Anopheles gambiae (malaria mosquito): 1280160
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Entry
1280160 CDS
T01036
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga04382
Cornified envelope formation
aga04512
ECM-receptor interaction
aga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
1280160
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
1280160
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
1280160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aga04147
]
1280160
00536 Glycosaminoglycan binding proteins [BR:
aga00536
]
1280160
Exosome [BR:
aga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
1280160
Glycosaminoglycan binding proteins [BR:
aga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
1280160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
1280160
NCBI-ProteinID:
XP_061513844
UniProt:
A0A1S4H159
LinkDB
All DBs
Position
3:complement(28328203..28340411)
Genome browser
AA seq
1778 aa
AA seq
DB search
MGTRIKWLVTTSLVVWFGQQTYAQFWASSNNNDNSGVGLFKRQEQEYPRQLAPQIDPSYS
IMDTASGPQGPPGKNCTSGGCCLPKCFAEKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEK
GTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLS
GLPGNPGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFP
GRPGEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGE
PGEPGRSGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGL
HGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG
FDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEG
LRGEPGQPGYGIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRD
GEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGER
GYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEKGEN
GLMGIKGEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG
EPGLKGNVGYSGDKGDKGYSGLKGEPGRCASIPPNLEEAIRGPPGTQGEKGAPGIQGIRG
DKGEMGEQGRTGMQGNAGPPGAPGPVGPRGLTGLRGEKGNTGPLGPPGAPGRDGMPGAPG
LPGSKGGKGDPGLSMVGPPGPKGNPGLRGPKGDRGGMGDRGDPGQPGSVGYPGEKGDLGI
PGQPGFPGEVGPKGEPGPKGPAGHPGAPGRPGMDGVKGLAGLKGDVGAPGVIGLPGQKGE
MGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGAKGEPGEKGDRGEIGMKGLMGQTGPPGM
LGPKGDKGLAGLPGPACLPGLSGEKGDKGYTGPEGPPGEPGAASEKGQKGEPGVPGLRGN
DGLPGLEGPSGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVPGFPGVK
GDKGTTGLPGVPGAPCMDGLPGAEGPAGPRGYDGEKGFKGEPGRIGERGELGEKGDQGLM
GPVGLMGRKGDRGVPGSPGLPATAAAIKGDKGEPGFPGAIGRPGKVGAPGLPGDMGTKGE
MGIQGLPGLPGPAGLNGLPGMKGDMGPMGEKGDSCPVVKGEKGLPGRPGKMGRDGPPGLL
GEKGDKGLSGLPGPMGPPGPPGPLGRQGEKGDRGDSGLMGRPGKDGLPGPQGQRGLPGPQ
GEKGDQGPPGFIGPKGERGERGRDGMNGLNGPQGLKGDRGMPGLEGVAGLPGMVGEKGDR
GLPGMAGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGMPGLAGPAGIPGAPG
APGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDCESAPYYTGILLV
RHSQSDEVPMCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPVLACGQNN
ICNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECP
NGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTS
FWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRR
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttagtcactacctcgctggtagtttggttcggacaacag
acgtacgcgcaattctgggcgtccagcaacaacaatgacaactccggcgtcggactgttt
aagcgacaggagcaggaatatccacgacagctagcgccacagatcgacccgagctacagc
ataatggacacggccagcggaccacagggaccaccgggcaagaactgcacctccggcggc
tgctgcttgccgaaatgtttcgccgaaaagggcaaccgcggcctgcccggaccgatgggg
ctgaagggtgcgaagggtgtgcgcgggttccccgggtcggagggtttgccgggcgagaag
ggcaccaagggcgagccgggcccggtcgggctgcagggcccgaagggcgaccggggccgg
gacggtttgcccggctacccgggcatccccggcacgaacggtgtgccgggtgtgccggga
gcacccggtctggccggtcgggacggttgcaacggcacggacggtctgcccggtttgtcc
gggctgccgggaaatccgggcccccgcggttacgccggcatccccggcacaaagggcgag
aagggcgaaccggcgcggcatccggagaactacaacaagggccagaagggcgagccgggc
aacgatggactggaaggactgccggggccgcagggcgaggtaggaccgcgcggtttcccc
ggccgacccggcgaaaagggtgtccccggtacgcccggtgtgcggggcgagcggggcgac
aaaggcgtgtgcatcaagggcgagaagggccagaagggcgcgaagggcgaggaggtgtac
ggcgccacgggcacgacgacgacgaccggaccgaagggcgagaagggcgaccgcggcgag
ccgggcgaaccgggccgatccggcgagaagggacaggccggcgaccgggggcaggtgggc
gagcgaggccacaagggcgagaagggtttgcctggacagccgggcccgcgagggcgcgac
ggtaactttggaccggtgggcctgcccggccagaagggtgaccgcggctcggaaggactg
cacggactgaagggccagagcggaccgaagggtgagccgggccgggacggcattccgggc
cagcccggtattgctgggccggccggtgcgcccggcggcggcgaaggacgacccggcgcg
cccggtccgaagggaccgcgcggctacgaaggaccgcagggcccgaagggcatggacgga
ttcgacggagaaaagggcgagcggggacagatgggcccgaagggcggccagggtgtgcct
ggccggcccggtcccgaaggtatgccgggcgacaagggcgacaaaggcgagtcgggatcg
gtcggtatgccgggaccgcagggcccgcgcggctaccctggccagcccggacccgagggt
ctgcgcggtgagccgggccagccgggctatggcattcctggacagaagggtaatgccggt
atggctggattccccggactgaagggacagaaaggcgagcgtggcttcaagggtgtgatg
ggtacgcccggtgacgcaaaggaaggacgcccgggagcgccaggactaccaggacgtgat
ggcgaaaagggcgaacccggccgtccgggactccccggagcgaagggcgagcgcggtctt
aagggagagctcggtggacgctgtacggactgccggcccggaatgaagggcgacaaaggc
gaacgcggttatgccggcgaaccaggccgcccgggagcgagcggtgtgccaggcgaacga
ggataccccggtatgccgggcgaggacggaacaccaggactgcgcggagaaccaggcccc
aagggagagccgggtctgctcggtcccccgggcccatcgggagagccgggtcgcgatgcc
gaaattccaatggaccagttgaaacccatcaagggcgacaagggcgaaaagggggaaaat
ggcctgatgggcatcaagggcgagaaaggattccccggaccggtcggaccggagggcaag
atgggactgcgcggcatgaagggcgacaagggacgaccgggcgaggcgggcattgacgga
gcgcccggcgcgccgggcaaggacggtctgcctggccggcacggacaaacggtcaagggt
gaaccggggctgaagggtaacgtaggctactcgggcgacaagggcgacaagggctactcc
gggctgaagggtgagccgggccggtgcgccagcattccgccgaacctcgaggaagcgatc
cgtggaccgccaggcacgcagggcgagaagggcgcccccggcattcagggaattcgcggc
gacaagggcgaaatgggcgagcagggacggacgggcatgcagggtaatgctgggccgccg
ggagcacccgggccggtaggaccgcgcggactgacgggactgcggggcgaaaagggtaat
acgggaccgctgggaccaccgggtgcgcctggccgcgacggtatgcccggagcaccggga
ctgcccggctcgaagggtggcaagggtgatccgggtctatcgatggtgggtccgcccggc
ccgaagggtaacccgggcctgcgaggaccgaagggcgatcggggcggcatgggcgatcgg
