Anopheles gambiae (malaria mosquito): 1280160
Help
Entry
1280160 CDS
T01036
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga04512
ECM-receptor interaction
aga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
1280160
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
1280160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aga04147
]
1280160
00536 Glycosaminoglycan binding proteins [BR:
aga00536
]
1280160
Exosome [BR:
aga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
1280160
Glycosaminoglycan binding proteins [BR:
aga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
1280160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
1280160
NCBI-ProteinID:
XP_061513844
UniProt:
A0A1S4H159
LinkDB
All DBs
Position
3:complement(28328203..28340411)
Genome browser
AA seq
1778 aa
AA seq
DB search
MGTRIKWLVTTSLVVWFGQQTYAQFWASSNNNDNSGVGLFKRQEQEYPRQLAPQIDPSYS
IMDTASGPQGPPGKNCTSGGCCLPKCFAEKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEK
GTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLS
GLPGNPGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFP
GRPGEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGE
PGEPGRSGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGL
HGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG
FDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEG
LRGEPGQPGYGIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRD
GEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGER
GYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEKGEN
GLMGIKGEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG
EPGLKGNVGYSGDKGDKGYSGLKGEPGRCASIPPNLEEAIRGPPGTQGEKGAPGIQGIRG
DKGEMGEQGRTGMQGNAGPPGAPGPVGPRGLTGLRGEKGNTGPLGPPGAPGRDGMPGAPG
LPGSKGGKGDPGLSMVGPPGPKGNPGLRGPKGDRGGMGDRGDPGQPGSVGYPGEKGDLGI
PGQPGFPGEVGPKGEPGPKGPAGHPGAPGRPGMDGVKGLAGLKGDVGAPGVIGLPGQKGE
MGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGAKGEPGEKGDRGEIGMKGLMGQTGPPGM
LGPKGDKGLAGLPGPACLPGLSGEKGDKGYTGPEGPPGEPGAASEKGQKGEPGVPGLRGN
DGLPGLEGPSGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVPGFPGVK
GDKGTTGLPGVPGAPCMDGLPGAEGPAGPRGYDGEKGFKGEPGRIGERGELGEKGDQGLM
GPVGLMGRKGDRGVPGSPGLPATAAAIKGDKGEPGFPGAIGRPGKVGAPGLPGDMGTKGE
MGIQGLPGLPGPAGLNGLPGMKGDMGPMGEKGDSCPVVKGEKGLPGRPGKMGRDGPPGLL
GEKGDKGLSGLPGPMGPPGPPGPLGRQGEKGDRGDSGLMGRPGKDGLPGPQGQRGLPGPQ
GEKGDQGPPGFIGPKGERGERGRDGMNGLNGPQGLKGDRGMPGLEGVAGLPGMVGEKGDR
GLPGMAGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGMPGLAGPAGIPGAPG
APGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDCESAPYYTGILLV
RHSQSDEVPMCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPVLACGQNN
ICNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECP
NGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTS
FWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRR
