Anopheles gambiae (malaria mosquito): 1280516
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Entry
1280516 CDS
T01036
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03022
Basal transcription factors
aga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
1280516
09124 Replication and repair
03420 Nucleotide excision repair
1280516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aga03021
]
1280516
03400 DNA repair and recombination proteins [BR:
aga03400
]
1280516
Enzymes [BR:
aga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
1280516
Transcription machinery [BR:
aga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
1280516
DNA repair and recombination proteins [BR:
aga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
1280516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
1280516
NCBI-ProteinID:
XP_061513374
LinkDB
All DBs
Position
3:95517626..95520409
Genome browser
AA seq
818 aa
AA seq
DB search
MGPPKKSSKKDKSGSGSGSASGFVENKWNKKRRTEDEAYAAFADDDDSNLGESDFVPDAA
TKNAEKNDDAIQEDEYGAKDYRSQMELKPDNESRPLWVAPNGHIFLESFSPVYKHAHDFL
IAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTTIPEGIVEFIRLCT
LSYGKVKLVLKHNKYFVESPHPEVLQKLLKDPVIQSCRLRRTEEEGGDGFIKQTLEKGKG
ITAFGQTKLAPGQTALPAPGVTTTETGEKLAEGGETVTEEAAVPEDITNFYDKMDNEEEE
EEANLNTVSFEVNQEKIEVLQKRCIEIEFPLLAEYDFRNDTINADINIDLKPAAVLRPYQ
EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKM
WSTADDSMICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVL
DEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRG
YIARVQCAEVWCPMAPEFYREYLIAKTSKKMLLYVMNPAKFRACQYLIRYHEKRGDKTIV
FSDNVFALKHYAIKMNKPYIYGPTSQNERIQILQNFKFNPKVNTIFVSKVADTSFDLPEA
NVLIQISSHGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFL
VNQGYSYKVITHLAGMESDPDLFYKTREEQGQLLQQVLSATDMDCEDERMPGDGTGVPRP
GGSKRTGGLSSMAGADDAIYYERKKSAHQHPLFKKFRC
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccgaaaaagtcctccaaaaaggataaaagtggttccggatcgggcagtgcc
agtgggttcgtggagaacaagtggaacaaaaagcgacggacggaagatgaagcgtacgcc
gcgtttgcggacgacgacgacagcaacctgggcgagagtgacttcgtcccggatgcggcc
acgaagaatgcggaaaagaatgacgatgcgatccaggaggatgagtacggggcgaaggac
tatcggtcgcagatggagctgaagccggacaacgagtcccggccgctgtgggtcgcgccg
aacgggcacatcttcctggagtcgttctcgccggtgtacaagcacgcgcacgacttcctg
attgccatctcggaacctgtttgtcgcccggagcacatacacgagtataagctgaccgcg
tacagtctgtacgcggccgtgtcggtcggcctgcagacgcacgacattgtcgagtacttg
aagcgactcagcaaaacaaccattccggaaggtatcgtggagttcatccggctctgtacg
ctgtcgtacggtaaggtgaagctggtgctgaagcacaacaagtactttgtggagagtcca
catccggaagtgcttcagaagctgctgaaagatccggtcatacagtcgtgccgattgcgt
cgcactgaggaggaagggggcgatgggttcataaagcaaacactggagaaggggaaggga
ataacggcgttcggacagacgaagctagctcccggacaaactgcgctgccggcccccggg
gtaaccacaacggagacgggtgaaaaactcgcggaaggtggtgaaacggtcaccgaggaa
gcggccgtgccggaagatatcaccaacttttacgacaaaatggacaacgaagaggaagag
gaggaagcaaacctcaacacagtttcgttcgaggtgaaccaggaaaagattgaagtgctg
cagaagcgctgtattgagatcgagttcccgctgctggcggagtacgatttccgcaacgat
acgatcaacgccgacatcaacatcgacctgaagccggccgccgtgctgcgcccctaccag
gagaaaagtttgcgcaaaatgtttggcaacgggcgggcccgatccggagtgattgtgttg
ccgtgcggtgccggcaaatcgctggtcggcgtaacggcctgctgtacggtgcgcaagcgt
gccctcgtgctctgcaacagcggcgtgtcggtggagcagtggaagcaacagttcaagatg
tggtccacggcggacgacagtatgatctgtcggttcacgtccgaggcgaaggataaaccg
atgggttgtggcattctcgtgacgacctactccatgataacgcacacccagaagcgttcc
tgggaggcggaacagacgatgcgctggctgcaggagcaggagtggggcatcatggtgctg
gacgaggtgcacacgatcccggcgaaaatgttccgccgtgtgctgaccatcgtacagtcg
cactgtaagctcgggctgaccgcaacactgctgcgagaggacgacaaaattgccgacctt
aacttcctgatcggtccgaagctgtacgaagcgaactggttggagctgcagaagcgtggc
tacattgcccgggtccagtgcgctgaggtatggtgcccgatggcgcccgagttctaccgc
gagtatctcatcgcgaagacgtcgaaaaagatgctgctgtacgtgatgaacccggccaag
ttccgggcttgccagtacttgatacgctaccacgagaagcgcggcgacaaaacgatcgtc
ttcagcgacaacgtgtttgcgctgaagcattacgcgatcaagatgaacaaaccgtacatc
tacgggccgacgtcacagaacgagcgtattcagatcctgcagaacttcaaattcaacccg
aaagtgaacacaatcttcgtgtcgaaggtggctgatacgagcttcgatttgccggaagcg
aacgtgctgattcagatctcctcgcacggtggatcgcgtcgtcaggaggcgcagcgtttg
ggtcgtatcttgcgtgcgaagaagggcgctatcgcggaagagtacaacgcgttcttctat
acgctcgtgtcgcaggacacgctcgagatgggatattcgcgcaagcgccagcggttcctg
gtgaaccagggctacagctacaaggtgatcacgcatctggccggcatggagagcgatccg
gatctgttctacaagacgcgcgaagagcagggccagctgctgcagcaggtgctgtccgcg
accgatatggactgtgaggatgagcgtatgccgggcgatgggacgggcgtgccacggccg
ggtggatcgaagcgtaccggcgggcttagctcgatggccggtgcggatgatgcgatctac
tacgagcgcaagaagtcggcccatcagcatccactgtttaagaagttccgctgctag
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