttcgtg
atacctccctttccaggcgataaagaaagggcaaaaaaagttcggcaagatttggcggag
aattcgtacagcgattgctactgtttgcttcgtgcttaccaacgatggttagatgctcgg
tctgttcaaaagcgcaaagaattgtgcaatcgactgtttttaaaccacggtaagctaacg
atggtaagtgagttgcgcaacaagcttcatgcacatttatgttccatcggagtcgtgaaa
tcgtacggaccgggaagtgtaaaagacttgaacgagtttgccaacaactggagcctcgta
aaagggatattgcttgtgggactgtatcctaacgtgagttatctggaaaagtattccaaa
acaatgaaaacacggttcgaaaagaagatttttatccacccgtcttcggtggtcggtggc
aaagcttccaaaaaacaaaaaactacggacaatgccctttgcttgccgagtgaatggata
acgtttgaggaaaaatgtaaatcgggtagagggtccatgatacgatgcaatacagtgata
tcaccaataacgatcgctatctttgccggacctttgtcgttagatgatacggaatgtata
acgaagagtgacgctatggagcaagaccactgccgaatagcagtagatgattggataaat
ttaatggcaaaagaatctgtggctaaatcagtgctgcacacccgcaggatggtgcacggg
ttgtttcttaagtttatcgaaaatcctagaatccatcaatccgactcgaacgaacgcaag
ctgttggatgcgttgggcaaagttctagcaatagaggatcacacaattgatgtaacgaat
cagttagagtatttcacaaaaaatgataagcaaaaagaacaacaacaccatcgacattac
agaagaagagaacattacaacaggttttaa
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