ggcgatccgggacaacccggctccgtgggctatccgggcgaaaagggcgatttgggcatt
ccaggacagcctggcttcccgggcgaagtgggaccgaaaggtgagccaggaccgaaggga
ccggcgggacatccgggcgcaccgggccgacccggtatggacggtgtgaagggtttggcc
ggtctgaagggtgacgttggcgcaccgggcgtgatcggcctgcccggccagaagggcgaa
atgggccaggcgggtaacgatgggctgaagggcttccagggccgcaagggtatgatggga
gcgccgggcattcagggcgtacggggtccgcagggtgcgaagggcgaaccgggcgaaaag
ggcgatcggggcgaaatcggcatgaagggactgatgggtcagacgggcccgcccggtatg
ctcggaccgaagggagacaagggtctggccgggctgccgggaccggcctgtctgcccgga
ctgtcgggcgaaaagggcgacaagggatacactggaccggagggaccgccgggcgaaccg
ggtgccgcgtcggagaagggccagaagggtgagccgggcgtaccgggactacgcggtaac
gacggattgcccgggctggagggaccgtccggaccgaagggtgatgcgggcgtgcccggc
tacggtcgacctgggccgcagggcgaaaaaggtgacgttggcctgacgggcatcaatggg
ctgccgggcttgaacggggtgaagggcgacatgggcgtccctggattcccgggcgtgaag
ggcgacaagggtacgaccggattgccgggtgtgcctggtgcaccgtgcatggacggactg
cccggagcggaaggtcccgctggtccgcgcggatacgacggcgagaagggcttcaagggc
gaaccgggccgcatcggcgagcggggcgaactgggcgaaaagggtgaccagggactaatg
gggccggtggggctgatgggacgcaagggcgaccgtggtgtgccgggttcgcccggtctg
ccagctacggcggccgccatcaagggcgacaagggtgaaccgggcttcccgggtgcgatc
ggacgcccgggcaaggtcggtgcgccgggcctgccgggcgacatgggcaccaagggcgag
atgggcatccaggggctgcccggactgcccggaccggccggactgaacgggctgccgggc
atgaagggcgacatgggaccgatgggcgaaaagggcgactcctgtccggtggtgaagggc
gaaaagggtctgccgggccggccgggcaagatgggccgcgacgggccgcccggcctgctg
ggcgaaaagggcgacaaaggactgtctggcctgcccggaccgatgggaccgcccggaccg
cccggcccgcttgggcggcagggcgaaaagggtgaccgaggcgattccggtttgatgggc
cgccccggcaaggacggactgcccggaccgcagggccagcgagggctgccgggaccgcag
ggcgaaaagggcgaccaggggccgccagggtttatcggaccgaagggcgagcggggcgaa
cggggccgggacggaatgaacgggctgaacgggccgcagggactgaagggtgaccggggc
atgccgggactggagggcgtggccggtctgcccggtatggtgggcgagaagggtgaccgc
ggtctgcccggtatggccggcctgaacggtgcgccgggcgagaagggccagaagggtgag
acgccacagctgcccccgcagcgcaagggaccgcccggaccgcccggattcaacggaccg
aagggtgacaagggcatgccagggttggccggaccggccggcattccgggcgctcccggt
gcgccgggcgagatgggactgcgcggattcgagggcgcgcgcggcctgcagggactgcgc
ggtgacgttggacccgagggacggcccggacgcgacggtgcgccgggtctgcccgggccg
aagggtgagccgggccgggactgcgagtcggcaccgtactacaccggcatcctgctggtg
cggcacagccagtcggacgaggtgccgatgtgcgagccgggccatctgaagctgtgggac
ggctactcgctgctgtacgtcgacggcaatgactacccgcacaaccaggacctcggttcg
gccggttcctgcgtgcgcaagttctccacgctgcccgtgttggcctgcggacagaacaac
atctgcaactacgcgtcccgcaacgatcggacattctggctgtcgacgtccgcgccgatt
ccgatgatgccggtgaccgagaacgagatgcgcccgtacatctcgcggtgcacggtctgt
gaggcaccgaccaacgtgatcgcggtgcacagccagacgctccatattccggaatgtccg
aacggatgggacggtctatggattggctacagtttcctaatgcacactgccgtcggccac
ggtggcggtggccagtcactgtccgggccgggctcgtgcctggaggacttccgcgccaca
ccgttcattgagtgtaacggtggcaagggccactgccattactacgaaacgcaaacctcc
ttctggctggtttcgctcgaggaccaccagcagttccagcggccggagcagcaaacgctc
aaggccggcaacctgcttagccgagtatctcggtgccaggtgtgcatccgccgctga
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