Anopheles gambiae (malaria mosquito): 1278148
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Entry
1278148 CDS
T01036
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03020
RNA polymerase
aga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
1278148
09124 Replication and repair
03420 Nucleotide excision repair
1278148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aga03021
]
1278148
03400 DNA repair and recombination proteins [BR:
aga03400
]
1278148
Enzymes [BR:
aga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
1278148
Transcription machinery [BR:
aga03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
1278148
DNA repair and recombination proteins [BR:
aga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
1278148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3137
Motif
Other DBs
NCBI-GeneID:
1278148
NCBI-ProteinID:
XP_061516561
LinkDB
All DBs
Position
3:complement(1318083..1324826)
Genome browser
AA seq
1877 aa
AA seq
DB search
MSGESKAPLRLVKRVQFGILSPDEIRRMSVTEGGIQYAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPQNPKI
KEIVLKSKGQPRKRLAYVYDLCKGKKICEGGEDMDMSKEPTADGAKKQGHGGCGHYQPSI
RRTGLDLMAEWKDVNDENQEKKIQVSAERVYEILKHITDEECFVLGMDPKFARPDWMIIT
VLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNEATGAAAHVIAENIKMLQ
FHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPDP
NLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLRF
HPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSP
YNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKR
DVFIEKEQMMNLLMFLPTWDGKMPQPAILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHPD
EEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFYGN
IQTVVNNWLLLEGHSIGIGDTIADPQTYAEIQRAIKKAKEDVIGVIQKAHNMELEPTPGN
TLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQ
NVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDTA
VKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTIKL
SNKVFEKRYRFDPTNERTLRRIFNEDVIKELTETSSVIQEIEAEYEQLLRDREALRQIFP
NGDSKVVLPCNLQRMIWNVQKIFHINKRSPTDLSPLKVIQGVRDLLQRCVIVAGTDRLSK
QANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQCNPGEMVGALA
AQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARDA
EKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPWL
LRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNEDNKFQEN
EEENMDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITPEGEFKPI
GEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNNVLQFYGL
YVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDPM
RGVSENIILGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSILGGTGMFFGSAATPSMTPWQ
QSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYP
PSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSA
TQNYSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSP
SSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPK
YSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSI
GSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPA
SPTYSPTSPSYDDSNED
