Anopheles gambiae (malaria mosquito): 133392816
Help
Entry
133392816 CDS
T01036
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133392816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aga03021
]
133392816
Enzymes [BR:
aga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133392816
Transcription machinery [BR:
aga03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133392816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
HMG_box
DUF5499
Motif
Other DBs
NCBI-GeneID:
133392816
NCBI-ProteinID:
XP_061510533
LinkDB
All DBs
Position
3:93597852..93603783
Genome browser
AA seq
1746 aa
AA seq
DB search
MTIVNLDPTNLEFSVFTTEDVRKISVMKVESYRSFDDMGNPVKSGLYDPAMGPCGFGEIC
ATCTRDVSTCEGHFGLIELDLVVYNPFFMRTVSSLLRITCMSCARVQLQDGAKSLLELQL
RLADAGYIVEAEEIDVYKTKLQANPHDAIPEEITYYEDLLRKEPYNKLGNTKLSSTIRTA
IVNSTLRQESKRCIHCTKMLQRVRITDKKLTIRWTQADKKAFLEEKGNKNPTDEEVKSST
EVVLARESQMFLRKLYEQEGTLLSLLFPVLNSAKHEMTQYPTDIFFMEVVPVPPCKMRPV
RRANRVPGRSSVMEHAQSVLLRNIFVANATVRAILLGSEGKEKPEGMSDATFGQLKSIHQ
QAKGATVTEKLFHAWCDLQSNVDQLLDVEKLSGGKQVVTFGLKQLIEKKAGLIRMHMMGK
RVNHAARTVITPDPNIGVEEIGIPTRFAKKLTYPVPVTPWNVAELRQWVMNGPDVYPGAN
MIEDANGRVSKISSTNVTQRQSLAKTLLTPHGAGAESSGDDTIKIVHRHLQNGDILLLNR
QPTLHRPSIMAHRAKILGGEKIFRLHYSNCKSYNADFDGDEMNAHLPQNEVARAEAYGLV
AVPYQYLVPKDGTPLGGLIQDHIVSAVKLFIRGKFFNREDYQQLVFQALSNKKGNIELLP
PSILKPVRLWSGKQIISTIIKNSTPKGMPYINLVGKSKLNNKHWCVLPARPWEYGGTPLR
ENELSESEVFIRQGELLSGILDKNHFGATPYGLIHCMYELYGGVCSTALLSSLSRLFTYY
LQWEGFTLGVRDILVQSKADRKRSRIIRECRAVAGHEAATSALELPASVSRDELAQRMRE
AYAKNPKFRAILDRKYKTVLDTYTNRINNACLPEGLISKFPVNNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGKRPPLMISGRSLPSFADFDTSPKSGGFIDGRFMTGIQPQEFFFHCM
AGREGLIDTAVKTSRSGYLQRCLVKHLEGLSVHYDMTVRDSDGSVIQYMFGEDGMDIAKT
QFIGNEKQTRFLDMNRDVIVQPEVLKRLQTSRDEDPLNEALKKHVKKMKRWTKQNGGGPT
EVQRVRTSAFALFSADHAEALRAELPNPDKVKKSGRTKLTEKLLKRWGKLEPAARREYVR
RAAHCPDPVGAVFPPDSHYGVLSEKLEAMVRKYKRTEQPLHNIDELMQVKGSASLAAPGE
PVGVLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMCAAAEIKTPSMEIPFL
PHRKPERLKAVAEKLRKSLNRVTVADVLETINIKSKLVVHPSRGMQHTIRFNFLPQDAYD
HDYCVTPSGILRHMSRKFFKAMFAAIRRAESAKNVLIDTEMQEGKSKKHKKGADTEEDDE
IDRQEPEKVDKSEKAVYSDSDSDSDDGGTPAVDGDASDAKNRGKTKDEHDYDEDDENDAD
ADAAGASSDDSGVSEDEQEDEKEAQKQPAAGGKQKKKLPSAKASRSRCIEEALIEEYEKE
QDELGQELAAMPGAEETLNEAEETMFLAQVNAQVSKFQYDRVAKRWCQIVLHMPLKLKEI
DFTKVLRDVAAKSVIWEVPRIKRAITYMQNDQLYLRTDGTNMSAMTAHAKVLDLNRLYTN
DIHAMANRYGIEAASRVIVKEIQNVFSVYGITIDPRHLLLVADYMTASGRYQAMNRMAME
SSVSPLQQISFESSLKFLKEALLKGTNDRLESPSSRLIVGQPCKVGTGSFTLYSSALKDY
AEASMA
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtgaaccttgatccaaccaacctcgagttctccgtctttacgacggaggac
gtgcggaagatcagcgtgatgaaggtggaatcgtaccggtcgttcgatgacatgggcaac
