Anopheles gambiae (malaria mosquito): 133392982
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Entry
133392982 CDS
T01036
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133392982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aga03019
]
133392982
03041 Spliceosome [BR:
aga03041
]
133392982
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133392982
Spliceosome [BR:
aga03041
]
Complex B
Other components
Prp19-related factors
133392982
Complex C
133392982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_10
Mad3_BUB1_I
ARM_TT21_C
PPR
ARM_TT21
NRDE-2
DUF688
SNAP
Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID:
133392982
NCBI-ProteinID:
XP_061511712
UniProt:
A0A1S4H931
LinkDB
All DBs
Position
3:complement(98313588..98316488)
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AA seq
864 aa
AA seq
DB search
MPISSEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDGEYEEVNNAFERALVFMHKMPRIWMDYCAFMTAQ
CKITRTRQVFDRALRALPITQHHRIWPLYLDFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNEHFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMELLERNPNPTEDQEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLADARVVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYEEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLSRYGGQKLERSRDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAADIYGIPRTRQIYEKAIEVLPEA
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTTGEPPKDAMRALEVKAAETTARAIAAVGATG
GNIMFVRGETQGGAAKEDRVVNPDEIDIDDEEEEEEDDDDEAAGDENGEDIAKKIPIERQ
SIPAKVFGSLRREVEEKEENDMAE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcatcggaagtgaatctggcggaagtgttcttcaacgaggaagacttgccg
tacgaggaggagatccttcgcaatgcctactcggtgaagcactggatgcggtacgtggag
cataagcgcaatgcgccccggttcgtcatcaacaccgtgttcgagcgggccctgaaggag
ctgcccggctcgtacaagctgtggtacaactatctcaaaaccctgcgcaagcaggtgaag
ggaaagtgcatcacggacggcgagtacgaggaggtgaacaatgcgttcgagcgagcgctc
gtcttcatgcacaagatgccccgcatctggatggactattgcgcgttcatgacggcccag
tgcaagataacgcgcacgcggcaggtgtttgatcgggcgctgcgtgcgctcccgattacg
cagcaccatcgcatctggccgctgtacttggacttcctcaagcggttcgacatcccggag
acggcggtccgggtgtggcgccgctacctgaagctctgcccggaggacgcggaagagtac
gtggagtttctgcagtcgatcggccatctggacgaggcggcccagcagctggccagcatc
gtggacaacgagcacttcgtgtcgaagcatggcaaatcgaaccaccagctgtggaacgag
ctgtgcgagctgatttccaaaaacccggacaaagtgcactcgctcaatgtggacggcatc
atccgcggtggactgcggcggtacacggatcagctcggccacctgtggaactcgctggcc
gggtattacgtgcgcagcgggctgtttgatcgcgcacgcgacatctacgaggaagcgatc
caaacggtcacgacggtgcgcgactttagccaggtgttcgatgcgtacgcgcagttcgag
gagctgagcctgagcaaggtgatggagctgctggagcgcaacccgaacccgaccgaggat
caggagatcgatgtggagctgcggatggcacggttcgagtatctgatggagcgccggctg
ctgctgctgaacagtgtgctgctgcgccagaacccgcacaacgtggccgagtggcacaag
cgggtggagctgtacgagggcaagccgcacgaaatcatcaacacctacacggaggcggtc
cacacggtgcagccgaagctggccgtcggcaaactgtacacgctgtgggtggcattcgcc
aagttttacgaaaccaacaagcagctggccgacgcgcgcgtcgtgttcgaaaaggccgtc
caggtggactacctgaaggtggacgagctggccagcgtgtggtgcgagtgggccgagatg
gaaattcgccaggagcagtacgaggaggcgctgcggatcatgcagcgcgcgacggcgatg
ccgaagcgaaaggtggcctaccacgacgacaccgagacggtgcagatgcgcgtgtacaag
tcgctcaagctgtggtcgatgtacgcggatctggaggaaagcttcggcacgttcaagacg
tgcaagcaggtgtacgatcgcatcatcgatctgaagatctgcacgccccagatcatcatc
aactatggcatgtttctcgaggagcacaactacttcgaggaggcgttcaaggcgtacgag
aagggcatcgcgctgttcaagtggcccaacgtgtacgacatctggaacacgtacctgacc
aagttcctgtcccggtacggcggccagaagctggagcgatcgcgcgatctgttcgagcag
tgtctggacggctgcccgcccgagctggccaagaacctttacctgctgtacgcgaaactg
gaggagcagcacgggctggcccgccacgcaatggccgtgtacgagcgagccacgaccgcc
gtcaaggaggaggaaatgtacgccatgtttaatctgtacatcaagaaggcggccgatatc
tacggcataccccggacgcgccagatctacgagaaggcgatcgaggtgctgcccgaggcg
gactcgcgcaagatgtgcgtcctgttcgccgagatggaaacgaagctgggggaaatcgat
cgcgcacgggccatctacgcacactgcagccaaatgtgcgatccgcgcgtaacggccgac
ttctggcagacgtggaaagagttcgaaatccggcacggcaacgaggacacgatgagggaa
atgctgcgcatcaagcgctcgatccaggcgacgtacaacacgcagatcaacatgatgtcg
gcggccctgatcaacgcagccgttacgaccggcgaaccaccgaaggatgcgatgcgtgcg
ctggaggtgaaggcggccgaaacgacggcacgtgcgatagcggcggtcggcgcgaccggc
ggcaacattatgtttgtgcggggcgaaacgcagggaggagcggcgaaggaagatcgagtg
gttaatcccgacgaaattgacatcgacgatgaggaggaggaggaggaggacgacgacgat
gaagctgcgggcgatgagaatggggaggacatcgccaaaaagattccgatcgagcgccaa
agcattccagcgaaggtgtttggcagcttgcgtcgggaggtagaggagaaggaagagaac
gatatggcagagtag
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