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaatcgaaggcgccattgcgcttggtcaagcgcgtacagttcggcatcctg
tcgccggacgaaatccgtcgtatgtcggtgacggagggcggcatacagtatgcggaaacg
atggaaggtggccggccgaagctgtgcggcctgatggacccacggcagggtgtgatcgag
cgtacgtcccggtgtcaaacgtgcgcgggtaacatgaccgaatgcccgggccactttggg
catatcgatctggccaaaccggtgtttcacatcggcttcatcacgaagacgatcaaaata
ttgcgctgcgtgtgtttctactgctccaagatgctcgtgtcgccacagaacccaaagatc
aaggagatcgtcctgaagtcgaagggccagccccgcaagcgcctcgcctatgtgtacgat
ctgtgcaagggaaagaaaatctgcgaaggcggtgaagacatggacatgtccaaggagcca
acggcggacggtgcgaagaagcagggccacggcggttgcggtcactaccagccatcgatc
cgacgtaccggcctggatctgatggccgagtggaaggatgtaaacgacgagaaccaggag
aaaaagattcaggtttcggccgagcgggtgtatgaaattctgaagcacattaccgacgaa
gagtgtttcgtgctcggcatggatccaaagtttgcgcgtcccgattggatgatcatcacc
gtgctgccggtaccgccgctggccgtccggcccgccgtcgtgatgttcggcgcaaccaag
aatcaggacgatttaacgcacaaactgtccgacatcatcaaggcgaacaacgagctgaag
aagaacgaagctaccggggcggccgcgcacgtcattgcggaaaacatcaaaatgctgcag
ttccatgtggccacgctggtcgacaacgatatgcccggtatgccgaaagcgatgcagaag
agtggcaaaccgctcaaagcgatcaaggcgcgtctgaagggaaaggaaggccgtattcgc
ggtaacttgatgggtaagcgtgtcgatttctcggcccgtaccgtcattacgcccgatccg
aacctgcgcatcgatcaggtcggcgttccacgctccgtagcgcagaacatgaccttcccc
gagctggtgacgccgttcaacatcgatcggatgcaggagctggtacgtcgcggtaactca
cagtacccgggcgccaagtacattgtgcgcgacaatggcgagcgaatcgatctgcggttt
catccgaagtcgtccgatctgcatctgcagtgcgggtacaaggtggagcgccatctgcgc
gacgacgatctggtcattttcaaccgtcagcccacgctacacaaaatgagtatgatgggg
catcgggtgaaggtgttgccgtggtccacgtttcggatgaatcttagctgcacctcgccg
tacaacgccgatttcgacggtgacgagatgaacctgcacgtgccgcagtcgatggagacg
cgggcggagatcgaaaacattcacatcactccgcgccagatcattacgccgcaggccaac
aaacccgtcatgggtattgtgcaggacacgctgacggcggtgcggaagatgaccaagcgc
gacgttttcatcgagaaggagcagatgatgaacctgctcatgttcttgccaacatgggac
ggtaaaatgccccagcccgccattctcaagccgaagccgctgtggacgggcaagcagatc
tttaccctcatcatccccggcaacgtgaacatgatccgcacgcattccacccacccggac
gaggaggacgatggaccgtacaagtggatctcgcccggcgacacgaaggtcatggtcgag
cacggcgatctgatcatgggcatcctgtgcaagaaaacgctcggtacgtcggctgggtcg
ctgctgcatatcgtgttcctggagctggggcacgaaattgccggccggttttacggcaac
atccagacggtcgtcaacaactggctgttgttggagggtcatagtatcggtatcggtgac
accattgccgatccgcagacgtacgccgaaatccagcgcgccattaagaaggccaaggag
gacgtgataggcgtgatccagaaggcgcacaacatggagctggaaccgacgcccggtaac
acgctgcgacagacgttcgagaatcaggtgaaccgtatcctgaacgatgctcgtgacaaa
actggtggttccgccaagaagtcgcttaccgagtacaacaacctgaaggctatggtcgtt
tccggttccaagggatccaacattaacatttctcaggttattgcttgtgtaggccaacag
aacgtcgagggtaagcgcattccgttcggtttccgcaaacgcacactgccgcacttcatc
aaggacgattacggtcccgagtctcgtgggttcgtggaaaattcgtaccttgccgggctg
acgccgaccgagttctacttccacgccatgggtggtcgtgaaggtttgattgatactgcc
gtcaaaacggccgaaaccggttacatccagcgtcgtttgatcaaggctatggagtccgtg
atggtcaactacgacggcacggtgcgtaattcggtggggcagctgattcagctgcgttac
ggcgaggacggtctgtgcggagagacggtcgagttccagaacctgccaacgatcaagctc
tcgaacaaggtgttcgagaagcggtaccgcttcgatccgaccaacgagcgtacgctgcgg
cggattttcaacgaggatgtcatcaaggagctgaccgaaacgtcgtccgtcattcaggag
