Anopheles gambiae (malaria mosquito): 1279988
Help
Entry
1279988 CDS
T01036
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
1279988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aga03019
]
1279988
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
1279988
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
1279988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
1279988
NCBI-ProteinID:
XP_061509109
LinkDB
All DBs
Position
3:complement(23998616..24008504)
Genome browser
AA seq
969 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQRE
KEEISTWLTSSITSLQIQIDQFECEVESLLAGKKKKLDKDKQDKMDELKGKLERHKFHVT
KLETLLRMLDNDGVEVEQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDDVEISGIP
VSTGTDSNNSNETAGSPSSLISGTSPAQSPVLNYSASTLHNHSSDLSADNNNLNEKRSKS
EGTKITPVKPTAIRASKVDPSVTAVSNAVNNNGSSSNSTSNNSSSTTISNNNTSKTGLIS
STPSKNHANAAAPLPTMLVLPQPPNSIPIIGPAFAAVAKQHPKNGSILQPSTPTTGAGAS
SASSTSGPLQTQAPNSSNVFSSLSQIINTSQTKLSQQQQQQTPSSLPSAAAVVAAANSSS
GGVPSSTQSNASSQQQQQAQQAQQQQQQAQQQQQIPPGQNSMLLHNALSSASSTESNNHV
MSTSSASTISSSGANVINNCVSPSNSAVSSRASPSLMSPPQQQQQQQQQQQQLLNGPTAL
AQEVINRTGVLETGPTANPNALMQQQQQQQQQSQQQQSSNTQGAAAVAAAAATTAQQAAA
AAAAAQASAFVAAAGQLQQQQQQQQQQQQQQQQQQQSQQQQPQPQPADSRQAGPVPSNQT
PQPQSGGGGGGGAGQSLMVDASGVPAGANAGNNLLPTSSATAAITNGPNTIINTNSSISN
AANVNSAGGGGGGGPGGMKPSAGTHEACIPPLLGVAPLGTSKLQKEHQIQFQLMEAAYYH
LPTPSDSERLRPYLQRQPVQTPPHYPQQQLPHSETVEFFQRLSPETLFFVFYYMEGTKAQ
YLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEY
KYLEDRDLN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaatcgatcggtgcctgaagaaagtcactgag
ggtgtagaaacgttcgaagatatctggcagaaggttcacaatgctaccaacagcaatcaa
aaggaaaagtatgaagcagatctcaagaaggaaattaaaaagctgcagcggttgcgcgat
caaatcaaatcatggatcgcatccggcgagatcaaggataaaagcgctctgctggaaaac
cgtcggctcatagaaacccaaatggagcggtttaaggtggtcgaacgggaaacgaaaacg
aaagcctactcgaaggagggccttggcgcggcccagaagatggatccggcgcagcgggaa
aaggaagagattagcacgtggctaacgtcgtccattacctcgctgcagatacagatcgat
cagttcgagtgtgaggtggagtcgctgctcgccggcaagaagaaaaagctcgacaaggac
aagcaggacaagatggacgagctgaagggcaagctggagcggcacaagttccacgtcacg
aagctggagacgctgctgcggatgctcgacaacgacggcgtcgaggtggagcagatcaag
aagatcaaggaggacgtcgagtactacatcgactcgtcgcaggagcccgacttcgaggag
aacgagtacatctacgacgatatcatcgggctggatgacgtggaaatctctggcatcccg
gtgtcgaccggtacggatagcaataacagcaacgagacggcaggttcgccaagcagtcta
atatcgggaactagtccggcgcagtcaccggtgctaaactacagtgccagcacgttacac
aatcacagtagcgatctgtccgccgataacaacaatctgaatgagaagcgttcgaagagc
gagggcacgaagattacgccggtgaaaccgaccgcaatccgcgctagcaaggtggacccg
tccgtcaccgctgtcagcaatgccgtcaacaataacggcagtagcagcaatagcaccagt
aataatagtagtagtaccactattagcaacaacaatacgtccaagaccgggctaatcagc
tcgacgccgagcaaaaaccacgcgaatgctgccgcgccgctacccaccatgctggtgcta
ccgcagccgcccaacagtataccgatcatcgggcccgcttttgctgccgttgcaaaacaa
catcccaaaaatggttctatactccaacccagcacgcccacgacgggtgctggcgcatcg
tccgcatcgtcgacaagcgggccactgcaaacgcaagcaccgaattcatcgaatgtcttt
agcagcctcagtcagattattaatacatctcaaactaagcttagtcagcagcagcagcag
caaacgccgagtagtctaccgagtgctgcagccgttgtcgccgccgcgaatagcagtagt
ggtggtgtgccgtcttcgacacagtcgaacgcatcttcacaacagcagcagcaggcgcag
caggcgcagcaacagcagcagcaagcgcagcagcagcagcagattcctcccggtcagaat
tccatgctacttcacaatgccctgtcgtcggcatcgagtacggagagcaacaatcatgta
atgagtacatcgtccgcgtctaccatcagtagtagcggggcgaacgttattaataactgt
gtctctcccagcaattccgcagtcagtagcagagcgtcacctagcttgatgtcacctccg
cagcagcaacagcaacagcagcagcagcagcaacagttgttgaacggtcccacagcactc
gcgcaagaagtgataaatagaacgggagttctcgaaacgggcccaaccgccaacccgaac
gcgttaatgcagcagcaacagcagcagcagcagcagagccaacagcaacaatcgtcgaat
acccagggtgcagcggcggtcgcggcagccgcagccaccactgcgcaacaagctgcagct
gcagcagcagcagcacaagcatccgcatttgtcgcggcagctggtcagctacagcagcag
cagcaacaacagcagcagcaacagcaacaacaacagcagcagcaacaatcgcaacagcag
caaccacaaccacagccagcagattcgagacaggctgggccagttccttcgaatcaaaca
ccccaaccacagtccggtggcggtggcggcggcggcgccggccagtcgttaatggtcgac
gcgagcggcgtgccggcgggagccaacgcgggcaacaacctgttgccgacgtcatcggct
actgccgccatcacgaacggaccgaacacgatcatcaacactaactctagtatttcgaac
gccgccaacgtgaacagtgctggtggcggtggcggcggcggccccggaggcatgaagccg
tcggccggtacgcacgaggcctgcataccgccgctactcggcgtggcaccgctgggcacg
tccaagctgcagaaggagcatcaaatacaattccaactcatggaagccgcctactatcat
ctgccaacaccaagcgattcagagaggctaaggccgtacttgcaacgtcaacctgttcaa
actccaccgcactatccacagcaacaacttccacattctgaaacggttgagtttttccag
cgtctgtcacccgaaacgctcttcttcgtgttttactacatggagggaacgaaggctcaa
tatctagccgcgaaggcgctgaaaaagcagagctggagatttcatacgaaatatatgatg
tggtttcaacgccacgaagaaccgaaagtgatcaacgaagaatacgagcagggaacctac
atctattttgactatgaaaaatggggccagcgtaaaaaggaagggtttacgtttgaatac
aagtacttagaagacagggacctgaattga
DBGET
integrated database retrieval system