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttagtcactacctcgctggtagtttggttcggacaacag
acgtacgcgcaattctgggcgtccagcaacaacaatgacaactccggcgtcggactgttt
aagcgacaggagcaggaatatccacgacagctagcgccacagatcgacccgagctacagc
ataatggacacggccagcggaccacagggaccaccgggcaagaactgcacctccggcggc
tgctgcttgccgaaatgtttcgccgaaaagggcaaccgcggcctgcccggaccgatgggg
ctgaagggtgcgaagggtgtgcgcgggttccccgggtcggagggtttgccgggcgagaag
ggcaccaagggcgagccgggcccggtcgggctgcagggcccgaagggcgaccggggccgg
gacggtttgcccggctacccgggcatccccggcacgaacggtgtgccgggtgtgccggga
gcacccggtctggccggtcgggacggttgcaacggcacggacggtctgcccggtttgtcc
gggctgccgggaaatccgggcccccgcggttacgccggcatccccggcacaaagggcgag
aagggcgaaccggcgcggcatccggagaactacaacaagggccagaagggcgagccgggc
aacgatggactggaaggactgccggggccgcagggcgaggtaggaccgcgcggtttcccc
ggccgacccggcgaaaagggtgtccccggtacgcccggtgtgcggggcgagcggggcgac
aaaggcgtgtgcatcaagggcgagaagggccagaagggcgcgaagggcgaggaggtgtac
ggcgccacgggcacgacgacgacgaccggaccgaagggcgagaagggcgaccgcggcgag
ccgggcgaaccgggccgatccggcgagaagggacaggccggcgaccgggggcaggtgggc
gagcgaggccacaagggcgagaagggtttgcctggacagccgggcccgcgagggcgcgac
ggtaactttggaccggtgggcctgcccggccagaagggtgaccgcggctcggaaggactg
cacggactgaagggccagagcggaccgaagggtgagccgggccgggacggcattccgggc
cagcccggtattgctgggccggccggtgcgcccggcggcggcgaaggacgacccggcgcg
cccggtccgaagggaccgcgcggctacgaaggaccgcagggcccgaagggcatggacgga
ttcgacggagaaaagggcgagcggggacagatgggcccgaagggcggccagggtgtgcct
ggccggcccggtcccgaaggtatgccgggcgacaagggcgacaaaggcgagtcgggatcg
gtcggtatgccgggaccgcagggcccgcgcggctaccctggccagcccggacccgagggt
ctgcgcggtgagccgggccagccgggctatggcattcctggacagaagggtaatgccggt
atggctggattccccggactgaagggacagaaaggcgagcgtggcttcaagggtgtgatg
ggtacgcccggtgacgcaaaggaaggacgcccgggagcgccaggactaccaggacgtgat
ggcgaaaagggcgaacccggccgtccgggactccccggagcgaagggcgagcgcggtctt
aagggagagctcggtggacgctgtacggactgccggcccggaatgaagggcgacaaaggc
gaacgcggttatgccggcgaaccaggccgcccgggagcgagcggtgtgccaggcgaacga
ggataccccggtatgccgggcgaggacggaacaccaggactgcgcggagaaccaggcccc
aagggagagccgggtctgctcggtcccccgggcccatcgggagagccgggtcgcgatgcc
gaaattccaatggaccagttgaaacccatcaagggcgacaagggcgaaaagggggaaaat
ggcctgatgggcatcaagggcgagaaaggattccccggaccggtcggaccggagggcaag
atgggactgcgcggcatgaagggcgacaagggacgaccgggcgaggcgggcattgacgga
gcgcccggcgcgccgggcaaggacggtctgcctggccggcacggacaaacggtcaagggt
gaaccggggctgaagggtaacgtaggctactcgggcgacaagggcgacaagggctactcc
gggctgaagggtgagccgggccggtgcgccagcattccgccgaacctcgaggaagcgatc
cgtggaccgccaggcacgcagggcgagaagggcgcccccggcattcagggaattcgcggc
gacaagggcgaaatgggcgagcagggacggacgggcatgcagggtaatgctgggccgccg
ggagcacccgggccggtaggaccgcgcggactgacgggactgcggggcgaaaagggtaat
acgggaccgctgggaccaccgggtgcgcctggccgcgacggtatgcccggagcaccggga
ctgcccggctcgaagggtggcaagggtgatccgggtctatcgatggtgggtccgcccggc
ccgaagggtaacccgggcctgcgaggaccgaagggcgatcggggcggcatgggcgatcgg
ggcgatccgggacaacccggctccgtgggctatccgggcgaaaagggcgatttgggcatt