attgaggccgagtacgagcagctgttgcgcgatcgtgaagcactgcgacagatcttcccg
aacggcgactcgaaggtcgtactgccctgcaatctgcagcgcatgatctggaatgtgcag
aagattttccacatcaacaaacgctcgccgacggatctgtcgccgctgaaggtgatccag
ggcgtgcgagatctgctgcaacgttgcgtgatcgtggccggcacggatcggctgtcgaag
caggccaacgagaacgcgacgctgctgttccagtgtctggtgcgttcgacgctctgcaca
aaatacgtggccgaggagttccggctgaacaacgaagcgttcgagtggttgatcggtgaa
atcgagacgcgcttccagcaggctcagtgtaacccgggcgagatggtcggtgcgttggcg
gcccagtcgctcggcgagccggccacacagatgacgctgaacacgttccactttgccggt
gtgtcgtccaagaacgtaacgctcggcgtgccacgtttgaaggaaattatcaacatttcc
aagcgtcccaaggcgccttcgctgaccgtcttcctgacgggcggagcggcccgtgacgcc
gaaaaggccaagaacgtgctgtgccgtttggagcacacgacactgcgtaaggtgacggcc
aacacggccatctactacgatcccgatccgcagcgtacggtcattgccgaggatcaggag
tttgtgaacgtgtactacgaaatgcctgactttgacccgacgcgcatttccccgtggttg
ctgcgtatcgagctggaccgtaagcgaatgacggacaaaaagctgaccatggaacagatc
gcggagaagatcaatgccggtttcggcgacgacttgaactgcatcttcaacgacgacaat
gcggacaagcttgtgctgcgcatccgtatcatgaacgaggacaacaaattccaggagaac
gaggaggaaaacatggacaagatggaggacgacatgttcctgcggtgtatcgaggcgaac
atgctgtcggacatgacgctgcagggcatcgaagcgatcggcaaggtgtacatgcatctg
ccgcaaaccgatgcgaagaagcgtatcgtcatcacgcccgagggtgagttcaagccgatc
ggcgaatggttgctggaaacggacggtacctccatgatgaaggtgctgagcgagcgggac
gtcgatccggtgcgcacgtacagtaacgacatctgtgagatcttctccgtgctgggcatc
gaagccgtgcgaaagtcggtcgagaaggaaatgaacaacgtgctgcagttctacggtctt
tacgtgaactaccgacatctggccctgctgtgtgatgtcatgacggcgaagggtcatttg
atggccatcactcgacacggcattaaccgacaggacacgggtgcgctgatgagatgttcg
ttcgaggaaacggttgacgtgttgaacgatgcagcggcccacgcggaggtcgatccgatg
cgtggcgtgtcggagaacatcatcctcggccagctgccccgaatgggaaccggttgtttc
gatttgctgctggacgcagagaaatgcaagctgggtatggaaattccgcacacctcgata
ctgggtggcacgggaatgttcttcggttcggcggcgacaccaagcatgacaccgtggcaa
cagtcggccacccccggctacggtggatggtctccatccggcccggccagtggcatgacg
cccggtgggcccagcttctcgccatcggcacagtcggacgcatcgggaatgtctccctcg
tcctggtccccgattcgaggatcacccagctctcccggtccatcgatgtcgccgtacccg
ccgtcgtcgccatcaatgtcaccgtcctactcgccgagcagtccgaactacgcgccgaac
tcaccgggcggtgcgtcgccatcgtactctccgaccagccctggctattcgccaccgagc
ccacagtattcgccgggcagctcgaactactccccaagcagccccaacatccactccgcg
acgcaaaactattcgcccacgtcgccaagctattcgccgatgtctcccatgcatccgacg
agcgcatccaactttgccagcccgggctactccccgacgagtccgtcgtattcgccgacc
tcgcccagctattcaccttcctctcccgtcttttcaccgaccagtccgtcgtactcaccg
tcgagcccttcgtactccccgaccagcccgtcctactcaccgacaagcccatcctactca
ccaacatcgcccaactttactcccgttacaccgtcctactccccgtcgagcccgaactat
tcgcccacctcaccgcactactctccagcatctcccagctactcgccttcctcaccgaaa
tattctcccacatcgccgagctactcgcccacctcaccgtcgtacatcggcagtccgcac
tacacacccgccagcccacagtacgggcaagcgagcccgaactattccccgacgtcgccc
agctactcgccctcttcgccgcagcactcgcctggcagcagcagcaaccactacagcatc
ggctcgtcgtcgtactcgcaaacgccggcaccgtactcgcccaacatgtcctcgtactcg
cccagcagtccgaagtactcgccgaccagcccggtctacacgtcgagctcgccgacctat
tcgccctcttcgccggcctattcaccgacaccgcagggttacagtccgtcgagcccggcc
agtcctacctactcgccgacgagtccgtcgtacgacgatagcaatgaggattaa
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integrated database retrieval system