ccggtcaagtccgggctgtacgatccggcgatgggtccgtgcgggttcggtgaaatctgt
gcgacgtgcacccgtgacgtcagcacgtgcgagggccacttcgggctgatcgagctggac
ctggtcgtgtacaatccgttcttcatgcgcacagttagcagtctgctgcgcattacctgc
atgtcgtgcgcccgggtgcagctgcaggacggagcgaaatcgttgctcgagctgcagctg
cggctggccgacgccggctacatcgtcgaggcggaagagatcgacgtgtacaagacgaag
ctgcaggccaatccgcacgatgccataccggaggagattacgtactacgaggacctgctg
cgcaaggagccgtacaacaagctcggcaacacgaagctctccagcacgatccggaccgcg
atcgtgaacagcacgctcaggcaggaatcgaaacgttgcatccactgtacgaaaatgctg
cagcgtgttcgcattaccgacaaaaaactaacgatacggtggacgcaagcggacaagaag
gcgtttctcgaggagaagggaaacaagaacccaaccgacgaggaggtaaaatcgtccacg
gaggtggtgctcgcccgcgaaagccagatgtttctgcgcaagctgtacgagcaggaaggc
acgctgctgtcgctgctctttcccgtactgaactcggccaagcacgagatgacccaatat
ccgacggacattttcttcatggaggtggtaccggtgccgccgtgcaagatgcgccccgtc
cgccgagcgaaccgcgtacccggccgctcctcggtaatggagcacgcgcagtcggtgctg
ctgcgcaacatcttcgtcgcgaacgcaaccgtgcgggccattctgctcggcagcgaggga
aaggagaaaccggaaggcatgagcgatgcgacgttcggccagctgaaatcgatccaccag
caggcgaagggcgcaaccgtgacggagaagctgtttcacgcctggtgcgatctgcagtcg
aacgtcgaccagctgctggacgtggagaagctgtccggcggcaagcaggtggtcacgttc
gggctgaagcagctgatcgagaagaaggccgggctgatccggatgcacatgatgggcaag
cgggtgaaccatgcggcccgcacggtcatcacgcccgatccgaacatcggggtggaggag
atcggcataccgacgcggttcgcgaagaagctcacctacccggtccccgtgacgccctgg
aatgtggccgagctgcgccagtgggtgatgaacgggccggatgtctatccgggtgcgaac
atgatcgaagatgcgaacgggcgggtaagcaaaatatcgtccacgaacgtgacgcagcgc
caatcgctggccaaaacgctgctaacgccgcacggtgccggcgcggagtcgagcggtgac
gatacgatcaagatcgtccatcggcatctgcagaacggggatatactgctgctcaaccgg
cagcccacgctgcatcggccgagtataatggcgcaccgggcgaagattctcggtggggag
aagattttccgcctgcactactccaactgcaagtcgtacaatgcggactttgatggggat
gaaatgaatgctcatctgccgcagaacgaggtggctcgggcggaggcgtacgggttggtg
gcggtgccgtaccagtacctcgtgccgaaggacggcacaccgctgggtggtttgattcag
gatcatatcgtatcggcggtgaagcttttcatacgcggcaagtttttcaatcgggaggac
taccagcagctagtgtttcaggcgctgagcaacaagaagggcaatattgagctgctgcca
ccgtccatcctaaagccggtccgactgtggtccggcaagcaaatcatttcgaccatcatc
aagaacagcacaccgaagggcatgccgtacatcaacttggtgggaaagtcgaagctaaac
aacaagcattggtgtgtgcttcccgcccgcccctgggagtacggtggcacaccgctccgc
gagaacgagctgtccgaatcggaggtgttcatccggcagggtgagctgctgagcggcatc
ctcgacaagaaccacttcggcgccacaccgtacggtctgatccactgcatgtacgagctg
tacggaggcgtctgctccaccgctctcctttcgtccctgtcgcggctcttcacctactac
ctgcagtgggaagggttcacgctgggcgtacgggacattctggtgcagagcaaggcggat
cggaagcggtccagaattatacgcgagtgccgcgcagtggcagggcacgaagcggccacc
tcagccctcgagctgccggcgagcgtttcgcgcgacgagctggcccagcgcatgcgggaa
gcgtacgccaagaatccaaagtttcgcgccatactcgaccggaagtataagaccgtgctc
gatacgtacaccaacaggattaacaacgcatgcctgccggaaggcttgatcagcaagttt
ccggtgaacaatctgcagctgatggtacagtcgggtgcgaagggttcgaccgtcaacacg