ccaggacagcctggcttcccgggcgaagtgggaccgaaaggtgagccaggaccgaaggga
ccggcgggacatccgggcgcaccgggccgacccggtatggacggtgtgaagggtttggcc
ggtctgaagggtgacgttggcgcaccgggcgtgatcggcctgcccggccagaagggcgaa
atgggccaggcgggtaacgatgggctgaagggcttccagggccgcaagggtatgatggga
gcgccgggcattcagggcgtacggggtccgcagggtgcgaagggcgaaccgggcgaaaag
ggcgatcggggcgaaatcggcatgaagggactgatgggtcagacgggcccgcccggtatg
ctcggaccgaagggagacaagggtctggccgggctgccgggaccggcctgtctgcccgga
ctgtcgggcgaaaagggcgacaagggatacactggaccggagggaccgccgggcgaaccg
ggtgccgcgtcggagaagggccagaagggtgagccgggcgtaccgggactacgcggtaac
gacggattgcccgggctggagggaccgtccggaccgaagggtgatgcgggcgtgcccggc
tacggtcgacctgggccgcagggcgaaaaaggtgacgttggcctgacgggcatcaatggg
ctgccgggcttgaacggggtgaagggcgacatgggcgtccctggattcccgggcgtgaag
ggcgacaagggtacgaccggattgccgggtgtgcctggtgcaccgtgcatggacggactg
cccggagcggaaggtcccgctggtccgcgcggatacgacggcgagaagggcttcaagggc
gaaccgggccgcatcggcgagcggggcgaactgggcgaaaagggtgaccagggactaatg
gggccggtggggctgatgggacgcaagggcgaccgtggtgtgccgggttcgcccggtctg
ccagctacggcggccgccatcaagggcgacaagggtgaaccgggcttcccgggtgcgatc
ggacgcccgggcaaggtcggtgcgccgggcctgccgggcgacatgggcaccaagggcgag
atgggcatccaggggctgcccggactgcccggaccggccggactgaacgggctgccgggc
atgaagggcgacatgggaccgatgggcgaaaagggcgactcctgtccggtggtgaagggc
gaaaagggtctgccgggccggccgggcaagatgggccgcgacgggccgcccggcctgctg
ggcgaaaagggcgacaaaggactgtctggcctgcccggaccgatgggaccgcccggaccg
cccggcccgcttgggcggcagggcgaaaagggtgaccgaggcgattccggtttgatgggc
cgccccggcaaggacggactgcccggaccgcagggccagcgagggctgccgggaccgcag
ggcgaaaagggcgaccaggggccgccagggtttatcggaccgaagggcgagcggggcgaa
cggggccgggacggaatgaacgggctgaacgggccgcagggactgaagggtgaccggggc
atgccgggactggagggcgtggccggtctgcccggtatggtgggcgagaagggtgaccgc
ggtctgcccggtatggccggcctgaacggtgcgccgggcgagaagggccagaagggtgag
acgccacagctgcccccgcagcgcaagggaccgcccggaccgcccggattcaacggaccg
aagggtgacaagggcatgccagggttggccggaccggccggcattccgggcgctcccggt
gcgccgggcgagatgggactgcgcggattcgagggcgcgcgcggcctgcagggactgcgc
ggtgacgttggacccgagggacggcccggacgcgacggtgcgccgggtctgcccgggccg
aagggtgagccgggccgggactgcgagtcggcaccgtactacaccggcatcctgctggtg
cggcacagccagtcggacgaggtgccgatgtgcgagccgggccatctgaagctgtgggac
ggctactcgctgctgtacgtcgacggcaatgactacccgcacaaccaggacctcggttcg
gccggttcctgcgtgcgcaagttctccacgctgcccgtgttggcctgcggacagaacaac
atctgcaactacgcgtcccgcaacgatcggacattctggctgtcgacgtccgcgccgatt
ccgatgatgccggtgaccgagaacgagatgcgcccgtacatctcgcggtgcacggtctgt
gaggcaccgaccaacgtgatcgcggtgcacagccagacgctccatattccggaatgtccg
aacggatgggacggtctatggattggctacagtttcctaatgcacactgccgtcggccac
ggtggcggtggccagtcactgtccgggccgggctcgtgcctggaggacttccgcgccaca
ccgttcattgagtgtaacggtggcaagggccactgccattactacgaaacgcaaacctcc
ttctggctggtttcgctcgaggaccaccagcagttccagcggccggagcagcaaacgctc
aaggccggcaacctgcttagccgagtatctcggtgccaggtgtgcatccgccgctga
DBGET
integrated database retrieval system