atgcaaatctcgtgtctgctcgggcagatcgagctggagggcaaacgacccccgctcatg
atttccggccgttcgctgccgagctttgccgattttgatacgtcaccgaagtcgggcggc
tttatcgacggccggtttatgacgggcatacagccgcaggagttcttcttccactgtatg
gcgggtcgggagggtctgatcgatacggcggtgaaaactagccgctccggctacctgcag
cgctgtctggtgaagcatctcgagggcctgtcggtgcactacgacatgacggtgcgggac
agcgacggcagcgtgatccagtacatgttcggcgaggacggtatggacattgcgaagacg
cagttcatcggtaacgagaagcaaacgcgctttctcgacatgaaccgggacgtgatcgtg
cagccggaggtgttgaagcggctgcagacgtcccgcgacgaggatccgctgaacgaggcg
ctgaagaagcacgtcaaaaagatgaaacgctggacgaagcagaatggcggagggccgacg
gaggtgcagcgcgttcgcacgtccgcttttgctctgttttcggccgaccatgcggaagcg
ttgcgggcggagctcccgaacccggacaaggtgaaaaagtcgggccgtacgaagctgacg
gagaagctgctcaagcggtggggcaagctggagccggcggctcggcgcgagtatgtgaga
agggcggcccactgtcccgatccggtcggtgccgtctttccgcccgattcgcactacggc
gtgctgtcggagaagctggaggcgatggtgcgcaagtacaagcgcaccgagcagccgctc
cacaacatcgacgagctgatgcaggtgaagggcagtgcgtcgctggcggcgccgggtgaa
ccggtcggcgtgctggcggcccaatcgatcggcgaaccgtctacgcagatgacgctcaac
acgttccacttcgcggggcgcggtgagatgaacgtgacgctcggtattccgcgtctgcgc
gagattctgatgtgtgcggcggccgagatcaagacaccgtcgatggagataccgttcctg
ccgcaccgcaaaccggagcggctgaaggcggtggccgagaagctgcgcaaatcgctcaac
cgtgtcacggtggcggatgtgctggaaactattaatatcaagtcgaagctggtggtgcat
ccttcgcgcggcatgcagcacaccatacgcttcaacttccttccgcaggacgcgtacgat
cacgactactgcgttacgccgagcggcatccttcggcacatgtcgcgcaaatttttcaaa
gcaatgtttgccgccattcggcgagcggaatcggcgaagaatgtgctaatcgacactgaa
atgcaggaaggtaaatcgaaaaagcataagaagggggctgacactgaagaggacgacgag
atcgatcgccaggagccggagaaagttgataagagcgagaaggctgtgtattcggatagc
gacagtgactcggacgatggtggcacgccggctgttgatggggatgcatcggatgcgaag
aaccggggcaagaccaaggacgagcacgattacgacgaggacgacgagaacgatgcggat
gcggatgctgcgggggccagctccgacgactcgggcgttagcgaggacgagcaagaggat
gagaaggaggcgcaaaagcagccagcagcggggggaaagcaaaagaaaaagcttccgtcc
gccaaggcatcgaggagtcgctgcatcgaggaggcgctgattgaggagtacgaaaaggag
caggacgagctggggcaggagctggcagcgatgcccggcgccgaggaaacgctgaatgaa
gcggaagagaccatgtttttggcacaggtgaacgcgcaggtcagcaagttccagtatgat
cgggtcgccaaacggtggtgccagatcgtgctgcacatgccgctgaagctgaaggagatc
gacttcaccaaggtgctgcgcgatgtggccgccaaatcggtgatctgggaggtgccccgg
atcaagcgcgccatcacgtacatgcagaacgatcagctgtacctgcgaacggacggtacg
aacatgtcggcgatgacggcgcacgcgaaggtgctggacctgaaccggctgtacacgaac
gacatccacgcgatggccaaccggtacggcatcgaggcggcgtcgcgcgtgatcgtgaag
gaaatacagaacgtgttcagcgtgtacggcatcacgatcgatccgcgccatctgctgctg
gtggcggactacatgacggcgagcggccggtaccaggcgatgaaccgcatggcgatggag
tcttcggtctcgccgctgcagcagatatcgttcgaatcgtcgctcaagttcctgaaggag
gcgctgctgaagggcacgaacgatcggctggagtcaccctcgtccaggctgatcgtgggc
cagccgtgcaaggtgggcacgggctcgtttacgctctactcgtccgccctgaaggactat
gccgaggcgtcaatggcataa
DBGET
integrated database retrieval system
